<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000163682.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr4	39452520	39454123	TRUE	OK	167.1	0.0156	0.9847	0.9962	0.027	0.013	178.5	165.8	175.3	158.8	179.2	145.0
E002	chr4	39454123	39454131	TRUE	OK	71.7	0.00633	0.1671	0.7427	-0.282	-0.141	71.0	118.9	56.4	57.6	63.7	62.8
E003	chr4	39454131	39454136	TRUE	OK	262.8	0.00948	0.4796	0.8492	-0.179	-0.090	220.9	446.3	206.5	240.3	229.2	234.0
E004	chr4	39454136	39454138	TRUE	OK	435.8	0.00484	0.07579	0.6719	-0.260	-0.130	370.7	714.3	398.9	373.3	374.1	383.8
E005	chr4	39454138	39454170	TRUE	OK	2623.0	0.00682	0.09916	0.697	-0.274	-0.137	2123.9	4297.0	2489.9	2334.0	2301.3	2191.8
E006	chr4	39454170	39454225	TRUE	OK	5507.5	0.00762	0.01536	0.4513	-0.401	-0.200	4732.8	9237.5	5191.2	4924.2	4468.5	4491.0
E007	chr4	39454532	39454561	TRUE	OK	6874.8	0.0087	0.00523	0.3019	-0.483	-0.242	6075.8	11687.8	6488.5	6115.6	5339.0	5541.9
E008	chr4	39454561	39454623	TRUE	OK	8439.3	0.00937	0.005445	0.3065	-0.497	-0.248	7486.8	14217.5	7952.0	7608.7	6598.4	6772.7
E009	chr4	39454623	39454649	TRUE	OK	8174.8	0.00851	0.00602	0.3202	-0.464	-0.232	7454.2	13541.8	7560.2	7437.0	6268.4	6787.2
E010	chr4	39454863	39454929	TRUE	OK	8847.9	0.00797	0.01486	0.4467	-0.396	-0.198	8211.5	14157.0	8005.4	8237.2	6858.9	7617.7
E011	chr4	39454929	39454944	TRUE	OK	5503.8	0.00598	0.04709	0.6172	-0.275	-0.138	5169.6	8453.3	4939.4	5294.5	4289.2	4876.7
E012	chr4	39454944	39455276	TRUE	OK	565.8	0.015	0.156	0.7372	-0.320	-0.160	432.9	904.0	621.5	502.4	553.3	380.9
E013	chr4	39455810	39456327	TRUE	OK	221.7	0.0198	0.002052	0.1931	-0.746	-0.373	246.5	279.4	334.4	136.0	155.7	177.9
E014	chr4	39456327	39456405	TRUE	OK	202.8	0.00946	0.3961	0.8225	-0.132	-0.066	214.9	259.6	189.4	167.8	162.6	222.4
E015	chr4	39456405	39456538	TRUE	OK	14507.0	0.00445	0.8422	0.9612	0.026	0.013	13272.7	19177.7	12841.1	14655.6	12884.4	14210.6
E016	chr4	39456538	39457125	TRUE	OK	216.3	0.0214	0.1857	0.7511	-0.360	-0.180	159.7	356.6	241.7	192.6	216.4	130.5
E017	chr4	39457354	39457375	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0343	0.6984	NA	NA	NA	3.0	5.2	7.1	3.0	4.9	3.9
E018	chr4	39457375	39457585	TRUE	OK	342.0	0.0079	0.8544	0.9643	0.021	0.010	253.4	473.4	339.4	319.7	376.0	290.1
E019	chr4	39457585	39457596	TRUE	OK	12116.5	0.00408	0.2766	0.7836	0.130	0.065	11098.5	15241.4	10654.4	12397.0	11098.2	12209.2
E020	chr4	39457596	39457681	TRUE	OK	20366.7	0.00581	0.0001706	0.04466	0.509	0.254	17938.5	24295.4	17740.2	20705.6	20617.8	20903.0
E021	chr4	39457804	39457923	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0647	0.9666	NA	NA	NA	8.9	5.2	15.1	7.9	7.8	11.6
E022	chr4	39457923	39458193	TRUE	OK	103.9	0.00552	0.3162	0.7963	-0.157	-0.079	91.7	133.5	117.8	103.3	96.9	80.2
E023	chr4	39458193	39458309	TRUE	OK	18898.8	0.00718	0.0003477	0.07082	0.540	0.269	16604.4	21930.5	16415.7	19224.4	19463.2	19754.4
E024	chr4	39458309	39458393	TRUE	OK	216.7	0.00915	0.9753	0.994	0.023	0.012	212.0	245.0	217.6	214.4	236.0	175.0
E025	chr4	39458393	39458440	TRUE	OK	11648.2	0.00777	0.006987	0.3394	0.430	0.214	10440.8	12710.8	10082.3	12007.8	12033.4	12614.3
E026	chr4	39458440	39458441	TRUE	OK	1350.6	0.00439	0.03979	0.593	-0.216	-0.108	1401.1	1704.8	1419.2	1246.9	1156.5	1174.7
E027	chr4	39458441	39458598	TRUE	OK	1788.0	0.00467	0.01547	0.4519	-0.262	-0.131	1887.2	2280.4	1898.6	1619.2	1507.1	1535.3
E028	chr4	39458598	39458888	TRUE	OK	1180.4	0.00562	4.122e-05	0.01618	-0.510	-0.255	1360.7	1618.3	1316.4	972.9	849.0	964.9
E029	chr4	39458888	39458890	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.437	0.7513	NA	NA	NA	0.0	3.1	2.0	0.0	1.0	7.7
E030	chr4	39458890	39458894	TRUE	OK	4402.0	0.00409	0.0009803	0.1302	0.377	0.189	3766.6	4749.6	3805.3	4600.6	4657.5	4832.2
E031	chr4	39458894	39458897	TRUE	OK	2469.2	0.00535	0.002158	0.1988	0.404	0.202	2090.3	2587.0	2114.2	2524.7	2649.0	2850.2
E032	chr4	39458897	39458901	TRUE	OK	907.3	0.00963	0.06152	0.6501	0.343	0.171	842.1	904.0	786.6	903.4	944.0	1063.5
E033	chr4	39458901	39458915	TRUE	OK	706.9	0.0103	0.08149	0.6791	0.331	0.165	683.3	698.6	598.3	716.8	732.5	812.1
E034	chr4	39458915	39458920	TRUE	OK	211.9	0.00593	0.2719	0.7829	0.188	0.094	208.0	225.2	190.4	218.4	218.4	210.8
E035	chr4	39458920	39458922	TRUE	OK	138.2	0.00524	0.6752	0.912	0.085	0.043	129.2	157.5	135.0	144.0	145.9	118.0
E036	chr4	39458922	39458923	TRUE	OK	117.4	0.00643	0.4682	0.8455	0.147	0.074	114.4	125.1	110.8	125.1	123.4	105.4
E037	chr4	39458923	39458931	TRUE	OK	97.4	0.00423	0.4128	0.828	0.150	0.075	91.7	105.3	93.7	103.3	96.0	94.7
E038	chr4	39458931	39458948	TRUE	OK	32.7	0.00953	0.5254	0.8641	0.189	0.094	31.6	31.3	33.2	34.7	37.2	28.0
E039	chr4	39458948	39458949	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0473	0.496	NA	NA	NA	2.0	5.2	8.1	5.0	8.8	4.8
J040	chr4	39454225	39454532	TRUE	OK	5484.6	0.00763	0.01582	0.4561	-0.400	-0.200	4703.3	9211.4	5166.0	4908.4	4438.1	4480.3
J041	chr4	39454649	39454863	TRUE	OK	7544.6	0.0076	0.005442	0.3065	-0.439	-0.219	6996.7	12336.4	6946.8	6903.9	5732.7	6351.2
J042	chr4	39454929	39456405	TRUE	OK	116.7	0.0156	0.5931	0.8858	-0.121	-0.061	118.3	171.0	91.7	120.1	76.4	122.8
J043	chr4	39454944	39456405	TRUE	OK	4474.8	0.00652	0.1325	0.7246	-0.219	-0.110	4186.6	6787.1	3937.2	4355.4	3462.7	4119.7
J044	chr4	39454944	39457596	TRUE	OK	92.7	0.0066	0.2704	0.7823	0.207	0.104	66.1	113.7	91.7	93.3	81.3	110.2
J045	chr4	39456538	39457585	TRUE	OK	11514.3	0.00366	0.2396	0.7721	0.132	0.066	10545.4	14483.4	10082.3	11767.5	10570.3	11636.8
J046	chr4	39457681	39458193	TRUE	OK	16437.0	0.00513	5.136e-05	0.01927	0.508	0.254	14155.1	19078.6	14108.2	16626.2	17235.3	17418.5
J047	chr4	39458309	39458393	TRUE	OK	11263.6	0.00751	0.003702	0.2571	0.452	0.226	10036.6	12196.7	9672.4	11660.3	11729.8	12285.6
J048	chr4	39458309	39458890	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.218	0.95	NA	NA	NA	0.0	0.0	2.0	1.0	0.0	1.0
J049	chr4	39458440	39458890	TRUE	OK	4333.0	0.00392	0.0006892	0.107	0.381	0.190	3707.4	4661.0	3742.8	4535.1	4583.0	4768.4
J050	chr4	39458441	39458890	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.137	0.1198	NA	NA	NA	7.9	16.7	4.0	6.9	3.9	0.0
J051	chr4	39458598	39458890	TRUE	OK	60.0	0.00304	0.3102	0.7944	0.189	0.095	51.3	70.9	54.4	56.6	69.5	57.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000163682.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE