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Normalized Counts Table (ENSG00000103494.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr16	53598152	53599911	TRUE	OK	38.0	0.00869	0.06064	0.6489	-0.464	-0.232	46.3	50.1	40.3	32.8	28.4	30.0
E002	chr16	53599911	53601780	TRUE	OK	162.4	0.00609	0.9788	0.9949	0.004	0.002	165.6	161.6	182.3	148.9	140.0	176.0
E003	chr16	53601780	53602188	TRUE	OK	130.0	0.00493	0.06104	0.6496	-0.294	-0.147	149.9	134.5	159.1	110.2	95.0	131.5
E004	chr16	53605394	53605480	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.0495	0.7387	NA	NA	NA	3.9	2.1	3.0	3.0	1.0	2.9
E005	chr16	53605480	53605614	TRUE	OK	77.7	0.00372	0.0001093	0.03305	-0.678	-0.339	110.4	78.2	104.8	62.5	59.7	50.3
E006	chr16	53610966	53611051	TRUE	OK	66.6	0.00431	0.01615	0.4596	-0.451	-0.226	89.7	66.7	81.6	48.6	58.8	54.1
E007	chr16	53619024	53619208	TRUE	OK	62.8	0.00378	0.6442	0.9025	-0.090	-0.045	79.9	54.2	68.5	63.5	54.8	56.1
E008	chr16	53622218	53622356	TRUE	OK	17.4	0.0151	0.6136	0.8924	0.175	0.087	23.7	15.6	12.1	19.9	12.7	20.3
E009	chr16	53635440	53635623	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.101	0.7908	NA	NA	NA	1.0	3.1	2.0	3.0	0.0	3.9
E010	chr16	53636438	53636512	TRUE	OK	57.3	0.00471	0.2253	0.767	0.235	0.118	68.0	45.9	52.4	66.5	49.9	60.9
E011	chr16	53637694	53637854	TRUE	OK	92.8	0.00816	0.3126	0.7951	0.199	0.099	111.4	86.5	75.5	103.3	84.2	95.7
E012	chr16	53638309	53638374	TRUE	OK	38.8	0.00869	0.7301	0.9295	0.092	0.046	45.4	38.6	34.2	40.7	28.4	45.4
E013	chr16	53638374	53638411	TRUE	OK	35.8	0.00796	0.982	0.9957	0.010	0.005	44.4	36.5	31.2	39.7	26.4	36.7
E014	chr16	53641032	53641116	TRUE	OK	81.0	0.00515	0.2283	0.7684	0.218	0.109	94.7	65.7	76.5	100.3	69.5	79.3
E015	chr16	53641284	53641475	TRUE	OK	88.3	0.0048	0.5714	0.8787	0.093	0.047	102.5	65.7	100.7	104.2	75.4	81.2
E016	chr16	53645624	53646003	TRUE	OK	100.2	0.0173	0.6636	0.9087	0.063	0.031	127.2	57.3	123.9	107.2	85.2	100.6
E017	chr16	53648963	53649115	TRUE	OK	76.8	0.0159	0.6902	0.9168	-0.138	-0.069	105.5	48.0	97.7	82.4	61.7	65.7
E018	chr16	53652534	53652987	TRUE	OK	118.4	0.00467	0.3839	0.8184	0.133	0.067	133.1	86.5	137.0	138.0	102.8	113.1
E019	chr16	53653450	53653518	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.854	0.6247	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E020	chr16	53655527	53655599	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.251	0.5722	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	1.0
E021	chr16	53656471	53656589	TRUE	OK	66.4	0.00378	0.2642	0.7805	0.195	0.098	78.9	50.1	66.5	70.5	63.7	68.6
E022	chr16	53657452	53657632	TRUE	OK	71.3	0.00733	0.1886	0.7528	0.262	0.131	86.8	51.1	67.5	88.4	58.8	75.4
E023	chr16	53658413	53658464	TRUE	OK	46.8	0.0175	0.4562	0.8415	0.213	0.106	55.2	30.2	51.4	56.6	30.4	57.0
E024	chr16	53658771	53658878	TRUE	OK	55.4	0.031	0.6873	0.9159	0.161	0.081	63.1	36.5	65.5	69.5	30.4	67.7
E025	chr16	53658878	53659893	FALSE	LOW_COUNTS_INDEP_FILTER	7.3	0.0291	0.2359	NA	NA	NA	6.9	5.2	6.0	6.0	12.7	6.8
E026	chr16	53664869	53665009	TRUE	OK	55.5	0.00459	0.8652	0.9672	-0.040	-0.020	65.1	42.8	68.5	59.6	49.0	48.3
E027	chr16	53671509	53671550	TRUE	OK	47.7	0.00533	0.8314	0.9581	-0.052	-0.026	58.2	39.6	54.4	44.7	49.9	39.6
E028	chr16	53671550	53671583	TRUE	OK	50.3	0.0112	0.628	0.8971	-0.115	-0.058	57.2	49.0	57.4	45.7	56.8	35.8
E029	chr16	53672869	53673016	TRUE	OK	75.9	0.00363	0.9653	0.9919	-0.012	-0.006	82.8	65.7	90.7	68.5	72.5	75.4
E030	chr16	53675016	53675122	TRUE	OK	79.4	0.00682	0.1008	0.6987	0.304	0.152	74.9	53.2	97.7	84.4	81.3	85.1
E031	chr16	53686432	53686576	TRUE	OK	77.2	0.0167	0.1302	0.7235	0.345	0.173	80.9	39.6	95.7	89.4	73.4	84.1
E032	chr16	53687862	53687965	TRUE	OK	65.6	0.0216	0.391	0.8208	0.186	0.093	84.8	32.3	76.5	66.5	64.6	68.6
E033	chr16	53692065	53692226	TRUE	OK	92.5	0.0143	0.4426	0.8372	0.142	0.071	108.5	53.2	115.8	101.3	87.2	88.9
E034	chr16	53692226	53692364	TRUE	OK	91.8	0.024	0.195	0.7559	0.316	0.158	97.6	46.9	115.8	86.4	97.9	106.4
E035	chr16	53693311	53695458	TRUE	OK	85.0	0.0265	0.8842	0.9721	-0.047	-0.024	87.8	112.6	70.5	84.4	78.3	76.4
E036	chr16	53695630	53696150	TRUE	OK	42.4	0.0145	0.3859	0.8189	-0.228	-0.114	44.4	56.3	42.3	38.7	33.3	39.6
E037	chr16	53696150	53696212	TRUE	OK	147.1	0.00649	0.8878	0.973	-0.021	-0.010	170.6	146.0	148.1	126.1	140.0	151.8
E038	chr16	53696212	53696295	TRUE	OK	141.3	0.00828	0.2593	0.7789	-0.204	-0.102	166.6	152.2	151.1	115.2	137.1	125.7
E039	chr16	53700638	53700726	TRUE	OK	114.2	0.00538	0.3138	0.7956	-0.170	-0.085	141.0	114.7	120.9	93.3	108.7	106.4
E040	chr16	53700726	53700730	TRUE	OK	54.0	0.00529	0.0609	0.6494	-0.384	-0.192	73.0	59.4	57.4	42.7	42.1	49.3
E041	chr16	53703227	53703261	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.167	0.1931	NA	NA	NA	3.0	1.0	0.0	1.0	5.9	2.9
E042	chr16	53703554	53703802	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.11	0.05737	NA	NA	NA	3.9	1.0	2.0	0.0	1.0	0.0
E043	chr16	53703802	53703810	TRUE	OK	51.1	0.00535	0.1034	0.7012	-0.340	-0.170	69.0	54.2	54.4	41.7	38.2	49.3
E044	chr16	53703810	53703830	TRUE	OK	43.1	0.00467	0.2896	0.7885	-0.231	-0.115	55.2	41.7	48.3	37.7	34.3	41.6
E045	chr16	53703830	53703844	TRUE	OK	27.8	0.00611	0.02185	0.5056	-0.611	-0.305	38.5	28.2	37.3	21.8	20.6	20.3
E046	chr16	53703844	53703847	TRUE	OK	18.5	0.00902	0.1963	0.7564	-0.416	-0.208	20.7	18.8	26.2	15.9	12.7	16.4
E047	chr16	53703847	53703859	TRUE	OK	10.6	0.0143	0.6624	0.9083	0.181	0.090	11.8	9.4	10.1	9.9	8.8	13.5
E048	chr16	53703859	53703889	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0543	0.7013	NA	NA	NA	6.9	3.1	5.0	5.0	2.0	9.7
E049	chr16	53703889	53703938	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.11	0.1753	NA	NA	NA	2.0	1.0	0.0	2.0	1.0	4.8
J050	chr16	53602188	53605480	TRUE	OK	49.0	0.00366	2.706e-05	0.01182	-0.857	-0.428	62.1	57.3	74.5	34.7	34.3	30.9
J051	chr16	53605614	53610966	TRUE	OK	44.4	0.00447	0.005461	0.3066	-0.603	-0.301	66.1	43.8	55.4	30.8	39.2	30.9
J052	chr16	53611051	53619024	TRUE	OK	33.0	0.00459	0.4326	0.8337	-0.192	-0.096	40.4	28.2	41.3	24.8	31.3	31.9
J053	chr16	53619208	53622218	FALSE	LOW_COUNTS_INDEP_FILTER	9.0	0.012	0.4327	NA	NA	NA	12.8	10.4	8.1	6.9	6.9	8.7
J054	chr16	53619208	53636438	TRUE	OK	23.2	0.00622	0.639	0.9007	0.133	0.067	24.7	20.9	24.2	30.8	17.6	21.3
J055	chr16	53622356	53636438	TRUE	OK	9.9	0.0476	0.3432	0.8049	0.483	0.242	14.8	6.3	5.0	13.9	5.9	13.5
J056	chr16	53635623	53636438	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.59	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J057	chr16	53636512	53637694	TRUE	OK	42.2	0.00539	0.3183	0.797	0.222	0.111	49.3	40.7	33.2	46.7	37.2	46.4
J058	chr16	53637854	53638309	TRUE	OK	25.7	0.00757	0.7873	0.9463	0.072	0.036	33.5	21.9	23.2	23.8	19.6	31.9
J059	chr16	53637854	53641032	TRUE	OK	27.6	0.00795	0.3474	0.8066	0.252	0.126	35.5	21.9	22.2	35.7	22.5	28.0
J060	chr16	53638411	53641032	TRUE	OK	33.5	0.00945	0.8336	0.9589	0.063	0.031	40.4	34.4	28.2	39.7	23.5	34.8
J061	chr16	53641116	53641284	TRUE	OK	55.0	0.0031	0.1117	0.7093	0.295	0.148	58.2	41.7	56.4	68.5	50.9	54.1
J062	chr16	53641475	53645624	TRUE	OK	36.6	0.00487	0.9316	0.9839	-0.028	-0.014	42.4	25.0	48.3	38.7	29.4	35.8
J063	chr16	53646003	53648963	TRUE	OK	43.8	0.027	0.8903	0.9738	-0.116	-0.058	65.1	21.9	55.4	39.7	38.2	42.5
J064	chr16	53649115	53652534	TRUE	OK	39.3	0.0119	0.9064	0.9777	0.032	0.016	44.4	28.2	49.4	50.6	26.4	36.7
J065	chr16	53652987	53656471	TRUE	OK	45.4	0.00301	0.5591	0.8743	0.115	0.058	49.3	40.7	47.3	45.7	43.1	46.4
J066	chr16	53653518	53655527	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J067	chr16	53655599	53656471	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.257	0.2246	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J068	chr16	53656589	53657452	TRUE	OK	34.9	0.0121	0.3115	0.7948	0.250	0.125	47.3	19.8	33.2	37.7	38.2	32.9
J069	chr16	53657632	53658413	TRUE	OK	37.9	0.0124	0.184	0.7504	0.367	0.184	41.4	27.1	36.3	47.7	25.5	49.3
J070	chr16	53658464	53658771	TRUE	OK	36.2	0.0289	0.5295	0.8652	0.245	0.122	41.4	24.0	39.3	47.7	19.6	45.4
J071	chr16	53658878	53664869	TRUE	OK	31.8	0.0324	0.9842	0.9961	0.003	0.001	33.5	19.8	46.3	40.7	17.6	32.9
J072	chr16	53665009	53671509	TRUE	OK	32.6	0.00491	0.7249	0.9277	0.077	0.039	40.4	26.1	33.2	29.8	36.2	30.0
J073	chr16	53671583	53672869	TRUE	OK	41.5	0.00776	0.9098	0.9786	-0.027	-0.013	43.4	39.6	48.3	39.7	47.0	30.9
J074	chr16	53673016	53675016	TRUE	OK	52.0	0.00578	0.5173	0.8614	0.132	0.066	50.3	42.8	63.5	44.7	50.9	59.9
J075	chr16	53675122	53686432	TRUE	OK	48.2	0.0197	0.05796	0.6435	0.511	0.256	44.4	21.9	60.4	60.6	47.0	55.1
J076	chr16	53686576	53687862	TRUE	OK	41.3	0.0124	0.506	0.8578	0.144	0.072	54.2	21.9	47.3	40.7	39.2	44.5
J077	chr16	53687965	53692065	TRUE	OK	44.8	0.0276	0.3152	0.7961	0.266	0.133	55.2	18.8	54.4	52.6	43.1	44.5
J078	chr16	53692364	53696150	TRUE	OK	52.8	0.0302	0.4423	0.837	0.193	0.096	61.1	25.0	69.5	45.7	54.8	60.9
J079	chr16	53695458	53696150	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0188	0.2481	NA	NA	NA	5.9	6.3	5.0	5.0	10.8	7.7
J080	chr16	53696295	53700638	TRUE	OK	110.5	0.00404	0.26	0.7792	-0.179	-0.089	134.1	112.6	118.9	91.3	105.8	100.6
J081	chr16	53700726	53703802	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0495	0.4934	NA	NA	NA	2.0	1.0	1.0	2.0	2.0	1.9
J082	chr16	53700730	53703227	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0754	0.1026	NA	NA	NA	1.0	1.0	0.0	1.0	3.9	1.9
J083	chr16	53700730	53703554	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.249	0.2601	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	0.0
J084	chr16	53700730	53703802	TRUE	OK	48.2	0.00369	0.03344	0.5673	-0.430	-0.215	66.1	52.1	53.4	38.7	34.3	44.5
J085	chr16	53703261	53703554	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000103494.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE