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Normalized Counts Table (ENSG00000137171.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr6	43040776	43041124	TRUE	OK	133.9	0.0235	0.4997	0.8556	-0.204	-0.102	130.2	87.6	127.9	173.7	138.1	146.0
E002	chr6	43043057	43043508	TRUE	OK	139.6	0.00462	0.00334	0.2455	-0.456	-0.228	139.0	117.8	136.0	141.0	144.9	158.6
E003	chr6	43059025	43059271	TRUE	OK	22.8	0.0159	0.2187	0.7644	-0.389	-0.194	26.6	16.7	20.1	16.9	33.3	23.2
E004	chr6	43059404	43059630	TRUE	OK	128.9	0.0106	0.0302	0.5525	-0.451	-0.225	117.3	141.8	103.7	140.0	123.4	147.0
E005	chr6	43059630	43059646	TRUE	OK	10.8	0.0156	0.07781	0.6747	0.785	0.392	5.9	5.2	7.1	11.9	14.7	20.3
E006	chr6	43059646	43059651	TRUE	OK	11.8	0.0139	0.02528	0.5268	0.957	0.478	5.9	5.2	7.1	15.9	15.7	21.3
E007	chr6	43059651	43059652	TRUE	OK	20.9	0.0162	0.03025	0.5528	0.770	0.385	12.8	7.3	15.1	24.8	26.4	38.7
E008	chr6	43059652	43059685	TRUE	OK	41.3	0.0104	0.007365	0.3482	0.698	0.349	25.6	16.7	30.2	58.6	53.9	62.8
E009	chr6	43059856	43059882	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0326	0.1223	NA	NA	NA	2.0	2.1	2.0	4.0	7.8	7.7
E010	chr6	43059882	43059886	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0366	0.2432	NA	NA	NA	2.0	2.1	2.0	4.0	7.8	4.8
E011	chr6	43059886	43059889	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0431	0.1409	NA	NA	NA	2.0	2.1	2.0	4.0	10.8	4.8
E012	chr6	43059889	43059894	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0429	0.1063	NA	NA	NA	3.0	2.1	2.0	4.0	12.7	6.8
E013	chr6	43059894	43060159	TRUE	OK	43.0	0.00548	0.07785	0.6748	0.402	0.201	31.6	22.9	32.2	51.6	64.6	55.1
E014	chr6	43060159	43060182	TRUE	OK	31.5	0.00877	0.2731	0.783	0.293	0.147	27.6	17.7	21.2	40.7	37.2	44.5
E015	chr6	43060182	43060186	TRUE	OK	27.0	0.00713	0.115	0.7122	0.439	0.220	19.7	14.6	19.1	32.8	35.3	40.6
E016	chr6	43060186	43060238	TRUE	OK	32.0	0.00687	0.1336	0.7255	0.395	0.198	21.7	17.7	25.2	32.8	45.0	49.3
E017	chr6	43060238	43060276	TRUE	OK	22.3	0.00814	0.3651	0.8121	0.274	0.137	17.7	13.6	16.1	25.8	27.4	32.9
E018	chr6	43060276	43060517	TRUE	OK	34.8	0.011	0.4085	0.8266	0.229	0.114	30.6	21.9	23.2	38.7	39.2	55.1
E019	chr6	43060517	43060605	TRUE	OK	27.4	0.00877	0.1376	0.7283	0.425	0.212	21.7	18.8	14.1	32.8	33.3	43.5
E020	chr6	43061061	43061310	TRUE	OK	38.8	0.0545	0.2015	0.7585	0.624	0.312	19.7	16.7	34.2	25.8	61.7	74.4
E021	chr6	43061310	43061583	TRUE	OK	185.2	0.00281	0.01068	0.401	0.331	0.165	125.2	128.3	138.0	230.3	256.6	233.0
E022	chr6	43061583	43061587	TRUE	OK	94.8	0.00547	0.05287	0.6328	0.345	0.172	61.1	74.0	62.4	124.1	136.1	111.2
E023	chr6	43061587	43061593	TRUE	OK	97.3	0.005	0.02328	0.5145	0.393	0.197	62.1	74.0	62.4	130.1	136.1	118.9
E024	chr6	43062527	43062885	TRUE	OK	21.5	0.00765	0.7706	0.9414	0.091	0.046	17.7	16.7	15.1	21.8	30.4	27.1
E025	chr6	43062885	43062916	TRUE	OK	13.5	0.0107	0.8279	0.9572	0.084	0.042	9.9	10.4	11.1	13.9	18.6	17.4
E026	chr6	43062916	43062933	TRUE	OK	99.9	0.00687	0.01044	0.3978	0.479	0.239	59.2	73.0	64.5	140.0	142.0	120.9
E027	chr6	43062933	43062982	TRUE	OK	116.6	0.00385	0.004319	0.2765	0.448	0.224	72.0	83.4	77.6	152.9	168.4	145.0
E028	chr6	43062982	43063147	TRUE	OK	197.3	0.0042	0.005696	0.3127	0.396	0.198	127.2	142.9	137.0	243.2	296.7	236.9
E029	chr6	43065391	43065619	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0837	0.8906	NA	NA	NA	2.0	4.2	11.1	5.0	11.8	6.8
E030	chr6	43065619	43065701	TRUE	OK	148.5	0.0025	0.3088	0.794	0.136	0.068	104.5	112.6	120.9	167.8	205.6	179.8
E031	chr6	43066305	43066356	TRUE	OK	112.1	0.00282	0.2684	0.7818	0.165	0.083	83.8	80.3	87.6	127.1	157.7	136.3
E032	chr6	43066356	43066458	TRUE	OK	125.0	0.00292	0.6565	0.9064	0.066	0.033	96.6	88.6	106.8	134.0	171.4	152.8
E033	chr6	43066458	43066481	TRUE	OK	83.2	0.00857	0.905	0.9774	0.032	0.016	75.9	53.2	67.5	78.4	119.5	104.4
E034	chr6	43066481	43066522	TRUE	OK	81.9	0.0142	0.5669	0.8772	0.141	0.071	74.0	44.8	66.5	78.4	118.5	109.3
E035	chr6	43066522	43066525	TRUE	OK	75.4	0.0183	0.5563	0.8736	0.163	0.081	68.0	39.6	61.4	68.5	108.7	106.4
E036	chr6	43066995	43067079	TRUE	OK	109.0	0.00366	0.2402	0.7723	0.190	0.095	87.8	71.9	82.6	113.2	156.7	142.1
E037	chr6	43067079	43067083	TRUE	OK	70.6	0.00379	0.4937	0.8537	0.124	0.062	56.2	57.3	47.3	80.4	96.9	85.1
E038	chr6	43067083	43067397	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0197	0.7137	NA	NA	NA	3.9	7.3	8.1	7.9	9.8	7.7
E039	chr6	43070345	43070353	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0865	0.5449	NA	NA	NA	2.0	11.5	6.0	3.0	8.8	9.7
E040	chr6	43070353	43070455	TRUE	OK	121.8	0.00286	0.3821	0.8177	0.131	0.066	86.8	101.1	89.6	122.1	168.4	162.4
E041	chr6	43070455	43070691	FALSE	LOW_COUNTS_INDEP_FILTER	9.5	0.0276	0.9152	NA	NA	NA	3.0	11.5	8.1	12.9	9.8	11.6
E042	chr6	43070691	43070865	TRUE	OK	151.4	0.00234	0.2379	0.7715	0.156	0.078	109.4	113.7	118.9	164.8	194.9	206.9
E043	chr6	43071274	43071374	TRUE	OK	122.2	0.00254	0.1673	0.7429	0.196	0.098	82.8	97.0	91.7	137.0	158.6	166.3
E044	chr6	43071566	43071619	TRUE	OK	106.2	0.00291	0.4722	0.8469	0.110	0.055	82.8	84.5	76.5	115.2	134.2	144.1
E045	chr6	43071851	43071922	TRUE	OK	121.4	0.00305	0.4847	0.851	0.106	0.053	91.7	94.9	92.7	124.1	154.7	170.2
E046	chr6	43072146	43072243	TRUE	OK	135.8	0.00384	0.4616	0.8433	0.112	0.056	97.6	119.9	94.7	142.0	172.4	188.5
E047	chr6	43072243	43072255	TRUE	OK	93.0	0.00633	0.8593	0.9656	0.038	0.019	73.0	84.5	62.4	89.4	116.5	132.5
E048	chr6	43072740	43072823	TRUE	OK	12.1	0.0484	0.06934	0.6616	-0.844	-0.422	12.8	15.6	11.1	3.0	17.6	12.6
E049	chr6	43072823	43072887	TRUE	OK	124.9	0.00526	0.6697	0.9102	-0.067	-0.033	91.7	121.0	94.7	117.1	157.7	167.3
E050	chr6	43072887	43072963	TRUE	OK	127.0	0.00367	0.4273	0.8322	-0.119	-0.060	90.7	123.0	104.8	125.1	154.7	163.4
E051	chr6	43072963	43072964	TRUE	OK	102.5	0.0038	0.8201	0.9551	-0.039	-0.020	68.0	97.0	84.6	110.2	125.3	129.6
E052	chr6	43073222	43073338	TRUE	OK	154.9	0.003	0.3832	0.8181	-0.120	-0.060	117.3	149.1	121.9	158.8	189.0	193.4
E053	chr6	43073338	43073647	TRUE	OK	21.2	0.03	0.9672	0.9923	-0.047	-0.023	12.8	28.2	11.1	20.8	25.5	29.0
E054	chr6	43073683	43073901	TRUE	OK	25.9	0.0086	0.3055	0.7932	0.300	0.150	16.8	24.0	14.1	24.8	38.2	37.7
E055	chr6	43073901	43073965	TRUE	OK	131.8	0.00349	0.6621	0.9082	-0.059	-0.029	107.5	116.8	98.7	123.1	172.4	172.1
E056	chr6	43074621	43074908	TRUE	OK	162.5	0.0055	0.5897	0.8846	-0.082	-0.041	120.3	158.5	122.9	151.9	212.5	208.8
E057	chr6	43074908	43075087	TRUE	OK	55.4	0.00656	0.09446	0.6929	-0.356	-0.178	42.4	62.6	47.3	54.6	56.8	68.6
E058	chr6	43075087	43075089	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.193	0.1642	NA	NA	NA	7.9	0.0	1.0	8.9	8.8	9.7
E059	chr6	43075089	43075093	FALSE	LOW_COUNTS_INDEP_FILTER	5.9	0.193	0.1839	NA	NA	NA	7.9	0.0	1.0	7.9	9.8	8.7
E060	chr6	43075093	43075095	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.255	0.4732	NA	NA	NA	7.9	0.0	1.0	3.0	7.8	7.7
J061	chr6	43041124	43043057	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.147	0.5975	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	1.9
J062	chr6	43043508	43059025	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr6	43059271	43059404	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.196	0.4004	NA	NA	NA	2.0	1.0	0.0	0.0	2.0	0.0
J064	chr6	43059685	43061310	TRUE	OK	31.5	0.0273	0.1134	0.7114	0.541	0.270	19.7	11.5	28.2	47.7	38.2	43.5
J065	chr6	43059685	43062916	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J066	chr6	43060159	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.301	0.2922	NA	NA	NA	1.0	0.0	3.0	0.0	2.0	0.0
J067	chr6	43060182	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0609	0.9639	NA	NA	NA	2.0	0.0	2.0	2.0	1.0	2.9
J068	chr6	43060186	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.185	0.08261	NA	NA	NA	0.0	0.0	0.0	2.0	2.9	0.0
J069	chr6	43060238	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.165	0.0223	NA	NA	NA	0.0	2.1	2.0	0.0	0.0	0.0
J070	chr6	43060276	43060517	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.121	0.5751	NA	NA	NA	0.0	0.0	1.0	1.0	1.0	1.0
J071	chr6	43060605	43061310	TRUE	OK	9.9	0.0199	0.7502	0.9353	-0.150	-0.075	11.8	8.3	5.0	13.9	9.8	10.6
J072	chr6	43061593	43062885	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.267	0.3881	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J073	chr6	43061593	43062916	TRUE	OK	83.8	0.00779	0.04678	0.6161	0.400	0.200	52.3	62.6	55.4	117.1	120.5	94.7
J074	chr6	43061593	43062982	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.14	0.7999	NA	NA	NA	2.0	1.0	0.0	0.0	2.0	3.9
J075	chr6	43061593	43065619	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J076	chr6	43063147	43065619	TRUE	OK	112.5	0.00273	0.1897	0.7538	0.192	0.096	76.9	83.4	89.6	137.0	156.7	131.5
J077	chr6	43065701	43066305	TRUE	OK	89.9	0.00196	0.2362	0.7712	0.180	0.090	63.1	73.0	64.5	100.3	122.4	116.0
J078	chr6	43066525	43066995	TRUE	OK	71.8	0.0192	0.6199	0.8945	0.146	0.073	65.1	38.6	58.4	62.5	103.8	102.5
J079	chr6	43067083	43070353	TRUE	OK	67.7	0.00255	0.4412	0.8366	0.134	0.067	53.2	54.2	46.3	76.4	93.0	83.1
J080	chr6	43070455	43070691	TRUE	OK	86.3	0.00224	0.2456	0.7741	0.185	0.092	67.0	61.5	63.5	89.4	120.5	116.0
J081	chr6	43070865	43071274	TRUE	OK	71.0	0.00839	0.4227	0.8307	0.170	0.085	45.4	53.2	60.4	83.4	77.4	106.4
J082	chr6	43071374	43071566	TRUE	OK	80.6	0.00211	0.5577	0.874	0.094	0.047	61.1	66.7	58.4	88.4	105.8	103.5
J083	chr6	43071374	43071851	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.265	0.7759	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	0.0
J084	chr6	43071619	43071851	TRUE	OK	89.5	0.00253	0.3618	0.8113	0.147	0.073	69.0	70.9	62.4	89.4	120.5	124.7
J085	chr6	43071619	43072146	FALSE	LOW_COUNTS_INDEP_FILTER	4.7	0.0889	0.5704	NA	NA	NA	3.9	7.3	2.0	7.9	4.9	1.9
J086	chr6	43071922	43072146	TRUE	OK	91.3	0.00306	0.2272	0.7678	0.195	0.098	60.1	73.0	69.5	99.3	112.6	133.4
J087	chr6	43072255	43072740	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0169	0.2629	NA	NA	NA	6.9	7.3	5.0	3.0	7.8	8.7
J088	chr6	43072255	43072823	TRUE	OK	74.7	0.00555	0.5716	0.8787	0.112	0.056	55.2	66.7	49.4	73.5	93.0	110.2
J089	chr6	43072964	43073222	TRUE	OK	99.5	0.00274	0.9675	0.9923	-0.008	-0.004	67.0	93.8	78.6	109.2	121.4	126.7
J090	chr6	43073338	43073901	TRUE	OK	88.3	0.00314	0.2246	0.7667	-0.191	-0.095	74.9	84.5	68.5	78.4	108.7	115.1
J091	chr6	43073965	43074621	TRUE	OK	91.2	0.00338	0.9666	0.9922	0.013	0.006	72.0	81.3	64.5	84.4	122.4	122.8
N092	chr6	43040746	43040914	TRUE	OK	67.2	0.059	0.7229	0.927	-0.229	-0.115	72.0	29.2	74.5	87.4	71.5	68.6
N093	chr6	43041075	43042801	TRUE	OK	63.2	0.0185	0.8639	0.9669	0.036	0.018	60.1	38.6	50.4	83.4	65.6	81.2
N094	chr6	43042984	43043073	TRUE	OK	75.7	0.0198	0.1419	0.731	-0.414	-0.207	86.8	55.3	69.5	83.4	68.5	90.9
N095	chr6	43043180	43043447	TRUE	OK	62.2	0.00275	0.008873	0.3756	-0.463	-0.232	54.2	60.5	62.4	64.5	65.6	65.7
N096	chr6	43043630	43044751	TRUE	OK	63.0	0.00263	0.4594	0.8427	-0.128	-0.064	57.2	52.1	49.4	63.5	80.3	75.4
N097	chr6	43044885	43045226	TRUE	OK	64.2	0.00247	0.501	0.8559	-0.115	-0.057	51.3	56.3	53.4	62.5	79.3	82.2
N098	chr6	43045402	43045586	TRUE	OK	73.0	0.0104	0.6458	0.903	-0.094	-0.047	48.3	75.1	58.4	60.6	96.0	99.6
N099	chr6	43045682	43045985	TRUE	OK	81.3	0.00285	0.8962	0.9752	-0.018	-0.009	58.2	71.9	66.5	78.4	100.9	112.2
N100	chr6	43046091	43046235	TRUE	OK	79.2	0.00928	0.1376	0.7282	-0.319	-0.159	78.9	55.3	79.6	80.4	83.2	97.7
N101	chr6	43046407	43046510	TRUE	OK	81.0	0.0137	0.2033	0.7589	-0.314	-0.157	69.0	61.5	87.6	98.3	80.3	88.9
N102	chr6	43046601	43046879	TRUE	OK	63.5	0.0381	0.6542	0.9058	-0.185	-0.092	53.2	37.5	72.5	84.4	54.8	78.3
N103	chr6	43047107	43047946	TRUE	OK	11.7	0.0426	0.5427	0.8696	0.333	0.166	3.9	9.4	11.1	6.9	18.6	20.3
N104	chr6	43047107	43048147	TRUE	OK	46.5	0.0447	0.05897	0.6459	-0.748	-0.374	57.2	33.4	55.4	48.6	28.4	56.1
N105	chr6	43047989	43048147	TRUE	OK	11.2	0.0843	0.7477	0.9346	0.242	0.121	9.9	3.1	11.1	8.9	9.8	24.2
N106	chr6	43048253	43048331	TRUE	OK	61.7	0.0484	0.3011	0.7917	-0.423	-0.211	71.0	38.6	63.5	76.4	44.1	76.4
N107	chr6	43048569	43049406	TRUE	OK	62.1	0.00293	0.8342	0.959	0.038	0.019	50.3	45.9	50.4	69.5	73.4	83.1
N108	chr6	43049662	43049962	TRUE	OK	88.1	0.0109	0.1187	0.7149	-0.331	-0.165	80.9	87.6	70.5	82.4	84.2	122.8
N109	chr6	43050159	43050259	TRUE	OK	121.8	0.0148	0.2868	0.7874	-0.260	-0.130	105.5	88.6	126.9	149.9	130.2	129.6
N110	chr6	43050398	43050967	TRUE	OK	137.5	0.00218	0.0329	0.565	-0.282	-0.141	122.3	110.5	131.9	140.0	157.7	162.4
N111	chr6	43051468	43051611	TRUE	OK	45.0	0.0109	0.2411	0.7727	-0.302	-0.151	43.4	30.2	47.3	52.6	46.0	50.3
N112	chr6	43051763	43052112	TRUE	OK	11.7	0.0122	0.1277	0.7221	-0.599	-0.299	12.8	7.3	15.1	11.9	9.8	13.5
N113	chr6	43051763	43052208	TRUE	OK	57.8	0.0109	0.8973	0.9754	0.021	0.011	50.3	32.3	54.4	67.5	67.6	74.4
N114	chr6	43052796	43053621	TRUE	OK	49.2	0.00345	0.0801	0.6774	-0.346	-0.173	39.4	45.9	49.4	46.7	51.9	61.9
N115	chr6	43054486	43055544	TRUE	OK	617.1	0.0778	0.002675	0.2213	-1.439	-0.718	589.6	866.5	529.8	610.6	522.0	584.0
N116	chr6	43054486	43055896	TRUE	OK	77.4	0.00515	0.0004063	0.07847	-0.647	-0.324	68.0	88.6	77.6	72.5	68.5	88.9
N117	chr6	43054486	43058064	TRUE	OK	55.3	0.00569	2.517e-07	0.0002619	-1.063	-0.532	49.3	77.2	64.5	43.7	47.0	50.3
N118	chr6	43055618	43055896	TRUE	OK	591.1	0.0644	0.0008737	0.1226	-1.454	-0.726	580.8	833.1	509.7	545.0	508.2	569.5
N119	chr6	43056007	43056080	TRUE	OK	548.5	0.0235	1.476e-05	0.007509	-1.162	-0.580	537.4	678.8	496.6	514.3	496.5	567.5
N120	chr6	43056196	43056306	TRUE	OK	642.2	0.0188	7.127e-07	0.0006357	-1.193	-0.595	594.6	762.2	607.4	606.6	624.8	657.4
N121	chr6	43056445	43058064	TRUE	OK	523.8	0.0313	2.758e-05	0.01199	-1.290	-0.644	533.4	664.2	491.5	519.2	420.1	514.4
N122	chr6	43058233	43059285	TRUE	OK	506.7	0.0149	1.424e-06	0.001123	-1.044	-0.521	522.6	575.6	463.3	496.4	463.2	519.2
N123	chr6	43058233	43059782	TRUE	OK	11.7	0.0902	0.1147	0.7119	0.921	0.461	4.9	12.5	1.0	11.9	20.6	19.3

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000137171.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE