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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr15 | 89608788 | 89608968 | TRUE | OK | 223.0 | 0.00846 | 0.06248 | 0.6511 | 0.315 | 0.157 | 247.5 | 121.0 | 233.7 | 268.1 | 207.6 | 260.1 |
| E002 | chr15 | 89618028 | 89618195 | TRUE | OK | 177.5 | 0.00244 | 0.169 | 0.7438 | 0.176 | 0.088 | 193.3 | 110.5 | 190.4 | 194.6 | 175.3 | 201.1 |
| E003 | chr15 | 89627976 | 89628600 | TRUE | OK | 90.3 | 0.0148 | 0.9409 | 0.986 | 0.048 | 0.024 | 85.8 | 80.3 | 93.7 | 81.4 | 99.9 | 100.6 |
| E004 | chr15 | 89628600 | 89628780 | TRUE | OK | 29.9 | 0.0178 | 0.2934 | 0.7896 | 0.325 | 0.163 | 20.7 | 19.8 | 37.3 | 30.8 | 36.2 | 34.8 |
| E005 | chr15 | 89628780 | 89628786 | TRUE | OK | 15.0 | 0.0104 | 0.1538 | 0.7362 | 0.501 | 0.250 | 12.8 | 8.3 | 15.1 | 19.9 | 16.6 | 17.4 |
| E006 | chr15 | 89628975 | 89629122 | TRUE | OK | 20.9 | 0.00783 | 0.1774 | 0.7479 | -0.410 | -0.205 | 28.6 | 17.7 | 23.2 | 18.9 | 18.6 | 18.4 |
| E007 | chr15 | 89629374 | 89629573 | TRUE | OK | 46.3 | 0.00477 | 0.8629 | 0.9666 | -0.041 | -0.020 | 55.2 | 33.4 | 48.3 | 42.7 | 49.0 | 49.3 |
| E008 | chr15 | 89630286 | 89630493 | TRUE | OK | 82.7 | 0.00365 | 0.4052 | 0.8255 | -0.149 | -0.074 | 108.5 | 58.4 | 85.6 | 88.4 | 72.5 | 83.1 |
| E009 | chr15 | 89631494 | 89631710 | TRUE | OK | 20.7 | 0.0565 | 0.1267 | 0.7213 | -0.721 | -0.360 | 35.5 | 12.5 | 27.2 | 26.8 | 6.9 | 15.5 |
| E010 | chr15 | 89632819 | 89632996 | TRUE | OK | 21.2 | 0.022 | 0.2078 | 0.7606 | -0.497 | -0.248 | 38.5 | 12.5 | 21.2 | 17.9 | 13.7 | 23.2 |
| E011 | chr15 | 89633140 | 89633266 | TRUE | OK | 26.4 | 0.0119 | 0.8929 | 0.9743 | -0.051 | -0.025 | 36.5 | 15.6 | 26.2 | 22.8 | 21.5 | 35.8 |
| E012 | chr15 | 89633685 | 89633883 | TRUE | OK | 27.4 | 0.00721 | 0.001065 | 0.137 | -0.889 | -0.445 | 39.4 | 28.2 | 36.3 | 22.8 | 14.7 | 23.2 |
| E013 | chr15 | 89642202 | 89642405 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.7 | 0.0238 | 0.03931 | NA | NA | NA | 8.9 | 5.2 | 9.1 | 3.0 | 3.9 | 3.9 |
| E014 | chr15 | 89645012 | 89645165 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0283 | 0.3238 | NA | NA | NA | 8.9 | 4.2 | 5.0 | 4.0 | 2.9 | 5.8 |
| E015 | chr15 | 89645335 | 89645451 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0947 | 0.7549 | NA | NA | NA | 5.9 | 6.3 | 1.0 | 4.0 | 3.9 | 8.7 |
| E016 | chr15 | 89645892 | 89646026 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.224 | 0.7275 | NA | NA | NA | 2.0 | 7.3 | 1.0 | 2.0 | 3.9 | 7.7 |
| E017 | chr15 | 89646829 | 89647057 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.174 | 0.8255 | NA | NA | NA | 3.9 | 6.3 | 0.0 | 3.0 | 2.9 | 2.9 |
| E018 | chr15 | 89647595 | 89647712 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0812 | 0.1733 | NA | NA | NA | 2.0 | 6.3 | 4.0 | 2.0 | 2.0 | 1.9 |
| E019 | chr15 | 89648254 | 89648502 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.4 | 0.343 | 0.1573 | NA | NA | NA | 0.0 | 5.2 | 6.0 | 2.0 | 0.0 | 1.0 |
| E020 | chr15 | 89648502 | 89648774 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.173 | 0.5004 | NA | NA | NA | 0.0 | 2.1 | 5.0 | 6.9 | 2.9 | 1.9 |
| E021 | chr15 | 89648973 | 89649367 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.165 | 0.6629 | NA | NA | NA | 1.0 | 7.3 | 5.0 | 9.9 | 5.9 | 2.9 |
| E022 | chr15 | 89649740 | 89649941 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.7 | 0.0464 | 0.8774 | NA | NA | NA | 2.0 | 5.2 | 3.0 | 5.0 | 2.9 | 3.9 |
| E023 | chr15 | 89649941 | 89650044 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.397 | 0.1235 | NA | NA | NA | 0.0 | 2.1 | 1.0 | 0.0 | 0.0 | 0.0 |
| E024 | chr15 | 89652602 | 89652954 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0295 | 0.2356 | NA | NA | NA | 6.9 | 5.2 | 6.0 | 2.0 | 3.9 | 5.8 |
| E025 | chr15 | 89655398 | 89655451 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.77 | 0.4358 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
| E026 | chr15 | 89655451 | 89655467 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J027 | chr15 | 89608968 | 89618028 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J028 | chr15 | 89618195 | 89628600 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J029 | chr15 | 89628786 | 89628975 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0715 | 0.2876 | NA | NA | NA | 3.9 | 1.0 | 4.0 | 4.0 | 0.0 | 1.0 |
| J030 | chr15 | 89629122 | 89629374 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0537 | 0.1214 | NA | NA | NA | 3.0 | 3.1 | 2.0 | 2.0 | 1.0 | 0.0 |
| J031 | chr15 | 89629573 | 89630286 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.225 | 0.5543 | NA | NA | NA | 2.0 | 2.1 | 0.0 | 6.0 | 1.0 | 1.0 |
| J032 | chr15 | 89630493 | 89631494 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0576 | 0.0003606 | NA | NA | NA | 4.9 | 1.0 | 5.0 | 0.0 | 0.0 | 0.0 |
| J033 | chr15 | 89631710 | 89632819 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.104 | 0.1186 | NA | NA | NA | 2.0 | 1.0 | 6.0 | 2.0 | 0.0 | 1.0 |
| J034 | chr15 | 89632996 | 89633140 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.9 | 0.21 | 0.3986 | NA | NA | NA | 10.8 | 2.1 | 5.0 | 3.0 | 0.0 | 8.7 |
| J035 | chr15 | 89633266 | 89633685 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0697 | 0.7144 | NA | NA | NA | 1.0 | 2.1 | 5.0 | 1.0 | 2.0 | 3.9 |
| J036 | chr15 | 89633883 | 89642202 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.0515 | 0.4747 | NA | NA | NA | 2.0 | 2.1 | 2.0 | 1.0 | 2.0 | 1.0 |
| J037 | chr15 | 89642405 | 89645012 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0392 | 0.01968 | NA | NA | NA | 5.9 | 2.1 | 4.0 | 0.0 | 2.0 | 1.0 |
| J038 | chr15 | 89645165 | 89645335 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0677 | 0.4854 | NA | NA | NA | 3.0 | 1.0 | 0.0 | 2.0 | 1.0 | 3.9 |
| J039 | chr15 | 89645451 | 89645892 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.206 | 0.7372 | NA | NA | NA | 2.0 | 6.3 | 1.0 | 2.0 | 2.9 | 7.7 |
| J040 | chr15 | 89646026 | 89646829 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.176 | 0.5437 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 |
| J041 | chr15 | 89647057 | 89647595 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.193 | 0.5622 | NA | NA | NA | 2.0 | 4.2 | 0.0 | 1.0 | 2.0 | 1.0 |
| J042 | chr15 | 89647712 | 89648254 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.202 | 0.1475 | NA | NA | NA | 0.0 | 3.1 | 4.0 | 1.0 | 0.0 | 1.0 |
| J043 | chr15 | 89648774 | 89648973 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0874 | 0.3764 | NA | NA | NA | 0.0 | 1.0 | 3.0 | 4.0 | 2.9 | 1.0 |
| J044 | chr15 | 89649367 | 89649740 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.0506 | 0.2865 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 3.0 | 2.0 | 1.9 |
| J045 | chr15 | 89649941 | 89652602 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0592 | 0.8636 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 2.0 | 1.0 | 1.9 |
| J046 | chr15 | 89650044 | 89652602 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J047 | chr15 | 89652954 | 89655398 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N048 | chr15 | 89606825 | 89608802 | TRUE | OK | 120.0 | 0.00559 | 0.2812 | 0.7853 | 0.168 | 0.084 | 143.0 | 66.7 | 122.9 | 147.9 | 113.6 | 125.7 |
| N049 | chr15 | 89608949 | 89616404 | TRUE | OK | 129.5 | 0.00875 | 0.01792 | 0.4754 | 0.452 | 0.226 | 125.2 | 67.8 | 136.0 | 168.8 | 119.5 | 159.5 |
| N050 | chr15 | 89616495 | 89618151 | TRUE | OK | 136.9 | 0.00352 | 0.01969 | 0.489 | 0.348 | 0.174 | 138.0 | 79.2 | 143.0 | 157.9 | 130.2 | 173.1 |
| N051 | chr15 | 89618210 | 89619707 | TRUE | OK | 146.5 | 0.00161 | 0.7823 | 0.9451 | 0.032 | 0.016 | 169.6 | 99.1 | 155.1 | 150.9 | 146.9 | 157.6 |
| N052 | chr15 | 89619842 | 89621392 | TRUE | OK | 118.4 | 0.00493 | 0.1073 | 0.705 | 0.253 | 0.127 | 125.2 | 63.6 | 130.9 | 121.1 | 127.3 | 142.1 |
| N053 | chr15 | 89621550 | 89623622 | TRUE | OK | 106.4 | 0.00361 | 6.485e-09 | 1.103e-05 | 0.929 | 0.464 | 92.7 | 44.8 | 88.6 | 140.0 | 140.0 | 132.5 |
| N054 | chr15 | 89625786 | 89625935 | TRUE | OK | 168.7 | 0.00983 | 0.1298 | 0.7232 | 0.324 | 0.162 | 155.8 | 130.3 | 164.2 | 172.7 | 187.0 | 202.1 |
| N055 | chr15 | 89626061 | 89626955 | TRUE | OK | 137.1 | 0.00746 | 0.9498 | 0.9883 | 0.032 | 0.016 | 145.9 | 115.7 | 135.0 | 132.0 | 144.0 | 149.9 |
| N056 | chr15 | 89627182 | 89629429 | TRUE | OK | 11.0 | 0.0186 | 0.9301 | 0.9835 | 0.052 | 0.026 | 6.9 | 11.5 | 13.1 | 9.9 | 11.8 | 12.6 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000166813.15 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |