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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr7 | 44796679 | 44796680 | TRUE | OK | 113.2 | 0.00848 | 0.5398 | 0.8689 | 0.122 | 0.061 | 89.7 | 115.7 | 126.9 | 118.1 | 104.8 | 123.8 |
E002 | chr7 | 44796680 | 44796681 | TRUE | OK | 130.3 | 0.00698 | 0.5182 | 0.8618 | 0.118 | 0.059 | 103.5 | 137.6 | 142.0 | 131.0 | 121.4 | 146.0 |
E003 | chr7 | 44796681 | 44796793 | TRUE | OK | 40533.5 | 0.00325 | 0.01302 | 0.4266 | 0.250 | 0.125 | 36506.0 | 43937.1 | 37467.7 | 40248.7 | 41795.7 | 43245.6 |
E004 | chr7 | 44797972 | 44798747 | TRUE | OK | 620.7 | 0.0193 | 0.1927 | 0.7547 | -0.275 | -0.138 | 658.7 | 665.3 | 752.4 | 410.0 | 651.2 | 586.9 |
E005 | chr7 | 44798747 | 44798813 | TRUE | OK | 798.7 | 0.0068 | 0.05913 | 0.646 | -0.257 | -0.128 | 875.6 | 888.4 | 892.4 | 652.3 | 734.5 | 749.3 |
E006 | chr7 | 44798813 | 44798814 | TRUE | OK | 688.7 | 0.00646 | 0.08533 | 0.6839 | -0.229 | -0.115 | 749.4 | 762.2 | 759.4 | 569.9 | 642.4 | 648.7 |
E007 | chr7 | 44798814 | 44798851 | TRUE | OK | 498.0 | 0.0101 | 0.3697 | 0.8134 | -0.141 | -0.070 | 539.3 | 513.0 | 544.9 | 406.1 | 495.5 | 489.2 |
E008 | chr7 | 44798851 | 44798904 | TRUE | OK | 432.3 | 0.00823 | 0.1845 | 0.7506 | -0.197 | -0.098 | 453.6 | 476.5 | 481.5 | 336.6 | 426.0 | 419.6 |
E009 | chr7 | 44798904 | 44799246 | TRUE | OK | 1032.2 | 0.00316 | 0.06722 | 0.6585 | -0.177 | -0.089 | 997.8 | 1294.0 | 1057.6 | 870.7 | 1055.7 | 917.5 |
E010 | chr7 | 44799246 | 44799277 | TRUE | OK | 44900.4 | 0.00338 | 0.01846 | 0.4793 | 0.243 | 0.121 | 40682.7 | 48994.3 | 41628.5 | 44658.6 | 45831.3 | 47607.0 |
E011 | chr7 | 44799388 | 44799391 | TRUE | OK | 454.5 | 0.0669 | 0.6302 | 0.8977 | -0.046 | -0.023 | 480.2 | 483.8 | 449.2 | 434.8 | 677.7 | 201.1 |
E012 | chr7 | 44799391 | 44799480 | TRUE | OK | 55982.4 | 0.00597 | 0.05355 | 0.6339 | 0.270 | 0.135 | 52056.3 | 61053.3 | 51527.5 | 56249.5 | 55454.7 | 59553.3 |
E013 | chr7 | 44799480 | 44799701 | TRUE | OK | 571.7 | 0.021 | 0.1446 | 0.7323 | -0.316 | -0.158 | 621.2 | 714.3 | 600.3 | 596.7 | 559.2 | 338.4 |
E014 | chr7 | 44799701 | 44799816 | TRUE | OK | 50968.5 | 0.00732 | 0.7244 | 0.9275 | 0.065 | 0.032 | 49593.3 | 58129.5 | 46679.7 | 51293.5 | 46960.4 | 53154.7 |
E015 | chr7 | 44799816 | 44799874 | TRUE | OK | 36092.9 | 0.00431 | 0.6585 | 0.9071 | -0.044 | -0.022 | 35669.8 | 43400.1 | 32503.1 | 36263.6 | 32661.9 | 36059.1 |
E016 | chr7 | 44799874 | 44800011 | TRUE | OK | 415.6 | 0.00924 | 0.8513 | 0.9636 | -0.011 | -0.005 | 401.3 | 461.9 | 414.0 | 395.1 | 483.8 | 337.4 |
E017 | chr7 | 44800423 | 44800543 | TRUE | OK | 110.2 | 0.0154 | 0.9746 | 0.9938 | 0.026 | 0.013 | 105.5 | 102.2 | 126.9 | 88.4 | 122.4 | 116.0 |
E018 | chr7 | 44801286 | 44801624 | TRUE | OK | 48346.8 | 0.0043 | 0.1268 | 0.7213 | -0.181 | -0.091 | 46009.1 | 63218.0 | 43454.6 | 46650.2 | 44474.0 | 46274.7 |
E019 | chr7 | 44801624 | 44801630 | TRUE | OK | 954.7 | 0.00396 | 0.4172 | 0.8293 | -0.084 | -0.042 | 1011.6 | 1120.9 | 873.3 | 961.0 | 832.4 | 929.1 |
E020 | chr7 | 44801630 | 44801631 | TRUE | OK | 687.0 | 0.00508 | 0.2425 | 0.773 | -0.136 | -0.068 | 737.5 | 767.4 | 695.0 | 681.1 | 589.5 | 651.6 |
E021 | chr7 | 44801631 | 44801647 | TRUE | OK | 677.0 | 0.00518 | 0.2543 | 0.7771 | -0.134 | -0.067 | 729.6 | 752.8 | 683.9 | 671.1 | 584.6 | 640.0 |
E022 | chr7 | 44801647 | 44803117 | TRUE | OK | 2483.0 | 0.00416 | 0.03226 | 0.5623 | -0.225 | -0.112 | 2703.6 | 2926.9 | 2536.2 | 2401.6 | 2168.1 | 2161.8 |
E023 | chr7 | 44821993 | 44822058 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.936 | 0.3683 | NA | NA | NA | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E024 | chr7 | 44823139 | 44823375 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.857 | 0.5977 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E025 | chr7 | 44824426 | 44824564 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J026 | chr7 | 44796793 | 44798747 | TRUE | OK | 381.3 | 0.0043 | 0.01275 | 0.4232 | -0.302 | -0.151 | 446.7 | 450.5 | 388.8 | 315.7 | 342.7 | 343.2 |
J027 | chr7 | 44796793 | 44799246 | TRUE | OK | 39990.2 | 0.00296 | 0.007264 | 0.3456 | 0.257 | 0.129 | 35873.0 | 43283.3 | 36937.9 | 39761.2 | 41326.6 | 42759.3 |
J028 | chr7 | 44796793 | 44821993 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.662 | 0.3703 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J029 | chr7 | 44798814 | 44799246 | TRUE | OK | 253.4 | 0.00163 | 1.103e-06 | 0.0009079 | -0.483 | -0.241 | 279.0 | 327.4 | 295.1 | 202.5 | 208.6 | 207.9 |
J030 | chr7 | 44798851 | 44799388 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.077 | 0.7321 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 1.0 | 0.0 | 1.9 |
J031 | chr7 | 44798904 | 44799246 | TRUE | OK | 223.6 | 0.00605 | 0.3197 | 0.7976 | -0.139 | -0.070 | 255.4 | 241.9 | 219.6 | 195.6 | 204.7 | 224.3 |
J032 | chr7 | 44799277 | 44799391 | TRUE | OK | 43069.9 | 0.00328 | 0.01418 | 0.44 | 0.249 | 0.124 | 39096.2 | 46833.8 | 39676.5 | 42746.5 | 43875.7 | 46190.6 |
J033 | chr7 | 44799480 | 44799701 | TRUE | OK | 33957.5 | 0.00652 | 0.6201 | 0.8945 | 0.082 | 0.041 | 32759.2 | 37822.6 | 31493.8 | 34346.5 | 30729.8 | 36592.8 |
J034 | chr7 | 44799874 | 44800423 | TRUE | OK | 18.6 | 0.0301 | 0.2534 | 0.7767 | -0.451 | -0.226 | 28.6 | 14.6 | 22.2 | 14.9 | 14.7 | 16.4 |
J035 | chr7 | 44799874 | 44801286 | TRUE | OK | 28466.3 | 0.00194 | 0.8038 | 0.9509 | 0.016 | 0.008 | 27095.5 | 34655.8 | 25066.8 | 28202.2 | 26741.2 | 29036.0 |
J036 | chr7 | 44800543 | 44801286 | TRUE | OK | 34.5 | 0.00644 | 0.3527 | 0.8082 | 0.235 | 0.117 | 29.6 | 34.4 | 33.2 | 30.8 | 32.3 | 46.4 |
J037 | chr7 | 44822058 | 44823139 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J038 | chr7 | 44823375 | 44824426 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N039 | chr7 | 44796793 | 44797519 | TRUE | OK | 36.4 | 0.0116 | 0.9615 | 0.9911 | 0.027 | 0.014 | 34.5 | 34.4 | 41.3 | 43.7 | 35.3 | 29.0 |
N040 | chr7 | 44796793 | 44801286 | TRUE | OK | 38.7 | 0.0132 | 0.9708 | 0.993 | 0.000 | 0.000 | 43.4 | 44.8 | 30.2 | 42.7 | 26.4 | 44.5 |
N041 | chr7 | 44797621 | 44798747 | TRUE | OK | 13.1 | 0.0155 | 0.9272 | 0.9828 | -0.022 | -0.011 | 15.8 | 12.5 | 12.1 | 14.9 | 15.7 | 7.7 |
N042 | chr7 | 44797621 | 44799246 | TRUE | OK | 15.6 | 0.0539 | 0.3029 | 0.7923 | 0.512 | 0.256 | 17.7 | 15.6 | 6.0 | 26.8 | 13.7 | 13.5 |
N043 | chr7 | 44799277 | 44801286 | TRUE | OK | 11.8 | 0.0101 | 0.4436 | 0.8374 | 0.299 | 0.149 | 8.9 | 12.5 | 11.1 | 15.9 | 8.8 | 13.5 |
N044 | chr7 | 44799480 | 44801286 | TRUE | OK | 44.6 | 0.00533 | 0.5034 | 0.8568 | 0.142 | 0.071 | 38.5 | 57.3 | 34.2 | 52.6 | 48.0 | 36.7 |
N045 | chr7 | 44799880 | 44801286 | TRUE | OK | 14.4 | 0.00868 | 0.3781 | 0.8162 | 0.313 | 0.157 | 13.8 | 13.6 | 12.1 | 19.9 | 14.7 | 12.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000196262.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |