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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 34915375 | 34915676 | TRUE | OK | 397.9 | 0.0108 | 2.166e-06 | 0.001587 | 0.879 | 0.439 | 421.0 | 366.0 | 440.2 | 378.3 | 365.3 | 416.7 |
E002 | chr5 | 34915676 | 34915709 | TRUE | OK | 54.9 | 0.0123 | 0.1989 | 0.7571 | -0.323 | -0.162 | 71.0 | 65.7 | 91.7 | 37.7 | 33.3 | 30.0 |
E003 | chr5 | 34915709 | 34915715 | TRUE | OK | 64.4 | 0.00773 | 0.1771 | 0.7476 | -0.287 | -0.143 | 84.8 | 80.3 | 100.7 | 44.7 | 38.2 | 37.7 |
E004 | chr5 | 34915715 | 34915751 | TRUE | OK | 294.8 | 0.00208 | 0.3894 | 0.8201 | -0.089 | -0.044 | 382.6 | 424.4 | 356.6 | 220.4 | 178.2 | 206.9 |
E005 | chr5 | 34915751 | 34915897 | TRUE | OK | 904.7 | 0.00322 | 0.2364 | 0.7712 | -0.116 | -0.058 | 1134.9 | 1251.3 | 1188.5 | 705.9 | 546.4 | 601.4 |
E006 | chr5 | 34918363 | 34918475 | TRUE | OK | 1067.0 | 0.00354 | 0.1611 | 0.7396 | -0.143 | -0.071 | 1327.2 | 1484.8 | 1418.2 | 830.0 | 656.1 | 685.5 |
E007 | chr5 | 34919839 | 34919883 | TRUE | OK | 695.9 | 0.00424 | 0.3228 | 0.7987 | -0.112 | -0.056 | 854.9 | 933.2 | 963.9 | 531.1 | 448.5 | 443.8 |
E008 | chr5 | 34919883 | 34921925 | TRUE | OK | 30.8 | 0.00674 | 0.2552 | 0.7776 | 0.296 | 0.148 | 35.5 | 36.5 | 38.3 | 21.8 | 23.5 | 29.0 |
E009 | chr5 | 34922216 | 34922287 | TRUE | OK | 778.9 | 0.00205 | 0.0597 | 0.6475 | -0.167 | -0.083 | 968.3 | 1106.3 | 1035.4 | 570.9 | 509.2 | 483.4 |
E010 | chr5 | 34922287 | 34922538 | TRUE | OK | 36.4 | 0.00615 | 0.465 | 0.8444 | -0.179 | -0.089 | 46.3 | 54.2 | 46.3 | 20.8 | 29.4 | 21.3 |
E011 | chr5 | 34922538 | 34922588 | TRUE | OK | 722.1 | 0.00198 | 0.1723 | 0.7451 | -0.120 | -0.060 | 889.4 | 1010.4 | 959.9 | 523.2 | 484.7 | 465.0 |
E012 | chr5 | 34922588 | 34922694 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.9 | 0.0181 | 0.04951 | NA | NA | NA | 8.9 | 6.3 | 8.1 | 8.9 | 7.8 | 7.7 |
E013 | chr5 | 34922694 | 34922768 | TRUE | OK | 786.1 | 0.00192 | 0.1251 | 0.7202 | -0.133 | -0.066 | 1003.8 | 1095.9 | 1019.3 | 546.0 | 517.1 | 534.7 |
E014 | chr5 | 34922768 | 34923000 | TRUE | OK | 29.5 | 0.0499 | 0.5132 | 0.8602 | 0.304 | 0.152 | 23.7 | 35.5 | 46.3 | 19.9 | 36.2 | 15.5 |
E015 | chr5 | 34923000 | 34923051 | TRUE | OK | 698.3 | 0.0022 | 0.175 | 0.7462 | -0.123 | -0.062 | 905.2 | 974.9 | 887.4 | 492.4 | 435.8 | 494.1 |
E016 | chr5 | 34923051 | 34923132 | TRUE | OK | 17.3 | 0.0226 | 0.6285 | 0.8972 | 0.197 | 0.098 | 23.7 | 17.7 | 22.2 | 12.9 | 18.6 | 8.7 |
E017 | chr5 | 34923132 | 34923234 | TRUE | OK | 848.7 | 0.00352 | 0.1858 | 0.7511 | -0.139 | -0.069 | 1127.0 | 1179.3 | 1062.6 | 618.5 | 509.2 | 595.6 |
E018 | chr5 | 34923234 | 34923357 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.0238 | 0.9652 | NA | NA | NA | 8.9 | 9.4 | 7.1 | 3.0 | 6.9 | 3.9 |
E019 | chr5 | 34924846 | 34924975 | TRUE | OK | 832.5 | 0.00564 | 0.9512 | 0.9887 | 0.013 | 0.006 | 1125.0 | 1132.4 | 954.8 | 648.3 | 536.6 | 597.5 |
E020 | chr5 | 34924975 | 34925225 | TRUE | OK | 12.8 | 0.0418 | 0.4671 | 0.845 | 0.325 | 0.163 | 22.7 | 14.6 | 8.1 | 11.9 | 7.8 | 11.6 |
E021 | chr5 | 34925225 | 34925345 | TRUE | OK | 810.3 | 0.00314 | 0.4599 | 0.8429 | -0.079 | -0.039 | 1047.1 | 1202.3 | 932.7 | 606.6 | 516.1 | 556.9 |
E022 | chr5 | 34925345 | 34925680 | TRUE | OK | 932.3 | 0.00758 | 0.1795 | 0.7486 | -0.226 | -0.113 | 1063.9 | 1588.1 | 1103.9 | 652.3 | 578.8 | 607.2 |
E023 | chr5 | 34925680 | 34925996 | TRUE | OK | 103.3 | 0.0123 | 0.7797 | 0.9444 | 0.048 | 0.024 | 118.3 | 176.2 | 100.7 | 92.3 | 66.6 | 65.7 |
J024 | chr5 | 34915897 | 34918363 | TRUE | OK | 755.0 | 0.00254 | 0.1711 | 0.7445 | -0.126 | -0.063 | 944.6 | 1054.2 | 993.1 | 584.8 | 445.6 | 507.6 |
J025 | chr5 | 34915897 | 34922216 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0465 | 0.03943 | NA | NA | NA | 6.9 | 10.4 | 2.0 | 5.0 | 8.8 | 9.7 |
J026 | chr5 | 34918475 | 34919839 | TRUE | OK | 566.3 | 0.00396 | 0.3942 | 0.822 | -0.095 | -0.048 | 677.4 | 772.7 | 783.6 | 443.8 | 367.2 | 352.9 |
J027 | chr5 | 34919883 | 34922216 | TRUE | OK | 531.2 | 0.00316 | 0.1886 | 0.7528 | -0.139 | -0.070 | 658.7 | 721.6 | 734.3 | 398.1 | 343.7 | 330.7 |
J028 | chr5 | 34922287 | 34922538 | TRUE | OK | 569.1 | 0.00148 | 0.1601 | 0.739 | -0.118 | -0.059 | 695.1 | 797.7 | 762.5 | 410.0 | 381.9 | 367.4 |
J029 | chr5 | 34922588 | 34922694 | TRUE | OK | 562.6 | 0.0012 | 0.0317 | 0.5599 | -0.172 | -0.086 | 711.9 | 802.9 | 739.3 | 382.2 | 374.1 | 365.5 |
J030 | chr5 | 34922768 | 34923000 | TRUE | OK | 548.0 | 0.000927 | 0.02838 | 0.545 | -0.165 | -0.082 | 695.1 | 794.6 | 703.0 | 396.1 | 325.1 | 374.2 |
J031 | chr5 | 34923051 | 34923132 | TRUE | OK | 576.8 | 0.0031 | 0.2649 | 0.7807 | -0.116 | -0.058 | 757.3 | 791.4 | 736.3 | 397.1 | 357.4 | 421.5 |
J032 | chr5 | 34923234 | 34924846 | TRUE | OK | 521.5 | 0.00464 | 0.6955 | 0.9185 | -0.045 | -0.023 | 711.9 | 712.2 | 612.4 | 390.2 | 322.2 | 380.0 |
J033 | chr5 | 34924975 | 34925225 | TRUE | OK | 481.2 | 0.00589 | 0.5866 | 0.8836 | 0.081 | 0.041 | 654.7 | 636.1 | 537.9 | 391.2 | 312.4 | 354.8 |
N034 | chr5 | 34914961 | 34915415 | TRUE | OK | 328.8 | 0.00941 | 5.642e-09 | 9.639e-06 | 1.030 | 0.515 | 329.3 | 292.0 | 340.4 | 327.6 | 315.3 | 368.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000113460.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |