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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr3 | 138608605 | 138608608 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.9 | 0.0582 | 0.315 | NA | NA | NA | 5.9 | 10.4 | 2.0 | 4.0 | 2.0 | 4.8 |
E002 | chr3 | 138608608 | 138608699 | TRUE | OK | 48.4 | 0.00576 | 0.1479 | 0.7339 | -0.306 | -0.153 | 45.4 | 61.5 | 55.4 | 35.7 | 40.2 | 52.2 |
E003 | chr3 | 138608699 | 138608850 | TRUE | OK | 239.3 | 0.00429 | 0.9607 | 0.9909 | -0.000 | -0.000 | 248.5 | 238.8 | 240.7 | 241.2 | 209.6 | 257.2 |
E004 | chr3 | 138608850 | 138608937 | TRUE | OK | 326.1 | 0.00366 | 0.9302 | 0.9836 | 0.016 | 0.008 | 319.5 | 335.8 | 332.4 | 338.5 | 292.8 | 337.4 |
E005 | chr3 | 138608939 | 138609071 | TRUE | OK | 16.4 | 0.044 | 0.7475 | 0.9346 | -0.148 | -0.074 | 24.7 | 14.6 | 13.1 | 18.9 | 18.6 | 8.7 |
E006 | chr3 | 138609071 | 138609146 | TRUE | OK | 40.2 | 0.00612 | 0.3261 | 0.7998 | 0.227 | 0.113 | 44.4 | 34.4 | 34.2 | 44.7 | 41.1 | 42.5 |
E007 | chr3 | 138610603 | 138611037 | TRUE | OK | 50.3 | 0.00459 | 4.082e-05 | 0.01607 | 0.847 | 0.424 | 42.4 | 36.5 | 32.2 | 59.6 | 63.7 | 67.7 |
E008 | chr3 | 138619710 | 138619770 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.388 | 0.07648 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 3.9 |
E009 | chr3 | 138621209 | 138621224 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.214 | 0.3773 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 0.0 | 1.0 | 0.0 |
E010 | chr3 | 138621224 | 138621264 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.396 | 0.9994 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E011 | chr3 | 138621264 | 138621272 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.235 | 0.261 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 2.9 |
E012 | chr3 | 138621272 | 138621282 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.412 | 0.7316 | NA | NA | NA | 0.0 | 3.1 | 0.0 | 0.0 | 1.0 | 2.9 |
E013 | chr3 | 138621282 | 138621406 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.0553 | 0.9791 | NA | NA | NA | 9.9 | 4.2 | 7.1 | 6.0 | 10.8 | 3.9 |
E014 | chr3 | 138621406 | 138621539 | TRUE | OK | 495.5 | 0.00534 | 0.693 | 0.9176 | 0.061 | 0.030 | 493.0 | 498.4 | 494.5 | 523.2 | 453.4 | 510.5 |
E015 | chr3 | 138622187 | 138622305 | TRUE | OK | 635.9 | 0.00146 | 0.4668 | 0.8449 | 0.066 | 0.033 | 602.5 | 689.2 | 617.4 | 619.5 | 609.1 | 677.8 |
E016 | chr3 | 138622305 | 138622392 | TRUE | OK | 630.0 | 0.00116 | 0.6746 | 0.9118 | 0.035 | 0.018 | 615.3 | 698.6 | 589.2 | 605.6 | 606.2 | 665.2 |
E017 | chr3 | 138622392 | 138622416 | TRUE | OK | 530.4 | 0.00222 | 0.9691 | 0.9926 | -0.005 | -0.003 | 534.4 | 606.9 | 474.4 | 510.3 | 496.5 | 559.8 |
E018 | chr3 | 138629106 | 138629151 | TRUE | OK | 580.4 | 0.00162 | 0.528 | 0.8649 | -0.058 | -0.029 | 593.6 | 656.9 | 536.8 | 550.0 | 543.5 | 601.4 |
E019 | chr3 | 138629151 | 138629156 | TRUE | OK | 456.0 | 0.00212 | 0.4373 | 0.8353 | -0.080 | -0.040 | 471.3 | 529.7 | 413.0 | 424.9 | 427.9 | 468.9 |
E020 | chr3 | 138629156 | 138629332 | TRUE | OK | 17.2 | 0.0104 | 0.06454 | 0.6544 | 0.621 | 0.310 | 17.7 | 13.6 | 10.1 | 19.9 | 18.6 | 23.2 |
E021 | chr3 | 138629332 | 138631139 | TRUE | OK | 35.3 | 0.0293 | 0.202 | 0.7586 | 0.442 | 0.221 | 39.4 | 18.8 | 33.2 | 33.8 | 38.2 | 48.3 |
E022 | chr3 | 138632929 | 138633103 | TRUE | OK | 696.9 | 0.00491 | 0.4686 | 0.8456 | -0.104 | -0.052 | 691.2 | 846.7 | 623.5 | 644.3 | 664.0 | 711.6 |
E023 | chr3 | 138633103 | 138633369 | TRUE | OK | 364.9 | 0.00439 | 0.2125 | 0.7624 | -0.172 | -0.086 | 371.7 | 464.0 | 324.3 | 332.6 | 333.9 | 362.6 |
E024 | chr3 | 138633369 | 138633376 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.119 | 0.7499 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 0.0 | 1.0 | 2.9 |
J025 | chr3 | 138608937 | 138610603 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0722 | 0.3771 | NA | NA | NA | 2.0 | 5.2 | 9.1 | 4.0 | 7.8 | 11.6 |
J026 | chr3 | 138608937 | 138619710 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J027 | chr3 | 138608937 | 138621406 | TRUE | OK | 235.1 | 0.0106 | 0.721 | 0.9264 | -0.055 | -0.027 | 231.7 | 248.2 | 246.8 | 268.1 | 185.1 | 231.1 |
J028 | chr3 | 138609146 | 138621406 | TRUE | OK | 33.6 | 0.00525 | 0.312 | 0.7949 | 0.242 | 0.121 | 37.5 | 29.2 | 27.2 | 36.7 | 38.2 | 32.9 |
J029 | chr3 | 138611037 | 138621406 | TRUE | OK | 18.0 | 0.00788 | 0.1117 | 0.7093 | 0.509 | 0.254 | 16.8 | 13.6 | 15.1 | 25.8 | 16.6 | 20.3 |
J030 | chr3 | 138619770 | 138621406 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.26 | 0.2419 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J031 | chr3 | 138621264 | 138621406 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J032 | chr3 | 138621282 | 138621406 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J033 | chr3 | 138621539 | 138622187 | TRUE | OK | 303.3 | 0.00148 | 0.3119 | 0.7949 | 0.103 | 0.052 | 292.8 | 307.6 | 296.1 | 304.8 | 289.9 | 328.7 |
J034 | chr3 | 138622392 | 138629106 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.2 | 0.0648 | 0.5613 | NA | NA | NA | 4.9 | 8.3 | 11.1 | 8.9 | 7.8 | 1.9 |
J035 | chr3 | 138622416 | 138629106 | TRUE | OK | 503.5 | 0.00159 | 0.7467 | 0.9344 | -0.030 | -0.015 | 511.7 | 575.6 | 455.3 | 474.6 | 471.0 | 532.7 |
J036 | chr3 | 138629156 | 138632929 | TRUE | OK | 434.5 | 0.00184 | 0.6441 | 0.9024 | -0.046 | -0.023 | 447.6 | 501.5 | 387.8 | 405.1 | 410.3 | 454.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000158234.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |