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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr14 | 103123441 | 103123460 | TRUE | OK | 9.8 | 0.0458 | 0.1701 | 0.7442 | 0.713 | 0.357 | 13.8 | 6.3 | 6.0 | 13.9 | 12.7 | 5.8 |
E002 | chr14 | 103123460 | 103123483 | TRUE | OK | 72.3 | 0.00458 | 0.9659 | 0.992 | 0.010 | 0.005 | 86.8 | 74.0 | 85.6 | 73.5 | 48.0 | 65.7 |
E003 | chr14 | 103123483 | 103123951 | TRUE | OK | 135.9 | 0.00778 | 0.1442 | 0.7323 | 0.257 | 0.128 | 161.7 | 113.7 | 155.1 | 133.0 | 108.7 | 143.1 |
E004 | chr14 | 103124374 | 103124506 | TRUE | OK | 20.4 | 0.0218 | 0.383 | 0.818 | -0.330 | -0.165 | 29.6 | 15.6 | 31.2 | 17.9 | 18.6 | 9.7 |
E005 | chr14 | 103126305 | 103126309 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.1 | 0.0205 | 0.8237 | NA | NA | NA | 11.8 | 7.3 | 11.1 | 7.9 | 11.8 | 4.8 |
E006 | chr14 | 103126309 | 103126388 | TRUE | OK | 159.9 | 0.00659 | 0.1708 | 0.7444 | 0.222 | 0.111 | 182.4 | 132.4 | 197.4 | 176.7 | 140.0 | 130.5 |
E007 | chr14 | 103126388 | 103126564 | TRUE | OK | 259.4 | 0.00237 | 0.2728 | 0.783 | 0.119 | 0.060 | 288.9 | 244.0 | 325.3 | 258.1 | 224.3 | 215.6 |
E008 | chr14 | 103126564 | 103126575 | TRUE | OK | 162.4 | 0.00355 | 0.7983 | 0.9493 | -0.042 | -0.021 | 199.2 | 150.2 | 212.5 | 148.9 | 133.2 | 130.5 |
E009 | chr14 | 103126575 | 103126692 | TRUE | OK | 214.1 | 0.00982 | 0.5244 | 0.8636 | -0.123 | -0.062 | 279.0 | 196.0 | 282.0 | 203.5 | 182.1 | 142.1 |
E010 | chr14 | 103127004 | 103127402 | TRUE | OK | 340.6 | 0.0343 | 0.0347 | 0.5726 | -0.617 | -0.308 | 476.2 | 375.4 | 496.6 | 297.8 | 264.4 | 133.4 |
E011 | chr14 | 103127402 | 103127565 | TRUE | OK | 200.8 | 0.00448 | 0.7857 | 0.9459 | -0.037 | -0.019 | 237.6 | 204.4 | 251.8 | 189.6 | 182.1 | 139.2 |
E012 | chr14 | 103127565 | 103127575 | TRUE | OK | 141.0 | 0.00254 | 0.1171 | 0.7135 | 0.206 | 0.103 | 148.9 | 147.0 | 158.1 | 133.0 | 138.1 | 120.9 |
E013 | chr14 | 103127575 | 103127629 | TRUE | OK | 163.0 | 0.00206 | 0.008783 | 0.3741 | 0.316 | 0.158 | 163.7 | 158.5 | 185.3 | 162.8 | 159.6 | 147.9 |
E014 | chr14 | 103129739 | 103129854 | TRUE | OK | 185.1 | 0.00179 | 0.0002483 | 0.05752 | 0.416 | 0.208 | 188.3 | 170.0 | 200.4 | 198.6 | 171.4 | 181.8 |
E015 | chr14 | 103129854 | 103130001 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.0201 | 0.3069 | NA | NA | NA | 12.8 | 7.3 | 11.1 | 7.9 | 4.9 | 3.9 |
E016 | chr14 | 103130001 | 103130033 | TRUE | OK | 163.5 | 0.00271 | 0.007386 | 0.3488 | 0.342 | 0.171 | 172.6 | 142.9 | 189.4 | 178.7 | 141.0 | 156.6 |
E017 | chr14 | 103130033 | 103130124 | TRUE | OK | 179.7 | 0.00578 | 0.09863 | 0.6967 | 0.257 | 0.129 | 204.1 | 162.7 | 203.5 | 178.7 | 141.0 | 188.5 |
E018 | chr14 | 103130314 | 103130415 | TRUE | OK | 198.8 | 0.00647 | 0.2506 | 0.7755 | 0.181 | 0.091 | 240.6 | 186.6 | 218.6 | 181.7 | 161.6 | 204.0 |
E019 | chr14 | 103131051 | 103131095 | TRUE | OK | 171.7 | 0.0039 | 0.09968 | 0.6978 | 0.229 | 0.114 | 198.2 | 170.0 | 181.3 | 160.8 | 145.9 | 174.0 |
E020 | chr14 | 103131095 | 103131150 | TRUE | OK | 195.8 | 0.00367 | 0.09479 | 0.6936 | 0.222 | 0.111 | 225.8 | 190.8 | 211.5 | 182.7 | 166.5 | 197.2 |
E021 | chr14 | 103131638 | 103131762 | TRUE | OK | 228.1 | 0.00671 | 0.3608 | 0.811 | 0.142 | 0.071 | 282.0 | 217.9 | 249.8 | 201.5 | 189.0 | 228.2 |
E022 | chr14 | 103132701 | 103132747 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.0184 | 0.607 | NA | NA | NA | 11.8 | 9.4 | 8.1 | 6.9 | 5.9 | 5.8 |
E023 | chr14 | 103132747 | 103132749 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.021 | 0.5098 | NA | NA | NA | 9.9 | 9.4 | 7.1 | 6.0 | 5.9 | 3.9 |
E024 | chr14 | 103132749 | 103132872 | TRUE | OK | 236.5 | 0.0044 | 0.1291 | 0.7228 | 0.199 | 0.099 | 282.0 | 205.4 | 277.0 | 226.4 | 207.6 | 220.4 |
E025 | chr14 | 103133361 | 103133517 | TRUE | OK | 278.2 | 0.00576 | 0.119 | 0.7151 | 0.218 | 0.109 | 333.3 | 237.7 | 324.3 | 260.1 | 250.7 | 263.0 |
E026 | chr14 | 103133681 | 103133765 | TRUE | OK | 203.9 | 0.00798 | 0.2599 | 0.7792 | 0.186 | 0.093 | 256.4 | 175.2 | 229.6 | 203.5 | 161.6 | 197.2 |
E027 | chr14 | 103133765 | 103133803 | TRUE | OK | 153.2 | 0.00792 | 0.1839 | 0.7504 | 0.234 | 0.117 | 194.2 | 138.7 | 156.1 | 163.8 | 122.4 | 144.1 |
E028 | chr14 | 103135218 | 103135351 | TRUE | OK | 245.1 | 0.00604 | 0.2264 | 0.7676 | 0.177 | 0.089 | 305.7 | 217.9 | 274.0 | 242.2 | 200.8 | 230.1 |
E029 | chr14 | 103135351 | 103135650 | TRUE | OK | 291.9 | 0.00761 | 0.1489 | 0.7343 | 0.222 | 0.111 | 341.2 | 243.0 | 354.5 | 280.0 | 243.8 | 289.1 |
E030 | chr14 | 103135650 | 103135651 | TRUE | OK | 137.9 | 0.00346 | 0.003979 | 0.2657 | 0.404 | 0.202 | 153.8 | 111.6 | 151.1 | 149.9 | 126.3 | 134.4 |
E031 | chr14 | 103135651 | 103135808 | TRUE | OK | 250.0 | 0.00206 | 0.006883 | 0.3375 | 0.291 | 0.146 | 261.3 | 229.4 | 296.1 | 260.1 | 216.4 | 236.9 |
E032 | chr14 | 103135808 | 103136402 | TRUE | OK | 713.7 | 0.000913 | 0.2259 | 0.7673 | 0.086 | 0.043 | 785.8 | 746.6 | 862.2 | 671.1 | 603.2 | 613.0 |
E033 | chr14 | 103136402 | 103136454 | TRUE | OK | 186.2 | 0.00228 | 0.3089 | 0.794 | 0.121 | 0.060 | 215.9 | 191.9 | 207.5 | 170.8 | 170.4 | 160.5 |
E034 | chr14 | 103136454 | 103136682 | TRUE | OK | 268.0 | 0.00246 | 0.08065 | 0.6779 | -0.196 | -0.098 | 311.6 | 328.5 | 325.3 | 222.4 | 205.6 | 214.6 |
E035 | chr14 | 103136682 | 103136881 | TRUE | OK | 294.8 | 0.0081 | 0.2092 | 0.761 | -0.211 | -0.105 | 312.6 | 398.3 | 354.5 | 250.2 | 215.4 | 237.8 |
E036 | chr14 | 103136881 | 103137432 | TRUE | OK | 450.6 | 0.0183 | 0.4421 | 0.837 | -0.187 | -0.093 | 451.6 | 654.8 | 507.6 | 404.1 | 322.2 | 363.5 |
E037 | chr14 | 103137432 | 103137439 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0809 | 0.1027 | NA | NA | NA | 2.0 | 3.1 | 7.1 | 2.0 | 0.0 | 1.0 |
J038 | chr14 | 103123483 | 103124374 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.767 | 0.918 | NA | NA | NA | 0.0 | 0.0 | 4.0 | 2.0 | 0.0 | 0.0 |
J039 | chr14 | 103123483 | 103126309 | TRUE | OK | 40.2 | 0.00451 | 0.7346 | 0.931 | 0.077 | 0.039 | 47.3 | 40.7 | 46.3 | 46.7 | 27.4 | 32.9 |
J040 | chr14 | 103123951 | 103126309 | TRUE | OK | 46.6 | 0.00462 | 0.006432 | 0.3282 | 0.557 | 0.278 | 48.3 | 30.2 | 54.4 | 50.6 | 47.0 | 49.3 |
J041 | chr14 | 103124506 | 103126309 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.2 | 0.0156 | 0.4267 | NA | NA | NA | 9.9 | 8.3 | 9.1 | 6.9 | 6.9 | 1.9 |
J042 | chr14 | 103126564 | 103127402 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0348 | 0.03141 | NA | NA | NA | 1.0 | 1.0 | 2.0 | 4.0 | 3.9 | 2.9 |
J043 | chr14 | 103126692 | 103127004 | TRUE | OK | 136.6 | 0.0153 | 0.1561 | 0.7372 | -0.325 | -0.162 | 173.5 | 134.5 | 201.4 | 120.1 | 117.5 | 72.5 |
J044 | chr14 | 103126692 | 103129739 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.265 | 0.8581 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
J045 | chr14 | 103126692 | 103130001 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J046 | chr14 | 103127629 | 103129739 | TRUE | OK | 106.1 | 0.00191 | 2.72e-05 | 0.01187 | 0.573 | 0.287 | 92.7 | 93.8 | 115.8 | 116.2 | 106.7 | 111.2 |
J047 | chr14 | 103127629 | 103130001 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J048 | chr14 | 103129854 | 103130001 | TRUE | OK | 118.7 | 0.00202 | 0.001289 | 0.152 | 0.429 | 0.215 | 120.3 | 107.4 | 127.9 | 137.0 | 101.8 | 118.0 |
J049 | chr14 | 103130124 | 103130314 | TRUE | OK | 127.6 | 0.00633 | 0.166 | 0.7424 | 0.232 | 0.116 | 151.8 | 111.6 | 144.0 | 119.1 | 103.8 | 135.4 |
J050 | chr14 | 103130415 | 103131051 | TRUE | OK | 135.2 | 0.00838 | 0.343 | 0.8048 | 0.176 | 0.088 | 163.7 | 131.4 | 144.0 | 118.1 | 107.7 | 146.0 |
J051 | chr14 | 103131150 | 103131638 | TRUE | OK | 137.8 | 0.00501 | 0.19 | 0.7539 | 0.203 | 0.101 | 166.6 | 134.5 | 143.0 | 122.1 | 121.4 | 139.2 |
J052 | chr14 | 103131762 | 103132701 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.308 | 0.5291 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
J053 | chr14 | 103131762 | 103132749 | TRUE | OK | 133.5 | 0.00491 | 0.4532 | 0.8404 | 0.114 | 0.057 | 165.6 | 121.0 | 155.1 | 129.1 | 101.8 | 128.6 |
J054 | chr14 | 103132872 | 103133361 | TRUE | OK | 156.6 | 0.00613 | 0.04227 | 0.6014 | 0.318 | 0.159 | 178.5 | 125.1 | 183.3 | 144.9 | 155.7 | 151.8 |
J055 | chr14 | 103132872 | 103133681 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J056 | chr14 | 103133517 | 103133681 | TRUE | OK | 147.8 | 0.00757 | 0.2793 | 0.7847 | 0.180 | 0.090 | 184.4 | 123.0 | 172.2 | 139.0 | 121.4 | 147.0 |
J057 | chr14 | 103133803 | 103135218 | TRUE | OK | 128.3 | 0.014 | 0.331 | 0.8012 | 0.212 | 0.106 | 173.5 | 110.5 | 127.9 | 142.0 | 96.9 | 118.9 |
J058 | chr14 | 103135351 | 103135808 | TRUE | OK | 39.5 | 0.00406 | 0.3112 | 0.7948 | 0.220 | 0.110 | 44.4 | 44.8 | 37.3 | 38.7 | 37.2 | 34.8 |
J059 | chr14 | 103136454 | 103136881 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.12 | 0.4672 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000185215.9 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |