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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr15 | 74899991 | 74899992 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0608 | 0.8707 | NA | NA | NA | 2.0 | 3.1 | 2.0 | 4.0 | 2.9 | 1.0 |
E002 | chr15 | 74899992 | 74900137 | TRUE | OK | 211.9 | 0.0287 | 0.3198 | 0.7977 | -0.305 | -0.153 | 160.7 | 307.6 | 226.6 | 129.1 | 223.3 | 224.3 |
E003 | chr15 | 74900137 | 74900508 | TRUE | OK | 560.5 | 0.0145 | 0.8492 | 0.963 | -0.044 | -0.022 | 462.4 | 659.0 | 573.1 | 442.8 | 569.9 | 655.5 |
E004 | chr15 | 74900508 | 74900571 | TRUE | OK | 266.5 | 0.00545 | 0.6956 | 0.9185 | 0.057 | 0.029 | 263.3 | 268.0 | 250.8 | 231.3 | 270.3 | 315.2 |
E005 | chr15 | 74900571 | 74901168 | TRUE | OK | 625.1 | 0.00237 | 0.5399 | 0.8689 | -0.057 | -0.028 | 632.0 | 638.1 | 625.5 | 509.3 | 678.6 | 667.1 |
E006 | chr15 | 74901168 | 74901256 | TRUE | OK | 203.9 | 0.00831 | 0.6056 | 0.8897 | -0.080 | -0.040 | 239.6 | 186.6 | 198.4 | 149.9 | 243.8 | 205.0 |
E007 | chr15 | 74901256 | 74901821 | TRUE | OK | 524.3 | 0.00441 | 0.6786 | 0.9131 | -0.059 | -0.030 | 558.1 | 477.6 | 556.0 | 455.7 | 541.5 | 556.9 |
E008 | chr15 | 74901821 | 74901919 | TRUE | OK | 211.1 | 0.00816 | 0.6596 | 0.9074 | -0.091 | -0.046 | 230.7 | 178.3 | 239.7 | 192.6 | 202.7 | 222.4 |
E009 | chr15 | 74901919 | 74901949 | TRUE | OK | 162.3 | 0.0112 | 0.3326 | 0.8017 | -0.214 | -0.107 | 185.4 | 138.7 | 194.4 | 149.9 | 144.9 | 160.5 |
E010 | chr15 | 74901949 | 74902000 | TRUE | OK | 205.5 | 0.00213 | 0.5031 | 0.8567 | 0.078 | 0.039 | 187.3 | 185.6 | 225.6 | 172.7 | 247.8 | 213.7 |
E011 | chr15 | 74902000 | 74902063 | TRUE | OK | 203.8 | 0.00169 | 0.6123 | 0.8919 | -0.056 | -0.028 | 200.2 | 196.0 | 223.6 | 170.8 | 224.3 | 207.9 |
E012 | chr15 | 74902063 | 74902099 | TRUE | OK | 166.8 | 0.00714 | 0.2889 | 0.7881 | -0.196 | -0.098 | 177.5 | 139.7 | 212.5 | 141.0 | 171.4 | 158.6 |
E013 | chr15 | 74902099 | 74902468 | TRUE | OK | 343.8 | 0.00608 | 0.08383 | 0.6819 | -0.269 | -0.134 | 374.7 | 320.1 | 415.0 | 300.8 | 336.9 | 315.2 |
E014 | chr15 | 74902468 | 74902515 | TRUE | OK | 100.8 | 0.0054 | 0.7615 | 0.9388 | 0.048 | 0.024 | 103.5 | 98.0 | 94.7 | 99.3 | 115.6 | 93.8 |
E015 | chr15 | 74902515 | 74902529 | TRUE | OK | 95.1 | 0.00484 | 0.4694 | 0.8459 | 0.118 | 0.059 | 94.7 | 84.5 | 93.7 | 96.3 | 111.6 | 89.9 |
E016 | chr15 | 74902529 | 74902603 | TRUE | OK | 107.8 | 0.00995 | 0.5991 | 0.8877 | 0.094 | 0.047 | 122.3 | 86.5 | 102.7 | 107.2 | 123.4 | 104.4 |
E017 | chr15 | 74902603 | 74902625 | TRUE | OK | 173.4 | 0.00674 | 0.07241 | 0.6664 | 0.289 | 0.144 | 176.5 | 139.7 | 153.1 | 177.7 | 209.6 | 183.7 |
E018 | chr15 | 74902625 | 74902703 | TRUE | OK | 255.5 | 0.00497 | 0.1352 | 0.7264 | 0.215 | 0.107 | 262.3 | 217.9 | 231.7 | 223.4 | 326.1 | 271.7 |
E019 | chr15 | 74902703 | 74902708 | TRUE | OK | 210.8 | 0.00539 | 0.3342 | 0.8023 | 0.152 | 0.076 | 217.9 | 189.8 | 191.4 | 177.7 | 272.2 | 215.6 |
E020 | chr15 | 74902708 | 74902709 | TRUE | OK | 208.6 | 0.00536 | 0.3138 | 0.7955 | 0.157 | 0.078 | 216.9 | 186.6 | 188.4 | 177.7 | 267.3 | 214.6 |
E021 | chr15 | 74902709 | 74902783 | TRUE | OK | 277.5 | 0.00337 | 0.1434 | 0.7318 | 0.184 | 0.092 | 281.0 | 237.7 | 262.9 | 234.3 | 344.7 | 304.6 |
E022 | chr15 | 74902783 | 74902786 | TRUE | OK | 175.2 | 0.00241 | 0.06201 | 0.6507 | 0.233 | 0.117 | 169.6 | 147.0 | 167.2 | 149.9 | 212.5 | 205.0 |
E023 | chr15 | 74904663 | 74904712 | TRUE | OK | 248.9 | 0.00359 | 0.4205 | 0.8302 | 0.110 | 0.055 | 254.4 | 213.8 | 249.8 | 195.6 | 296.7 | 283.3 |
E024 | chr15 | 74904712 | 74904981 | TRUE | OK | 69.7 | 0.011 | 0.138 | 0.7284 | 0.337 | 0.168 | 63.1 | 43.8 | 77.6 | 55.6 | 96.0 | 82.2 |
E025 | chr15 | 74904981 | 74905025 | TRUE | OK | 72.0 | 0.0099 | 0.0004479 | 0.08304 | 0.798 | 0.399 | 58.2 | 45.9 | 54.4 | 57.6 | 106.7 | 109.3 |
E026 | chr15 | 74905025 | 74905039 | TRUE | OK | 61.3 | 0.00989 | 0.0001996 | 0.0497 | 0.875 | 0.437 | 47.3 | 38.6 | 44.3 | 49.6 | 91.1 | 96.7 |
E027 | chr15 | 74905039 | 74905059 | TRUE | OK | 52.0 | 0.024 | 0.02237 | 0.5087 | 0.761 | 0.381 | 43.4 | 31.3 | 41.3 | 34.7 | 73.4 | 88.0 |
E028 | chr15 | 74905059 | 74905153 | TRUE | OK | 39.6 | 0.0128 | 0.07352 | 0.6683 | 0.484 | 0.242 | 33.5 | 25.0 | 40.3 | 34.7 | 43.1 | 60.9 |
E029 | chr15 | 74905153 | 74905231 | TRUE | OK | 299.3 | 0.00463 | 0.2269 | 0.7676 | 0.168 | 0.084 | 298.8 | 244.0 | 305.2 | 242.2 | 349.6 | 355.8 |
E030 | chr15 | 74905231 | 74905848 | TRUE | OK | 59.2 | 0.0112 | 0.0196 | 0.4883 | 0.567 | 0.283 | 57.2 | 37.5 | 48.3 | 46.7 | 82.3 | 83.1 |
E031 | chr15 | 74905848 | 74906220 | TRUE | OK | 34.8 | 0.0129 | 0.4718 | 0.8467 | 0.205 | 0.103 | 34.5 | 21.9 | 40.3 | 23.8 | 44.1 | 44.5 |
E032 | chr15 | 74906220 | 74906277 | TRUE | OK | 19.5 | 0.00844 | 0.3626 | 0.8114 | 0.288 | 0.144 | 17.7 | 15.6 | 19.1 | 14.9 | 26.4 | 23.2 |
E033 | chr15 | 74906277 | 74906323 | TRUE | OK | 191.6 | 0.00386 | 0.01897 | 0.4831 | 0.324 | 0.162 | 185.4 | 146.0 | 181.3 | 165.8 | 248.7 | 222.4 |
E034 | chr15 | 74906323 | 74906341 | TRUE | OK | 179.7 | 0.00322 | 0.005522 | 0.3079 | 0.371 | 0.186 | 161.7 | 136.6 | 174.2 | 153.9 | 240.9 | 210.8 |
E035 | chr15 | 74906341 | 74906365 | TRUE | OK | 197.1 | 0.00359 | 0.005534 | 0.3081 | 0.375 | 0.188 | 177.5 | 151.2 | 189.4 | 172.7 | 270.3 | 221.4 |
E036 | chr15 | 74906365 | 74906586 | TRUE | OK | 15.9 | 0.0288 | 0.8307 | 0.958 | 0.120 | 0.060 | 9.9 | 16.7 | 19.1 | 6.9 | 22.5 | 20.3 |
E037 | chr15 | 74906586 | 74906613 | TRUE | OK | 242.4 | 0.00424 | 0.03114 | 0.5574 | 0.294 | 0.147 | 232.7 | 187.7 | 236.7 | 211.5 | 319.2 | 266.8 |
E038 | chr15 | 74906613 | 74906730 | TRUE | OK | 258.6 | 0.00602 | 0.06479 | 0.6548 | 0.285 | 0.142 | 241.6 | 200.2 | 261.9 | 225.4 | 352.5 | 269.7 |
E039 | chr15 | 74906730 | 74906793 | TRUE | OK | 145.9 | 0.00622 | 0.3895 | 0.8201 | 0.144 | 0.072 | 137.1 | 122.0 | 156.1 | 133.0 | 191.9 | 135.4 |
E040 | chr15 | 74906793 | 74906796 | TRUE | OK | 81.4 | 0.0167 | 0.2917 | 0.7891 | 0.283 | 0.141 | 76.9 | 60.5 | 82.6 | 78.4 | 122.4 | 67.7 |
E041 | chr15 | 74906796 | 74906805 | TRUE | OK | 70.5 | 0.0132 | 0.2883 | 0.788 | 0.264 | 0.132 | 70.0 | 55.3 | 66.5 | 69.5 | 101.8 | 59.9 |
E042 | chr15 | 74906805 | 74906807 | TRUE | OK | 47.5 | 0.0576 | 0.9015 | 0.9765 | 0.047 | 0.023 | 49.3 | 44.8 | 45.3 | 46.7 | 76.4 | 22.2 |
E043 | chr15 | 74906807 | 74906837 | TRUE | OK | 41.0 | 0.0573 | 0.8728 | 0.9691 | 0.027 | 0.013 | 44.4 | 40.7 | 36.3 | 38.7 | 66.6 | 19.3 |
E044 | chr15 | 74906837 | 74906842 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0352 | 0.719 | NA | NA | NA | 9.9 | 3.1 | 5.0 | 5.0 | 5.9 | 4.8 |
E045 | chr15 | 74906842 | 74906848 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0324 | 0.9383 | NA | NA | NA | 7.9 | 3.1 | 4.0 | 5.0 | 4.9 | 4.8 |
E046 | chr15 | 74906848 | 74906851 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0343 | 0.4209 | NA | NA | NA | 4.9 | 3.1 | 2.0 | 5.0 | 4.9 | 4.8 |
E047 | chr15 | 74906851 | 74906880 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0436 | 0.7899 | NA | NA | NA | 5.9 | 4.2 | 2.0 | 6.0 | 2.9 | 4.8 |
E048 | chr15 | 74906880 | 74906883 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.174 | 0.9784 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 3.0 | 0.0 | 2.9 |
J049 | chr15 | 74900137 | 74900508 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0562 | 0.3829 | NA | NA | NA | 3.9 | 1.0 | 2.0 | 2.0 | 1.0 | 1.0 |
J050 | chr15 | 74900137 | 74901168 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.255 | 0.2301 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J051 | chr15 | 74900137 | 74901949 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0113 | 0.0193 | NA | NA | NA | 10.8 | 10.4 | 16.1 | 6.0 | 6.9 | 5.8 |
J052 | chr15 | 74901256 | 74901949 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.215 | 0.2137 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 0.0 | 3.9 | 2.9 |
J053 | chr15 | 74902063 | 74902603 | TRUE | OK | 52.0 | 0.0031 | 0.03659 | 0.5816 | 0.394 | 0.197 | 40.4 | 43.8 | 50.4 | 55.6 | 61.7 | 59.9 |
J054 | chr15 | 74902783 | 74904663 | TRUE | OK | 42.9 | 0.00969 | 0.7784 | 0.9439 | -0.048 | -0.024 | 47.3 | 36.5 | 46.3 | 23.8 | 53.9 | 49.3 |
J055 | chr15 | 74902786 | 74904663 | TRUE | OK | 159.5 | 0.00215 | 0.04448 | 0.6087 | 0.251 | 0.126 | 158.7 | 135.6 | 143.0 | 139.0 | 194.9 | 185.6 |
J056 | chr15 | 74902786 | 74905153 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.147 | 0.338 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 0.0 | 0.0 | 1.0 |
J057 | chr15 | 74904712 | 74904981 | TRUE | OK | 33.2 | 0.0162 | 3.756e-05 | 0.01516 | 1.304 | 0.652 | 21.7 | 17.7 | 18.1 | 25.8 | 62.7 | 53.2 |
J058 | chr15 | 74904712 | 74905153 | TRUE | OK | 140.6 | 0.00195 | 0.06797 | 0.6595 | -0.228 | -0.114 | 152.8 | 138.7 | 160.1 | 104.2 | 138.1 | 149.9 |
J059 | chr15 | 74905039 | 74905153 | TRUE | OK | 10.0 | 0.0099 | 0.0003264 | 0.06803 | 1.564 | 0.782 | 4.9 | 5.2 | 5.0 | 13.9 | 15.7 | 15.5 |
J060 | chr15 | 74905059 | 74905153 | TRUE | OK | 23.0 | 0.0381 | 0.05065 | 0.627 | 0.886 | 0.443 | 19.7 | 13.6 | 15.1 | 12.9 | 34.3 | 42.5 |
J061 | chr15 | 74905231 | 74905848 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.581 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J062 | chr15 | 74905231 | 74906277 | TRUE | OK | 130.0 | 0.00237 | 0.06554 | 0.6555 | 0.249 | 0.124 | 130.2 | 104.3 | 121.9 | 111.2 | 159.6 | 152.8 |
J063 | chr15 | 74905231 | 74906323 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.13 | 0.9581 | NA | NA | NA | 3.9 | 1.0 | 11.1 | 3.0 | 8.8 | 3.9 |
J064 | chr15 | 74905231 | 74906586 | TRUE | OK | 54.7 | 0.0112 | 0.9453 | 0.987 | 0.005 | 0.002 | 64.1 | 37.5 | 61.4 | 46.7 | 55.8 | 62.8 |
J065 | chr15 | 74906365 | 74906586 | TRUE | OK | 160.2 | 0.00311 | 0.001139 | 0.1419 | 0.441 | 0.221 | 143.0 | 119.9 | 147.1 | 147.9 | 225.2 | 177.9 |
N066 | chr15 | 74900599 | 74901949 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0143 | 0.02251 | NA | NA | NA | 4.9 | 3.1 | 8.1 | 6.9 | 15.7 | 11.6 |
N067 | chr15 | 74900674 | 74901949 | TRUE | OK | 18.9 | 0.0401 | 0.2278 | 0.7682 | 0.502 | 0.251 | 7.9 | 25.0 | 14.1 | 14.9 | 25.5 | 26.1 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000178761.15 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |