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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 176392454 | 176392641 | TRUE | OK | 3115.3 | 0.00759 | 0.3281 | 0.8004 | -0.164 | -0.082 | 3014.2 | 4486.8 | 2815.2 | 3029.0 | 2485.4 | 2860.9 |
E002 | chr5 | 176392641 | 176392648 | TRUE | OK | 3335.5 | 0.00802 | 0.523 | 0.8632 | -0.120 | -0.060 | 3187.8 | 4775.7 | 2944.1 | 3243.4 | 2734.1 | 3127.7 |
E003 | chr5 | 176392648 | 176392792 | TRUE | OK | 9468.2 | 0.0102 | 0.9333 | 0.9843 | -0.035 | -0.018 | 8980.6 | 12664.9 | 8511.0 | 9334.2 | 8102.6 | 9215.9 |
E004 | chr5 | 176392792 | 176392932 | TRUE | OK | 13464.3 | 0.0134 | 0.3918 | 0.821 | 0.147 | 0.073 | 12706.7 | 16649.1 | 12105.8 | 13622.1 | 12165.6 | 13536.7 |
E005 | chr5 | 176392932 | 176392935 | TRUE | OK | 9261.0 | 0.0128 | 0.1985 | 0.7569 | 0.245 | 0.122 | 9036.8 | 10464.7 | 8169.6 | 9694.6 | 8429.6 | 9770.9 |
E006 | chr5 | 176392935 | 176392945 | TRUE | OK | 9598.7 | 0.0131 | 0.1999 | 0.7578 | 0.246 | 0.123 | 9380.9 | 10867.2 | 8451.6 | 10038.1 | 8744.0 | 10110.2 |
E007 | chr5 | 176396478 | 176396532 | TRUE | OK | 54.6 | 0.00595 | 0.3745 | 0.8148 | 0.187 | 0.094 | 52.3 | 59.4 | 50.4 | 59.6 | 46.0 | 59.9 |
E008 | chr5 | 176397606 | 176397718 | TRUE | OK | 12742.5 | 0.0162 | 0.1337 | 0.7255 | 0.312 | 0.156 | 12284.7 | 14510.5 | 11177.2 | 13202.1 | 11909.0 | 13371.4 |
E009 | chr5 | 176397929 | 176397943 | TRUE | OK | 6117.3 | 0.0083 | 0.09756 | 0.6965 | 0.251 | 0.125 | 5711.0 | 7054.0 | 5315.1 | 6292.3 | 5807.1 | 6524.2 |
E010 | chr5 | 176397943 | 176398047 | TRUE | OK | 7947.2 | 0.00844 | 0.13 | 0.7233 | 0.231 | 0.116 | 7564.7 | 9159.2 | 7012.3 | 8160.7 | 7529.7 | 8256.8 |
E011 | chr5 | 176405589 | 176405822 | TRUE | OK | 52.0 | 0.00611 | 0.1715 | 0.7446 | 0.293 | 0.146 | 49.3 | 51.1 | 48.3 | 49.6 | 60.7 | 53.2 |
E012 | chr5 | 176406156 | 176406166 | TRUE | OK | 50.0 | 0.00464 | 0.2914 | 0.7891 | 0.213 | 0.107 | 40.4 | 59.4 | 47.3 | 48.6 | 55.8 | 48.3 |
E013 | chr5 | 176406166 | 176406340 | TRUE | OK | 100.5 | 0.00422 | 0.1586 | 0.7383 | 0.227 | 0.113 | 78.9 | 116.8 | 98.7 | 100.3 | 115.6 | 92.8 |
E014 | chr5 | 176406340 | 176406537 | TRUE | OK | 104.6 | 0.00921 | 0.06343 | 0.6527 | 0.369 | 0.184 | 80.9 | 106.4 | 103.7 | 102.3 | 116.5 | 118.0 |
E015 | chr5 | 176406537 | 176406708 | TRUE | OK | 105.3 | 0.0165 | 0.1516 | 0.7354 | 0.363 | 0.182 | 97.6 | 95.9 | 99.7 | 94.3 | 118.5 | 125.7 |
E016 | chr5 | 176407552 | 176407591 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0408 | 0.7592 | NA | NA | NA | 3.9 | 5.2 | 8.1 | 3.0 | 7.8 | 6.8 |
E017 | chr5 | 176410256 | 176410303 | TRUE | OK | 7242.0 | 0.00492 | 0.1595 | 0.7387 | 0.168 | 0.084 | 6966.2 | 8383.5 | 6592.3 | 7537.3 | 6859.9 | 7113.0 |
E018 | chr5 | 176416176 | 176416261 | TRUE | OK | 8620.8 | 0.00199 | 0.6359 | 0.8998 | -0.023 | -0.012 | 8614.8 | 10542.9 | 8235.1 | 9081.0 | 8247.5 | 7003.8 |
E019 | chr5 | 176416261 | 176416363 | TRUE | OK | 9330.5 | 0.0238 | 0.2654 | 0.7809 | -0.233 | -0.117 | 9454.8 | 12119.5 | 9437.7 | 10194.0 | 9341.3 | 5435.6 |
E020 | chr5 | 176416363 | 176416538 | TRUE | OK | 6528.3 | 0.0767 | 0.2157 | 0.7633 | -0.414 | -0.207 | 6756.1 | 9071.7 | 6957.9 | 7408.2 | 6755.1 | 2220.8 |
E021 | chr5 | 176416538 | 176416539 | TRUE | OK | 187.9 | 0.451 | 0.3574 | 0.81 | -0.461 | -0.230 | 220.9 | 245.0 | 215.5 | 243.2 | 191.0 | 11.6 |
E022 | chr5 | 176416539 | 176416569 | TRUE | OK | 183.9 | 0.465 | 0.3535 | 0.8084 | -0.479 | -0.240 | 216.9 | 240.9 | 212.5 | 233.3 | 189.0 | 10.6 |
J023 | chr5 | 176392932 | 176397943 | TRUE | OK | 103.1 | 0.0129 | 0.3859 | 0.8189 | 0.207 | 0.103 | 87.8 | 98.0 | 117.8 | 108.2 | 120.5 | 86.0 |
J024 | chr5 | 176392935 | 176410256 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0476 | 0.6116 | NA | NA | NA | 2.0 | 5.2 | 3.0 | 3.0 | 0.0 | 3.9 |
J025 | chr5 | 176392945 | 176396478 | TRUE | OK | 39.0 | 0.0106 | 0.8739 | 0.9694 | 0.046 | 0.023 | 40.4 | 44.8 | 36.3 | 37.7 | 29.4 | 45.4 |
J026 | chr5 | 176392945 | 176397606 | TRUE | OK | 9221.0 | 0.0133 | 0.1797 | 0.7488 | 0.261 | 0.130 | 9030.9 | 10332.3 | 8084.0 | 9664.8 | 8447.3 | 9767.0 |
J027 | chr5 | 176396532 | 176397606 | TRUE | OK | 43.0 | 0.00979 | 0.6502 | 0.9044 | 0.119 | 0.060 | 43.4 | 44.8 | 42.3 | 43.7 | 34.3 | 49.3 |
J028 | chr5 | 176397718 | 176397929 | TRUE | OK | 6004.0 | 0.00824 | 0.08922 | 0.6885 | 0.256 | 0.128 | 5586.7 | 6911.1 | 5213.4 | 6166.2 | 5720.0 | 6426.6 |
J029 | chr5 | 176398047 | 176406156 | TRUE | OK | 28.6 | 0.00566 | 0.8548 | 0.9644 | 0.040 | 0.020 | 21.7 | 41.7 | 26.2 | 24.8 | 30.4 | 27.1 |
J030 | chr5 | 176398047 | 176410256 | TRUE | OK | 4473.9 | 0.00842 | 0.2385 | 0.7716 | 0.184 | 0.092 | 4389.7 | 5093.7 | 3935.2 | 4544.0 | 4158.0 | 4723.0 |
J031 | chr5 | 176405822 | 176406156 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0936 | 0.2376 | NA | NA | NA | 0.0 | 3.1 | 3.0 | 0.0 | 1.0 | 1.0 |
J032 | chr5 | 176406708 | 176407552 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.258 | 0.1048 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 3.9 |
J033 | chr5 | 176406708 | 176410256 | TRUE | OK | 49.7 | 0.0182 | 0.5423 | 0.8695 | 0.185 | 0.092 | 49.3 | 46.9 | 51.4 | 39.7 | 53.9 | 57.0 |
J034 | chr5 | 176410303 | 176416176 | TRUE | OK | 5917.8 | 0.00362 | 0.1456 | 0.733 | 0.153 | 0.076 | 5722.8 | 6773.5 | 5460.2 | 6208.9 | 5644.6 | 5696.6 |
N035 | chr5 | 176410303 | 176410627 | TRUE | OK | 14.0 | 0.0352 | 0.07477 | 0.6699 | 0.836 | 0.418 | 11.8 | 11.5 | 9.1 | 10.9 | 26.4 | 14.5 |
N036 | chr5 | 176410303 | 176411306 | TRUE | OK | 25.7 | 0.00898 | 1.136e-06 | 0.0009331 | 1.411 | 0.705 | 14.8 | 21.9 | 9.1 | 31.8 | 38.2 | 38.7 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000175416.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |