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Normalized Counts Table (ENSG00000120725.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr5	138946723	138946753	TRUE	OK	26.0	0.0214	0.7911	0.9474	0.094	0.047	31.6	31.3	16.1	19.9	22.5	34.8
E002	chr5	138946753	138946994	TRUE	OK	78.4	0.00447	0.01393	0.4373	-0.441	-0.220	82.8	126.2	71.5	60.6	63.7	65.7
E003	chr5	138946994	138947022	TRUE	OK	107.5	0.0158	0.09017	0.6892	-0.461	-0.230	105.5	192.9	87.6	93.3	86.2	79.3
E004	chr5	138947022	138947473	TRUE	OK	1200.9	0.00904	0.5824	0.882	-0.125	-0.062	1056.0	1758.0	1060.6	1153.6	1053.7	1123.5
E005	chr5	138951170	138951335	TRUE	OK	961.3	0.00684	0.1817	0.7496	-0.217	-0.109	942.6	1407.7	831.0	874.6	789.3	922.4
E006	chr5	138951787	138951788	TRUE	OK	553.4	0.00645	0.1562	0.7373	-0.222	-0.111	526.5	818.5	499.6	506.3	429.9	539.5
E007	chr5	138951788	138951819	TRUE	OK	668.5	0.00737	0.3854	0.8188	-0.154	-0.077	640.9	976.0	567.1	613.5	541.5	672.0
E008	chr5	138951819	138951884	TRUE	OK	785.1	0.0066	0.4505	0.8396	-0.128	-0.064	779.9	1112.6	651.7	713.8	660.0	792.8
E009	chr5	138953331	138953433	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.165	0.4683	NA	NA	NA	1.0	1.0	0.0	0.0	1.0	2.9
E010	chr5	139021170	139021292	TRUE	OK	1014.6	0.0032	0.8839	0.972	-0.022	-0.011	1018.5	1307.6	866.2	976.9	902.9	1015.2
E011	chr5	139026800	139026956	TRUE	OK	1380.9	0.0028	0.6084	0.8907	0.058	0.029	1403.1	1593.3	1264.1	1336.3	1288.7	1400.0
E012	chr5	139026956	139026992	TRUE	OK	1162.7	0.00327	0.9583	0.9904	0.016	0.008	1200.0	1327.4	1094.9	1108.9	1073.3	1171.8
E013	chr5	139042619	139042682	TRUE	OK	1222.9	0.00495	0.5779	0.8808	0.083	0.042	1260.1	1334.7	1151.3	1156.6	1173.2	1261.7
E014	chr5	139042682	139042702	TRUE	OK	815.3	0.0166	0.07837	0.6752	0.400	0.200	874.6	714.3	678.9	797.2	872.5	954.3
E015	chr5	139042702	139042719	TRUE	OK	888.6	0.0134	0.09751	0.6965	0.345	0.172	932.8	824.8	761.5	837.9	960.7	1014.2
E016	chr5	139050937	139050945	TRUE	OK	787.6	0.0104	0.1016	0.6994	0.304	0.152	817.4	772.7	664.8	725.7	834.3	910.8
E017	chr5	139050945	139050949	TRUE	OK	776.5	0.00951	0.122	0.7177	0.277	0.138	804.6	783.1	653.7	705.9	818.7	893.4
E018	chr5	139050949	139051006	TRUE	OK	1007.1	0.00868	0.1364	0.7274	0.257	0.129	1031.4	1018.7	886.4	931.2	1031.2	1143.8
E019	chr5	139051006	139051046	TRUE	OK	799.3	0.00565	0.2666	0.7812	0.166	0.083	795.7	843.6	746.4	733.7	777.5	899.2
E020	chr5	139093810	139093881	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.857	0.5793	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
E021	chr5	139108006	139108211	TRUE	OK	21.2	0.0237	0.8465	0.9623	0.077	0.038	25.6	25.0	14.1	14.9	28.4	19.3
E022	chr5	139121034	139121170	TRUE	OK	1366.9	0.00542	0.06232	0.6509	0.258	0.129	1313.4	1446.3	1253.0	1306.5	1327.9	1554.7
E023	chr5	139121170	139121173	TRUE	OK	716.4	0.00539	0.0326	0.564	0.298	0.149	680.3	737.2	634.6	728.7	668.8	848.9
E024	chr5	139127738	139127853	TRUE	OK	972.7	0.00434	0.08293	0.6811	0.220	0.110	910.1	1040.6	914.6	963.0	906.8	1101.2
E025	chr5	139127943	139128052	TRUE	OK	23.7	0.0212	0.1988	0.757	0.465	0.233	19.7	24.0	19.1	37.7	18.6	23.2
E026	chr5	139131566	139131758	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E027	chr5	139133333	139133471	TRUE	OK	19.7	0.0159	0.8221	0.9557	0.076	0.038	16.8	27.1	16.1	26.8	14.7	16.4
E028	chr5	139137328	139137474	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.111	0.6786	NA	NA	NA	1.0	2.1	0.0	1.0	1.0	1.9
E029	chr5	139155319	139155467	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E030	chr5	139187750	139188057	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.0583	0.1282	NA	NA	NA	1.0	1.0	2.0	4.0	2.0	3.9
E031	chr5	139196440	139196521	TRUE	OK	50.7	0.00451	0.711	0.9232	-0.066	-0.033	51.3	58.4	52.4	49.6	41.1	51.2
E032	chr5	139196521	139196528	TRUE	OK	29.9	0.00659	0.8391	0.9604	-0.052	-0.026	31.6	39.6	24.2	29.8	29.4	25.1
E033	chr5	139198268	139198297	TRUE	OK	745.2	0.00284	0.08609	0.6847	0.184	0.092	688.2	818.5	704.0	729.7	699.2	831.5
E034	chr5	139198297	139198304	TRUE	OK	614.9	0.00427	0.3097	0.7942	0.135	0.067	565.0	665.3	618.4	608.6	569.0	663.2
E035	chr5	139198304	139198306	TRUE	OK	567.8	0.00503	0.2635	0.7802	0.159	0.080	524.6	600.6	568.1	562.9	522.9	627.5
E036	chr5	139198306	139198308	TRUE	OK	497.0	0.0032	0.152	0.7355	0.168	0.084	455.5	536.0	485.5	491.4	469.1	544.3
E037	chr5	139198308	139198316	TRUE	OK	453.6	0.00373	0.2834	0.7861	0.137	0.069	414.1	492.2	454.3	445.8	421.1	494.1
E038	chr5	139198316	139198368	TRUE	OK	421.3	0.0036	0.3869	0.8193	0.112	0.056	381.6	465.1	427.1	403.1	392.7	458.3
E039	chr5	139273537	139273654	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.157	0.02583	NA	NA	NA	0.0	0.0	0.0	1.0	2.0	1.9
E040	chr5	139280567	139280685	TRUE	OK	154.6	0.0172	4.172e-05	0.01636	-0.969	-0.484	210.0	190.8	226.6	79.4	106.7	114.1
E041	chr5	139285247	139285310	FALSE	LOW_COUNTS_INDEP_FILTER	3.7	0.0446	0.7852	NA	NA	NA	4.9	5.2	2.0	4.0	1.0	4.8
E042	chr5	139293273	139293422	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.131	0.9661	NA	NA	NA	1.0	1.0	1.0	2.0	1.0	0.0
E043	chr5	139293422	139293534	TRUE	OK	23.6	0.0456	0.6478	0.9037	0.221	0.111	23.7	14.6	30.2	22.8	17.6	32.9
E044	chr5	139293534	139293557	TRUE	OK	18.9	0.0254	0.9811	0.9955	0.028	0.014	21.7	13.6	23.2	17.9	14.7	22.2
J045	chr5	138947473	138951170	TRUE	OK	529.9	0.0045	0.3538	0.8086	-0.132	-0.066	496.9	761.2	465.3	488.5	442.6	525.0
J046	chr5	138951335	138951787	TRUE	OK	547.4	0.00631	0.1601	0.739	-0.219	-0.110	519.6	811.2	492.5	502.4	426.0	532.7
J047	chr5	138951884	138953331	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.541	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J048	chr5	138951884	139021170	TRUE	OK	582.0	0.0056	0.6615	0.9081	-0.080	-0.040	575.8	816.4	471.4	537.1	509.2	582.0
J049	chr5	139021292	139026800	TRUE	OK	616.4	0.00285	0.1728	0.7454	0.145	0.072	624.1	700.7	522.7	623.5	571.9	655.5
J050	chr5	139021292	139042619	TRUE	OK	21.0	0.00956	0.007095	0.3414	-0.825	-0.413	24.7	30.2	28.2	14.9	7.8	20.3
J051	chr5	139026992	139042619	TRUE	OK	1008.9	0.00336	0.6623	0.9083	0.059	0.029	1030.4	1120.9	955.9	951.1	947.0	1048.1
J052	chr5	139042719	139050937	TRUE	OK	742.3	0.0129	0.124	0.7194	0.316	0.158	785.8	700.7	628.5	686.0	793.2	859.5
J053	chr5	139051046	139093810	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.541	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J054	chr5	139051046	139121034	TRUE	OK	725.5	0.00491	0.3343	0.8023	0.139	0.069	713.9	776.8	689.9	658.2	698.2	816.0
J055	chr5	139108211	139121034	TRUE	OK	10.8	0.0362	0.7812	0.9448	0.122	0.061	15.8	11.5	5.0	7.9	13.7	10.6
J056	chr5	139121170	139127738	TRUE	OK	28.7	0.00541	0.7258	0.928	0.093	0.047	28.6	35.5	23.2	20.8	30.4	33.8
J057	chr5	139121173	139127738	TRUE	OK	700.0	0.00518	0.03496	0.5741	0.289	0.145	669.5	725.7	614.4	705.9	651.2	833.4
J058	chr5	139127853	139127943	TRUE	OK	18.1	0.00916	0.1026	0.7005	0.533	0.267	15.8	15.6	15.1	26.8	17.6	17.4
J059	chr5	139127853	139131566	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J060	chr5	139127853	139133333	TRUE	OK	14.0	0.0127	0.8449	0.9618	0.077	0.038	11.8	17.7	13.1	19.9	9.8	11.6
J061	chr5	139127853	139137328	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J062	chr5	139127853	139155319	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr5	139127853	139196440	TRUE	OK	36.0	0.00404	0.6363	0.8999	-0.097	-0.049	37.5	40.7	38.3	30.8	30.4	38.7
J064	chr5	139127853	139198268	TRUE	OK	699.6	0.00247	0.03912	0.5902	0.209	0.105	644.8	761.2	652.7	684.0	664.0	790.9
J065	chr5	139127853	139280567	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J066	chr5	139128052	139196440	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0761	0.8292	NA	NA	NA	4.9	6.3	2.0	7.9	1.0	4.8
J067	chr5	139128052	139198268	FALSE	LOW_COUNTS_INDEP_FILTER	8.0	0.0755	0.8187	NA	NA	NA	5.9	6.3	11.1	12.9	2.9	8.7
J068	chr5	139133471	139198268	TRUE	OK	9.7	0.0121	0.7697	0.9411	-0.123	-0.062	5.9	13.6	12.1	9.9	7.8	8.7
J069	chr5	139137474	139196440	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.555	0.5399	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J070	chr5	139188057	139196440	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.067	0.3292	NA	NA	NA	1.0	0.0	2.0	2.0	1.0	2.9
J071	chr5	139196528	139198268	TRUE	OK	19.0	0.00604	0.44	0.8362	-0.229	-0.115	18.7	25.0	20.1	18.9	16.6	14.5
J072	chr5	139273654	139280567	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.555	0.5399	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J073	chr5	139280685	139285247	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.633	0.3486	NA	NA	NA	0.0	0.0	0.0	2.0	0.0	0.0
J074	chr5	139285310	139293273	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.555	0.5399	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J075	chr5	139285310	139293422	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N076	chr5	139107740	139121034	TRUE	OK	13.2	0.0321	0.8986	0.9758	-0.111	-0.055	9.9	25.0	8.1	11.9	14.7	9.7
N077	chr5	139274161	139274363	TRUE	OK	14.1	0.0369	0.9444	0.9868	-0.022	-0.011	20.7	10.4	13.1	10.9	17.6	11.6
N078	chr5	139274161	139276120	TRUE	OK	167.9	0.032	0.9774	0.9945	0.010	0.005	183.4	136.6	203.5	130.1	156.7	197.2
N079	chr5	139274429	139276120	TRUE	OK	18.2	0.0366	0.7822	0.945	-0.130	-0.065	29.6	14.6	15.1	17.9	14.7	17.4
N080	chr5	139276150	139278326	TRUE	OK	255.7	0.0302	0.8104	0.9526	-0.050	-0.025	278.1	220.0	314.3	194.6	234.0	293.0
N081	chr5	139278408	139279050	TRUE	OK	350.4	0.0303	0.5386	0.8684	-0.174	-0.087	381.6	310.7	462.3	273.0	312.4	362.6
N082	chr5	139279129	139279934	TRUE	OK	121.4	0.0409	0.4701	0.8461	0.247	0.124	137.1	79.2	133.0	139.0	121.4	118.9
N083	chr5	139279129	139282738	TRUE	OK	51.0	0.0177	0.1103	0.7083	-0.412	-0.206	62.1	56.3	62.4	30.8	38.2	56.1
N084	chr5	139279129	139293452	TRUE	OK	12.4	0.155	0.8719	0.9689	-0.111	-0.056	15.8	4.2	20.1	7.9	6.9	19.3
N085	chr5	139279129	139307238	TRUE	OK	47.6	0.0145	0.7132	0.9239	0.110	0.055	54.2	39.6	49.4	51.6	44.1	46.4
N086	chr5	139280058	139282738	TRUE	OK	93.9	0.0189	0.4215	0.8305	0.222	0.111	101.6	76.1	94.7	108.2	94.0	88.9

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000120725.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE