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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr13 | 40931923 | 40932027 | TRUE | OK | 33.9 | 0.0165 | 0.3416 | 0.8045 | 0.296 | 0.148 | 24.7 | 33.4 | 25.2 | 34.7 | 35.3 | 50.3 |
E002 | chr13 | 40932027 | 40933351 | TRUE | OK | 2385.0 | 0.017 | 0.1782 | 0.7483 | -0.278 | -0.139 | 2373.3 | 2505.7 | 2139.3 | 2390.6 | 2393.4 | 2508.0 |
E003 | chr13 | 40933351 | 40933438 | TRUE | OK | 662.5 | 0.00215 | 0.2429 | 0.7731 | -0.102 | -0.051 | 673.4 | 598.5 | 613.4 | 692.0 | 672.8 | 725.1 |
E004 | chr13 | 40933438 | 40934028 | TRUE | OK | 1745.2 | 0.00117 | 0.8724 | 0.969 | 0.007 | 0.004 | 1822.1 | 1367.0 | 1598.5 | 1934.0 | 1836.1 | 1913.4 |
E005 | chr13 | 40940920 | 40941370 | TRUE | OK | 1473.5 | 0.0142 | 0.3714 | 0.8139 | 0.145 | 0.072 | 1573.7 | 891.5 | 1411.1 | 1685.8 | 1630.5 | 1648.5 |
E006 | chr13 | 40942951 | 40943144 | TRUE | OK | 939.7 | 0.00392 | 0.1577 | 0.738 | 0.145 | 0.073 | 929.8 | 625.6 | 905.5 | 1082.1 | 1011.6 | 1083.8 |
E007 | chr13 | 40943841 | 40943925 | TRUE | OK | 721.2 | 0.00303 | 0.1362 | 0.7274 | 0.143 | 0.072 | 689.2 | 490.1 | 707.1 | 823.0 | 788.3 | 829.5 |
E008 | chr13 | 40949805 | 40949901 | TRUE | OK | 623.2 | 0.00592 | 0.3533 | 0.8084 | 0.109 | 0.054 | 620.2 | 400.4 | 628.5 | 714.8 | 660.0 | 715.5 |
E009 | chr13 | 40949901 | 40949973 | TRUE | OK | 576.6 | 0.0111 | 0.6456 | 0.903 | 0.049 | 0.025 | 601.5 | 346.2 | 610.4 | 631.4 | 607.2 | 663.2 |
E010 | chr13 | 40951328 | 40951436 | TRUE | OK | 681.6 | 0.0137 | 0.8521 | 0.9638 | -0.004 | -0.002 | 736.5 | 404.6 | 735.3 | 734.7 | 700.2 | 778.3 |
E011 | chr13 | 40951583 | 40951701 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0792 | 0.02555 | NA | NA | NA | 3.0 | 2.1 | 4.0 | 0.0 | 0.0 | 1.9 |
E012 | chr13 | 40958835 | 40959016 | TRUE | OK | 863.2 | 0.00851 | 0.5079 | 0.8585 | 0.077 | 0.039 | 914.0 | 540.1 | 858.2 | 927.3 | 946.0 | 993.9 |
E013 | chr13 | 40981982 | 40982225 | TRUE | OK | 932.7 | 0.00807 | 0.4121 | 0.8277 | 0.101 | 0.051 | 952.5 | 585.0 | 941.8 | 1073.2 | 998.9 | 1045.2 |
E014 | chr13 | 40982225 | 40982242 | TRUE | OK | 416.6 | 0.00945 | 0.3835 | 0.8184 | 0.128 | 0.064 | 426.9 | 252.3 | 414.0 | 523.2 | 427.0 | 456.3 |
E015 | chr13 | 40982242 | 40982282 | TRUE | OK | 416.7 | 0.00961 | 0.3974 | 0.823 | 0.128 | 0.064 | 423.0 | 255.5 | 415.0 | 531.1 | 420.1 | 455.4 |
E016 | chr13 | 40982857 | 40982899 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.131 | 0.01527 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 2.9 | 1.0 |
E017 | chr13 | 41019227 | 41019316 | TRUE | OK | 174.8 | 0.00439 | 0.2011 | 0.7585 | -0.196 | -0.098 | 205.1 | 124.1 | 185.3 | 190.6 | 171.4 | 172.1 |
E018 | chr13 | 41060837 | 41061440 | TRUE | OK | 514.0 | 0.00195 | 2.665e-07 | 0.0002741 | 0.466 | 0.233 | 454.5 | 312.8 | 419.0 | 660.2 | 603.2 | 634.2 |
J019 | chr13 | 40934028 | 40940920 | TRUE | OK | 442.5 | 0.00797 | 0.2042 | 0.7595 | 0.174 | 0.087 | 478.2 | 263.8 | 399.9 | 492.4 | 509.2 | 511.5 |
J020 | chr13 | 40941370 | 40942951 | TRUE | OK | 453.7 | 0.0103 | 0.3792 | 0.8166 | 0.125 | 0.062 | 478.2 | 264.9 | 449.2 | 519.2 | 474.0 | 536.6 |
J021 | chr13 | 40943144 | 40943841 | TRUE | OK | 506.1 | 0.000941 | 0.03959 | 0.5919 | 0.152 | 0.076 | 462.4 | 373.3 | 481.5 | 585.7 | 558.2 | 575.3 |
J022 | chr13 | 40943925 | 40949805 | TRUE | OK | 407.1 | 0.00243 | 0.08569 | 0.6844 | 0.166 | 0.083 | 397.4 | 266.9 | 388.8 | 459.7 | 448.5 | 481.5 |
J023 | chr13 | 40949901 | 40951328 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.106 | 0.3145 | NA | NA | NA | 3.0 | 1.0 | 4.0 | 1.0 | 0.0 | 3.9 |
J024 | chr13 | 40949973 | 40951328 | TRUE | OK | 441.9 | 0.014 | 0.9683 | 0.9926 | -0.033 | -0.016 | 461.5 | 263.8 | 503.6 | 467.6 | 453.4 | 501.8 |
J025 | chr13 | 40951436 | 40951583 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.4862 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J026 | chr13 | 40951436 | 40958835 | TRUE | OK | 389.9 | 0.0135 | 0.6239 | 0.8958 | 0.055 | 0.028 | 438.8 | 221.1 | 390.8 | 437.8 | 409.3 | 441.8 |
J027 | chr13 | 40951701 | 40958835 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.275 | 0.5459 | NA | NA | NA | 0.0 | 2.1 | 1.0 | 0.0 | 0.0 | 1.9 |
J028 | chr13 | 40959016 | 40981982 | TRUE | OK | 515.0 | 0.00487 | 0.4257 | 0.8315 | 0.088 | 0.044 | 525.5 | 339.9 | 506.6 | 544.0 | 555.3 | 618.8 |
J029 | chr13 | 40982282 | 40982857 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.0878 | 0.01222 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 2.9 | 1.0 |
J030 | chr13 | 40982282 | 41019227 | TRUE | OK | 165.6 | 0.00422 | 0.223 | 0.7661 | -0.188 | -0.094 | 194.2 | 115.7 | 176.3 | 181.7 | 163.5 | 162.4 |
J031 | chr13 | 40982282 | 41060837 | TRUE | OK | 152.4 | 0.00728 | 0.001328 | 0.1543 | 0.559 | 0.279 | 125.2 | 87.6 | 121.9 | 231.3 | 162.6 | 185.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000120690.16 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |