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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 101177877 | 101177996 | TRUE | OK | 31.9 | 0.00994 | 0.03998 | 0.5935 | 0.554 | 0.277 | 23.7 | 25.0 | 33.2 | 38.7 | 29.4 | 41.6 |
E002 | chr8 | 101177996 | 101178387 | TRUE | OK | 54.4 | 0.0108 | 0.7171 | 0.9251 | -0.086 | -0.043 | 46.3 | 58.4 | 70.5 | 59.6 | 46.0 | 45.4 |
E003 | chr8 | 101197051 | 101198725 | TRUE | OK | 173.8 | 0.00542 | 0.9371 | 0.9852 | -0.006 | -0.003 | 172.6 | 190.8 | 182.3 | 192.6 | 142.0 | 162.4 |
E004 | chr8 | 101198725 | 101198923 | TRUE | OK | 42.0 | 0.00904 | 0.5608 | 0.8751 | -0.134 | -0.067 | 50.3 | 41.7 | 45.3 | 47.7 | 33.3 | 33.8 |
E005 | chr8 | 101198923 | 101198932 | TRUE | OK | 35.5 | 0.00799 | 0.8297 | 0.9576 | -0.052 | -0.026 | 45.4 | 35.5 | 32.2 | 37.7 | 30.4 | 31.9 |
E006 | chr8 | 101198932 | 101198936 | TRUE | OK | 46.1 | 0.00435 | 0.3784 | 0.8163 | -0.181 | -0.090 | 48.3 | 56.3 | 48.3 | 43.7 | 37.2 | 42.5 |
E007 | chr8 | 101198936 | 101198937 | TRUE | OK | 60.2 | 0.0047 | 0.7551 | 0.9368 | -0.063 | -0.032 | 56.2 | 81.3 | 55.4 | 53.6 | 55.8 | 59.0 |
E008 | chr8 | 101198937 | 101198938 | TRUE | OK | 61.7 | 0.00435 | 0.8599 | 0.9658 | -0.036 | -0.018 | 58.2 | 81.3 | 56.4 | 56.6 | 56.8 | 60.9 |
E009 | chr8 | 101198938 | 101199159 | TRUE | OK | 1236.7 | 0.00598 | 0.1191 | 0.7153 | -0.221 | -0.110 | 1222.7 | 1628.7 | 1227.8 | 1175.5 | 1049.8 | 1115.7 |
E010 | chr8 | 101199159 | 101199194 | TRUE | OK | 1249.0 | 0.00646 | 0.11 | 0.708 | -0.235 | -0.117 | 1258.1 | 1654.8 | 1218.7 | 1178.4 | 1054.7 | 1129.3 |
E011 | chr8 | 101199194 | 101199239 | TRUE | OK | 1362.6 | 0.0063 | 0.1062 | 0.7038 | -0.232 | -0.116 | 1365.6 | 1774.7 | 1355.7 | 1295.6 | 1136.0 | 1248.2 |
E012 | chr8 | 101199989 | 101200035 | TRUE | OK | 1651.5 | 0.00368 | 0.1013 | 0.6992 | -0.181 | -0.091 | 1680.2 | 2048.9 | 1640.8 | 1592.4 | 1450.3 | 1496.7 |
E013 | chr8 | 101200035 | 101200093 | TRUE | OK | 1965.4 | 0.00246 | 0.5836 | 0.8825 | -0.051 | -0.026 | 1999.6 | 2300.2 | 1917.8 | 1934.0 | 1811.7 | 1829.3 |
E014 | chr8 | 101200093 | 101200097 | TRUE | OK | 1585.5 | 0.00208 | 0.4054 | 0.8255 | 0.072 | 0.036 | 1616.1 | 1744.5 | 1533.0 | 1604.3 | 1509.1 | 1506.3 |
E015 | chr8 | 101200097 | 101200123 | TRUE | OK | 45.5 | 0.0105 | 0.3627 | 0.8114 | 0.233 | 0.116 | 41.4 | 49.0 | 41.3 | 50.6 | 57.8 | 32.9 |
E016 | chr8 | 101200123 | 101200288 | TRUE | OK | 18.0 | 0.0231 | 0.8979 | 0.9756 | -0.047 | -0.024 | 24.7 | 12.5 | 20.1 | 13.9 | 20.6 | 16.4 |
E017 | chr8 | 101200767 | 101201004 | TRUE | OK | 13.6 | 0.0342 | 0.4513 | 0.8398 | 0.367 | 0.184 | 14.8 | 10.4 | 12.1 | 8.9 | 22.5 | 12.6 |
E018 | chr8 | 101201219 | 101201606 | TRUE | OK | 20.2 | 0.0146 | 0.8045 | 0.9511 | 0.084 | 0.042 | 26.6 | 17.7 | 17.1 | 16.9 | 18.6 | 24.2 |
E019 | chr8 | 101201606 | 101201614 | TRUE | OK | 1546.9 | 0.00232 | 0.3507 | 0.8076 | 0.084 | 0.042 | 1577.6 | 1700.7 | 1482.6 | 1571.6 | 1467.0 | 1482.2 |
E020 | chr8 | 101201614 | 101201657 | TRUE | OK | 1662.7 | 0.00301 | 0.6206 | 0.8947 | 0.050 | 0.025 | 1724.5 | 1836.2 | 1596.4 | 1669.9 | 1553.1 | 1596.2 |
E021 | chr8 | 101201657 | 101201715 | TRUE | OK | 1890.9 | 0.00494 | 0.4175 | 0.8293 | 0.103 | 0.052 | 2001.6 | 2014.5 | 1794.9 | 1865.5 | 1805.8 | 1863.1 |
E022 | chr8 | 101201715 | 101201743 | TRUE | OK | 1402.4 | 0.00752 | 0.5518 | 0.8723 | 0.092 | 0.046 | 1543.1 | 1446.3 | 1314.4 | 1379.0 | 1314.2 | 1417.4 |
E023 | chr8 | 101202332 | 101202447 | TRUE | OK | 92.1 | 0.00378 | 0.02613 | 0.5319 | 0.361 | 0.180 | 88.7 | 87.6 | 78.6 | 95.3 | 92.1 | 110.2 |
E024 | chr8 | 101202447 | 101202452 | TRUE | OK | 31.7 | 0.00752 | 0.2215 | 0.7653 | 0.311 | 0.156 | 31.6 | 35.5 | 22.2 | 27.8 | 36.2 | 36.7 |
E025 | chr8 | 101202452 | 101204649 | TRUE | OK | 378.4 | 0.0266 | 0.09943 | 0.6974 | 0.504 | 0.252 | 350.0 | 314.9 | 340.4 | 282.9 | 494.5 | 487.3 |
E026 | chr8 | 101204649 | 101204693 | TRUE | OK | 77.5 | 0.0279 | 0.008737 | 0.3731 | 0.828 | 0.414 | 72.0 | 42.8 | 63.5 | 73.5 | 119.5 | 93.8 |
E027 | chr8 | 101204693 | 101204701 | TRUE | OK | 43.9 | 0.0314 | 0.001453 | 0.1622 | 1.145 | 0.572 | 36.5 | 21.9 | 29.2 | 39.7 | 76.4 | 59.9 |
E028 | chr8 | 101204701 | 101204779 | TRUE | OK | 63.3 | 0.0134 | 2.771e-05 | 0.01204 | 1.048 | 0.524 | 49.3 | 36.5 | 46.3 | 68.5 | 100.9 | 78.3 |
E029 | chr8 | 101204779 | 101205210 | TRUE | OK | 114.0 | 0.0168 | 0.0004277 | 0.0809 | 0.872 | 0.436 | 93.7 | 68.8 | 95.7 | 120.1 | 171.4 | 134.4 |
E030 | chr8 | 101205210 | 101205287 | TRUE | OK | 34.1 | 0.0143 | 0.4255 | 0.8315 | 0.227 | 0.113 | 42.4 | 26.1 | 30.2 | 31.8 | 40.2 | 33.8 |
E031 | chr8 | 101205287 | 101205329 | TRUE | OK | 13.2 | 0.0276 | 0.7815 | 0.9449 | -0.132 | -0.066 | 21.7 | 11.5 | 10.1 | 12.9 | 11.8 | 11.6 |
E032 | chr8 | 101205434 | 101205461 | TRUE | OK | 1289.7 | 0.00745 | 0.6272 | 0.8968 | 0.077 | 0.038 | 1430.7 | 1291.9 | 1246.9 | 1254.9 | 1233.9 | 1280.1 |
E033 | chr8 | 101205461 | 101205474 | TRUE | OK | 1170.6 | 0.00595 | 0.6941 | 0.9181 | 0.058 | 0.029 | 1280.8 | 1178.3 | 1158.3 | 1119.9 | 1127.2 | 1159.2 |
E034 | chr8 | 101205474 | 101205507 | TRUE | OK | 1241.2 | 0.00443 | 0.9488 | 0.988 | 0.012 | 0.006 | 1346.9 | 1287.8 | 1243.9 | 1213.2 | 1177.1 | 1178.6 |
E035 | chr8 | 101205507 | 101205568 | TRUE | OK | 1107.0 | 0.00448 | 0.7085 | 0.9225 | -0.039 | -0.020 | 1195.0 | 1157.4 | 1150.2 | 1096.0 | 1009.6 | 1033.5 |
E036 | chr8 | 101205568 | 101205673 | TRUE | OK | 918.7 | 0.00452 | 0.3394 | 0.8038 | -0.109 | -0.055 | 1003.8 | 993.7 | 963.9 | 923.3 | 809.9 | 817.9 |
E037 | chr8 | 101205673 | 101205682 | TRUE | OK | 99.4 | 0.0193 | 0.1134 | 0.7113 | -0.384 | -0.192 | 104.5 | 127.2 | 117.8 | 113.2 | 75.4 | 58.0 |
E038 | chr8 | 101205682 | 101205732 | TRUE | OK | 77.7 | 0.0151 | 0.03983 | 0.5932 | -0.490 | -0.245 | 83.8 | 107.4 | 90.7 | 77.4 | 66.6 | 40.6 |
E039 | chr8 | 101205853 | 101206064 | TRUE | OK | 34.3 | 0.00728 | 0.3383 | 0.8035 | 0.239 | 0.120 | 39.4 | 30.2 | 29.2 | 38.7 | 37.2 | 30.9 |
E040 | chr8 | 101206064 | 101206193 | TRUE | OK | 28.9 | 0.00818 | 0.7669 | 0.9403 | 0.084 | 0.042 | 32.5 | 28.2 | 27.2 | 31.8 | 32.3 | 21.3 |
J041 | chr8 | 101178387 | 101199194 | TRUE | OK | 11.0 | 0.00926 | 0.8099 | 0.9525 | -0.093 | -0.046 | 9.9 | 13.6 | 12.1 | 11.9 | 9.8 | 8.7 |
J042 | chr8 | 101178387 | 101199989 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.276 | 0.9516 | NA | NA | NA | 6.9 | 0.0 | 10.1 | 7.9 | 4.9 | 1.9 |
J043 | chr8 | 101199239 | 101199989 | TRUE | OK | 1192.1 | 0.00597 | 0.1712 | 0.7445 | -0.193 | -0.096 | 1191.1 | 1546.4 | 1172.4 | 1132.8 | 993.0 | 1116.7 |
J044 | chr8 | 101199239 | 101201606 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.24 | 0.5947 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 1.0 | 0.0 | 3.9 |
J045 | chr8 | 101200097 | 101200767 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J046 | chr8 | 101200097 | 101201606 | TRUE | OK | 1508.2 | 0.00156 | 0.2715 | 0.7826 | 0.085 | 0.042 | 1518.5 | 1660.0 | 1461.5 | 1538.8 | 1437.6 | 1432.9 |
J047 | chr8 | 101200123 | 101201606 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.0383 | 0.3453 | NA | NA | NA | 8.9 | 8.3 | 1.0 | 7.9 | 7.8 | 7.7 |
J048 | chr8 | 101201004 | 101201606 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.5832 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J049 | chr8 | 101201743 | 101202332 | TRUE | OK | 58.2 | 0.0025 | 0.02659 | 0.5345 | 0.393 | 0.197 | 51.3 | 55.3 | 52.4 | 65.5 | 63.7 | 60.9 |
J050 | chr8 | 101201743 | 101204649 | TRUE | OK | 16.0 | 0.00935 | 0.0003297 | 0.06834 | 1.247 | 0.624 | 10.8 | 5.2 | 14.1 | 22.8 | 21.5 | 21.3 |
J051 | chr8 | 101201743 | 101205434 | TRUE | OK | 1013.4 | 0.00872 | 0.8125 | 0.9533 | 0.039 | 0.020 | 1168.4 | 1026.0 | 949.8 | 980.9 | 946.0 | 1009.4 |
J052 | chr8 | 101201743 | 101205853 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0294 | 0.6822 | NA | NA | NA | 6.9 | 10.4 | 3.0 | 6.9 | 2.9 | 5.8 |
J053 | chr8 | 101202447 | 101204649 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0162 | 0.169 | NA | NA | NA | 7.9 | 3.1 | 7.1 | 9.9 | 6.9 | 9.7 |
J054 | chr8 | 101202447 | 101205434 | TRUE | OK | 14.4 | 0.0224 | 0.4457 | 0.838 | 0.315 | 0.158 | 15.8 | 14.6 | 10.1 | 10.9 | 12.7 | 22.2 |
J055 | chr8 | 101202452 | 101205853 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J056 | chr8 | 101204693 | 101205434 | TRUE | OK | 13.7 | 0.0117 | 0.7944 | 0.9483 | -0.091 | -0.046 | 18.7 | 12.5 | 13.1 | 9.9 | 11.8 | 16.4 |
J057 | chr8 | 101204779 | 101205210 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.266 | 0.9707 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000120963.12 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |