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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr19 | 36445118 | 36446115 | TRUE | OK | 40.9 | 0.0118 | 0.5736 | 0.8793 | -0.153 | -0.077 | 51.3 | 48.0 | 43.3 | 41.7 | 35.3 | 26.1 |
E002 | chr19 | 36446115 | 36447020 | TRUE | OK | 41.5 | 0.0203 | 0.3692 | 0.8133 | -0.280 | -0.140 | 47.3 | 61.5 | 40.3 | 29.8 | 41.1 | 29.0 |
E003 | chr19 | 36447020 | 36447628 | TRUE | OK | 33.2 | 0.00776 | 0.9233 | 0.982 | -0.027 | -0.013 | 42.4 | 39.6 | 30.2 | 25.8 | 34.3 | 27.1 |
E004 | chr19 | 36447628 | 36447681 | TRUE | OK | 14.3 | 0.0133 | 0.7788 | 0.9441 | 0.100 | 0.050 | 18.7 | 16.7 | 11.1 | 14.9 | 13.7 | 10.6 |
E005 | chr19 | 36447681 | 36449398 | TRUE | OK | 80.0 | 0.00547 | 0.09386 | 0.6922 | -0.337 | -0.168 | 99.6 | 87.6 | 99.7 | 62.5 | 56.8 | 73.5 |
E006 | chr19 | 36449398 | 36449532 | TRUE | OK | 21.4 | 0.0184 | 0.5822 | 0.8819 | 0.200 | 0.100 | 21.7 | 17.7 | 28.2 | 12.9 | 23.5 | 24.2 |
E007 | chr19 | 36449532 | 36449555 | TRUE | OK | 11.6 | 0.0364 | 0.5698 | 0.8781 | 0.307 | 0.154 | 12.8 | 11.5 | 11.1 | 4.0 | 14.7 | 15.5 |
E008 | chr19 | 36449555 | 36449763 | TRUE | OK | 23.2 | 0.0124 | 0.8684 | 0.968 | 0.053 | 0.026 | 32.5 | 19.8 | 24.2 | 13.9 | 21.5 | 27.1 |
E009 | chr19 | 36449763 | 36450001 | TRUE | OK | 27.9 | 0.0172 | 0.4689 | 0.8457 | -0.249 | -0.125 | 42.4 | 21.9 | 35.3 | 24.8 | 17.6 | 25.1 |
E010 | chr19 | 36456459 | 36456549 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.22 | 0.2937 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 1.0 |
E011 | chr19 | 36472910 | 36472990 | TRUE | OK | 19.4 | 0.0117 | 0.5837 | 0.8826 | -0.190 | -0.095 | 26.6 | 15.6 | 26.2 | 17.9 | 15.7 | 14.5 |
E012 | chr19 | 36472990 | 36473006 | TRUE | OK | 14.1 | 0.0148 | 0.8464 | 0.9622 | -0.083 | -0.041 | 19.7 | 10.4 | 18.1 | 13.9 | 12.7 | 9.7 |
E013 | chr19 | 36473006 | 36473009 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0609 | 0.4842 | NA | NA | NA | 3.0 | 6.3 | 2.0 | 1.0 | 2.9 | 1.9 |
E014 | chr19 | 36473009 | 36473140 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.222 | 0.4781 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 1.0 | 0.0 | 0.0 |
E015 | chr19 | 36473140 | 36473331 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.141 | 0.837 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 |
E016 | chr19 | 36473331 | 36473458 | TRUE | OK | 21.2 | 0.0565 | 0.9232 | 0.982 | -0.015 | -0.008 | 27.6 | 10.4 | 33.2 | 21.8 | 19.6 | 14.5 |
E017 | chr19 | 36476108 | 36476548 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.78 | 0.4698 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 0.0 | 0.0 | 0.0 |
E018 | chr19 | 36476548 | 36476616 | TRUE | OK | 11.7 | 0.0764 | 0.7415 | 0.9331 | 0.102 | 0.051 | 12.8 | 4.2 | 21.2 | 11.9 | 8.8 | 11.6 |
E019 | chr19 | 36489412 | 36489435 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.257 | 0.7101 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 |
E020 | chr19 | 36489473 | 36489485 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.19 | 0.8028 | NA | NA | NA | 0.0 | 1.0 | 3.0 | 2.0 | 0.0 | 1.9 |
E021 | chr19 | 36489485 | 36489506 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.135 | 0.5915 | NA | NA | NA | 7.9 | 1.0 | 12.1 | 9.9 | 3.9 | 6.8 |
E022 | chr19 | 36489506 | 36489518 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.138 | 0.6177 | NA | NA | NA | 6.9 | 1.0 | 11.1 | 8.9 | 2.9 | 6.8 |
E023 | chr19 | 36489518 | 36489519 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.9 | 0.0864 | 0.4731 | NA | NA | NA | 6.9 | 1.0 | 6.0 | 6.9 | 2.0 | 6.8 |
E024 | chr19 | 36489519 | 36489537 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0327 | 0.825 | NA | NA | NA | 7.9 | 4.2 | 6.0 | 6.9 | 2.0 | 6.8 |
E025 | chr19 | 36489537 | 36489561 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0583 | 0.9728 | NA | NA | NA | 5.9 | 4.2 | 2.0 | 3.0 | 1.0 | 5.8 |
E026 | chr19 | 36489561 | 36489861 | TRUE | OK | 26.4 | 0.00911 | 4.799e-05 | 0.01838 | 1.195 | 0.597 | 20.7 | 20.9 | 18.1 | 24.8 | 34.3 | 39.6 |
E027 | chr19 | 36489861 | 36489902 | TRUE | OK | 19.3 | 0.0102 | 0.0001989 | 0.04955 | 1.224 | 0.612 | 15.8 | 17.7 | 9.1 | 22.8 | 24.5 | 26.1 |
J028 | chr19 | 36446115 | 36449398 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.459 | 0.636 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 3.9 | 0.0 |
J029 | chr19 | 36450001 | 36472910 | TRUE | OK | 13.3 | 0.0108 | 0.3189 | 0.7972 | -0.384 | -0.192 | 19.7 | 11.5 | 18.1 | 12.9 | 7.8 | 9.7 |
J030 | chr19 | 36450001 | 36476548 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.557 | 0.4775 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J031 | chr19 | 36456549 | 36476548 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J032 | chr19 | 36473006 | 36473331 | TRUE | OK | 10.6 | 0.115 | 0.7952 | 0.9485 | 0.037 | 0.019 | 16.8 | 2.1 | 16.1 | 11.9 | 8.8 | 7.7 |
J033 | chr19 | 36473009 | 36473331 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0452 | 0.7231 | NA | NA | NA | 2.0 | 5.2 | 2.0 | 1.0 | 2.9 | 1.9 |
J034 | chr19 | 36473458 | 36476548 | TRUE | OK | 11.1 | 0.0981 | 0.8364 | 0.9596 | -0.001 | -0.000 | 12.8 | 3.1 | 21.2 | 9.9 | 8.8 | 10.6 |
J035 | chr19 | 36476616 | 36489412 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J036 | chr19 | 36476616 | 36489473 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.248 | 0.5555 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 2.0 | 0.0 | 1.0 |
J037 | chr19 | 36476616 | 36489485 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.211 | 0.7631 | NA | NA | NA | 7.9 | 0.0 | 9.1 | 7.9 | 2.9 | 3.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000186017.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |