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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 144449581 | 144449930 | TRUE | OK | 64.0 | 0.00823 | 2.586e-07 | 0.0002674 | -1.121 | -0.560 | 66.1 | 100.1 | 83.6 | 47.7 | 39.2 | 47.4 |
E002 | chr8 | 144449930 | 144450575 | TRUE | OK | 405.1 | 0.012 | 0.002359 | 0.2091 | -0.608 | -0.304 | 374.7 | 550.6 | 435.1 | 366.3 | 324.1 | 380.0 |
E003 | chr8 | 144450575 | 144450770 | TRUE | OK | 233.5 | 0.00893 | 0.0813 | 0.6786 | -0.325 | -0.162 | 227.8 | 290.9 | 205.5 | 229.3 | 219.4 | 228.2 |
E004 | chr8 | 144451119 | 144452035 | TRUE | OK | 1087.0 | 0.00985 | 0.2286 | 0.7685 | 0.173 | 0.086 | 794.7 | 1249.2 | 825.9 | 1070.2 | 1333.8 | 1248.2 |
E005 | chr8 | 144452035 | 144452358 | TRUE | OK | 682.9 | 0.00162 | 8.214e-05 | 0.02714 | 0.329 | 0.164 | 551.2 | 595.4 | 553.0 | 695.0 | 866.7 | 836.3 |
E006 | chr8 | 144452358 | 144452570 | TRUE | OK | 782.3 | 0.00345 | 0.8242 | 0.9563 | 0.025 | 0.013 | 717.8 | 727.8 | 711.1 | 748.6 | 917.6 | 871.1 |
E007 | chr8 | 144453221 | 144453460 | TRUE | OK | 793.2 | 0.00165 | 0.4297 | 0.8329 | -0.062 | -0.031 | 721.8 | 790.4 | 735.3 | 727.7 | 934.2 | 849.8 |
E008 | chr8 | 144453460 | 144457641 | TRUE | OK | 1384.5 | 0.0239 | 0.251 | 0.7756 | 0.342 | 0.171 | 1223.6 | 1012.5 | 1260.0 | 1108.9 | 1886.1 | 1815.7 |
E009 | chr8 | 144457641 | 144457928 | TRUE | OK | 124.6 | 0.0259 | 0.5146 | 0.8606 | 0.205 | 0.103 | 116.3 | 79.2 | 124.9 | 101.3 | 144.0 | 181.8 |
E010 | chr8 | 144462282 | 144462415 | TRUE | OK | 277.4 | 0.0251 | 0.2698 | 0.7823 | -0.271 | -0.135 | 276.1 | 301.3 | 266.9 | 276.0 | 357.4 | 186.6 |
E011 | chr8 | 144462415 | 144462861 | TRUE | OK | 175.4 | 0.388 | 0.2346 | 0.7706 | -0.882 | -0.441 | 204.1 | 250.3 | 186.3 | 200.5 | 192.9 | 18.4 |
E012 | chr8 | 144463816 | 144464274 | TRUE | OK | 244.0 | 0.011 | 0.1434 | 0.7318 | -0.311 | -0.155 | 210.0 | 336.8 | 206.5 | 213.4 | 233.1 | 263.9 |
E013 | chr8 | 144464274 | 144464459 | TRUE | OK | 173.6 | 0.0162 | 0.5663 | 0.877 | -0.174 | -0.087 | 115.4 | 232.5 | 165.2 | 155.9 | 169.4 | 203.0 |
E014 | chr8 | 144464459 | 144464577 | TRUE | OK | 167.2 | 0.00909 | 0.1567 | 0.7375 | -0.289 | -0.145 | 126.2 | 226.3 | 161.2 | 147.9 | 169.4 | 172.1 |
E015 | chr8 | 144464577 | 144464580 | TRUE | OK | 108.7 | 0.00925 | 0.1246 | 0.7198 | -0.329 | -0.164 | 88.7 | 152.2 | 97.7 | 99.3 | 111.6 | 102.5 |
E016 | chr8 | 144464580 | 144464612 | TRUE | OK | 132.1 | 0.013 | 0.5098 | 0.8592 | -0.183 | -0.092 | 100.6 | 182.5 | 108.8 | 128.1 | 138.1 | 134.4 |
E017 | chr8 | 144464612 | 144464808 | TRUE | OK | 50.7 | 0.0144 | 0.2448 | 0.7739 | -0.296 | -0.148 | 39.4 | 70.9 | 46.3 | 29.8 | 59.7 | 58.0 |
E018 | chr8 | 144464808 | 144465035 | TRUE | OK | 231.5 | 0.00267 | 0.2953 | 0.7901 | -0.119 | -0.059 | 207.1 | 254.4 | 209.5 | 191.6 | 248.7 | 277.5 |
E019 | chr8 | 144465035 | 144465096 | TRUE | OK | 151.4 | 0.00337 | 0.4707 | 0.8464 | -0.093 | -0.046 | 144.0 | 143.9 | 147.1 | 130.1 | 163.5 | 179.8 |
E020 | chr8 | 144465096 | 144465207 | TRUE | OK | 116.3 | 0.00371 | 0.2244 | 0.7666 | -0.174 | -0.087 | 120.3 | 117.8 | 105.8 | 92.3 | 127.3 | 134.4 |
E021 | chr8 | 144465207 | 144465352 | TRUE | OK | 113.3 | 0.0052 | 0.03415 | 0.5707 | -0.338 | -0.169 | 103.5 | 141.8 | 108.8 | 74.5 | 122.4 | 128.6 |
E022 | chr8 | 144465352 | 144465409 | TRUE | OK | 91.3 | 0.00316 | 0.04612 | 0.6143 | -0.309 | -0.154 | 78.9 | 103.2 | 100.7 | 73.5 | 94.0 | 97.7 |
E023 | chr8 | 144465409 | 144465428 | TRUE | OK | 57.5 | 0.00409 | 0.09518 | 0.6942 | -0.315 | -0.157 | 47.3 | 68.8 | 62.4 | 45.7 | 59.7 | 60.9 |
E024 | chr8 | 144465428 | 144465430 | TRUE | OK | 39.6 | 0.005 | 0.9346 | 0.9845 | 0.018 | 0.009 | 28.6 | 43.8 | 37.3 | 36.7 | 46.0 | 45.4 |
E025 | chr8 | 144465430 | 144465434 | TRUE | OK | 39.0 | 0.00517 | 0.9938 | 0.9985 | -0.002 | -0.001 | 27.6 | 43.8 | 37.3 | 35.7 | 46.0 | 43.5 |
E026 | chr8 | 144465434 | 144465489 | TRUE | OK | 34.7 | 0.00705 | 0.9324 | 0.984 | -0.026 | -0.013 | 23.7 | 41.7 | 32.2 | 34.7 | 43.1 | 32.9 |
E027 | chr8 | 144465489 | 144465570 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0266 | 0.5978 | NA | NA | NA | 5.9 | 8.3 | 6.0 | 3.0 | 5.9 | 10.6 |
E028 | chr8 | 144465570 | 144465648 | TRUE | OK | 10.2 | 0.0457 | 0.5646 | 0.8764 | -0.312 | -0.156 | 4.9 | 14.6 | 12.1 | 8.9 | 5.9 | 14.5 |
E029 | chr8 | 144465648 | 144465667 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.034 | 0.8919 | NA | NA | NA | 2.0 | 4.2 | 5.0 | 4.0 | 3.9 | 5.8 |
E030 | chr8 | 144465667 | 144465677 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0671 | 0.5909 | NA | NA | NA | 2.0 | 2.1 | 2.0 | 2.0 | 2.0 | 1.0 |
J031 | chr8 | 144450770 | 144452358 | TRUE | OK | 118.2 | 0.0108 | 0.0974 | 0.6964 | -0.354 | -0.177 | 126.2 | 143.9 | 100.7 | 119.1 | 114.6 | 104.4 |
J032 | chr8 | 144452570 | 144453221 | TRUE | OK | 396.8 | 0.00289 | 0.959 | 0.9905 | -0.005 | -0.002 | 374.7 | 376.4 | 353.5 | 379.2 | 446.6 | 450.5 |
J033 | chr8 | 144453460 | 144462282 | TRUE | OK | 190.0 | 0.00643 | 0.8386 | 0.9602 | -0.029 | -0.015 | 167.6 | 189.8 | 176.3 | 191.6 | 241.9 | 173.1 |
J034 | chr8 | 144453460 | 144464459 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.736 | 0.7966 | NA | NA | NA | 0.0 | 7.3 | 0.0 | 0.0 | 2.0 | 4.8 |
J035 | chr8 | 144453460 | 144464808 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.147 | 0.6589 | NA | NA | NA | 1.0 | 0.0 | 4.0 | 1.0 | 1.0 | 1.9 |
J036 | chr8 | 144464612 | 144464808 | TRUE | OK | 89.7 | 0.00838 | 0.5582 | 0.8741 | -0.137 | -0.069 | 70.0 | 115.7 | 76.5 | 91.3 | 91.1 | 93.8 |
J037 | chr8 | 144465096 | 144465207 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.1 | 0.0459 | 0.3663 | NA | NA | NA | 4.9 | 9.4 | 6.0 | 1.0 | 5.9 | 9.7 |
J038 | chr8 | 144465096 | 144465352 | TRUE | OK | 35.6 | 0.0271 | 0.8718 | 0.9689 | 0.024 | 0.012 | 24.7 | 25.0 | 48.3 | 35.7 | 43.1 | 36.7 |
J039 | chr8 | 144465096 | 144465409 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0658 | 0.9397 | NA | NA | NA | 4.9 | 2.1 | 3.0 | 1.0 | 7.8 | 3.9 |
J040 | chr8 | 144465096 | 144465570 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.8 | 0.0648 | 0.4879 | NA | NA | NA | 3.0 | 11.5 | 11.1 | 6.9 | 3.9 | 10.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000187954.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |