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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr3 | 170864874 | 170865793 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.818 | 0.4529 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E002 | chr3 | 170865793 | 170866262 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.376 | 0.3031 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
E003 | chr3 | 170866262 | 170866263 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.841 | 0.6474 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
E004 | chr3 | 170866263 | 170866266 | TRUE | OK | 326.1 | 0.00348 | 0.1955 | 0.7561 | 0.152 | 0.076 | 292.8 | 435.9 | 286.1 | 303.8 | 286.9 | 351.0 |
E005 | chr3 | 170866266 | 170866267 | TRUE | OK | 375.8 | 0.00376 | 0.2251 | 0.7669 | 0.145 | 0.073 | 342.1 | 497.4 | 332.4 | 350.5 | 326.1 | 406.1 |
E006 | chr3 | 170866267 | 170866524 | TRUE | OK | 7237.7 | 0.00545 | 0.4473 | 0.8387 | -0.100 | -0.050 | 7109.1 | 9879.8 | 6847.1 | 6662.6 | 6218.4 | 6708.9 |
E007 | chr3 | 170868012 | 170868134 | TRUE | OK | 9159.2 | 0.00467 | 0.3385 | 0.8036 | 0.132 | 0.065 | 8817.9 | 12079.9 | 8809.2 | 8655.1 | 8223.0 | 8369.9 |
E008 | chr3 | 170868134 | 170868181 | TRUE | OK | 373.1 | 0.0042 | 0.6639 | 0.9088 | -0.056 | -0.028 | 341.2 | 528.7 | 368.6 | 320.7 | 376.0 | 303.6 |
E009 | chr3 | 170868181 | 170868201 | TRUE | OK | 268.8 | 0.00553 | 0.4045 | 0.8254 | 0.112 | 0.056 | 217.9 | 370.2 | 258.9 | 228.3 | 282.0 | 255.2 |
E010 | chr3 | 170868297 | 170868387 | TRUE | OK | 5735.6 | 0.00199 | 0.1821 | 0.7499 | 0.117 | 0.058 | 5507.8 | 7309.5 | 5572.0 | 5510.0 | 5195.1 | 5319.5 |
E011 | chr3 | 170868387 | 170868390 | TRUE | OK | 2909.8 | 0.00278 | 0.01507 | 0.4488 | 0.237 | 0.118 | 2797.3 | 3454.5 | 2722.5 | 2831.4 | 2795.8 | 2857.0 |
E012 | chr3 | 170869964 | 170870033 | TRUE | OK | 33.4 | 0.0074 | 9.743e-10 | 2.106e-06 | -1.659 | -0.830 | 43.4 | 58.4 | 56.4 | 14.9 | 12.7 | 14.5 |
E013 | chr3 | 170870158 | 170870195 | TRUE | OK | 3053.4 | 0.0027 | 0.01373 | 0.4351 | 0.237 | 0.118 | 2892.9 | 3620.3 | 2912.9 | 3007.2 | 2889.9 | 2997.2 |
E014 | chr3 | 170870195 | 170870208 | TRUE | OK | 18.3 | 0.00902 | 0.5866 | 0.8836 | -0.164 | -0.082 | 20.7 | 22.9 | 19.1 | 14.9 | 17.6 | 14.5 |
J015 | chr3 | 170866524 | 170868012 | TRUE | OK | 5585.6 | 0.00371 | 0.7279 | 0.9288 | -0.037 | -0.018 | 5499.0 | 7557.6 | 5258.7 | 5180.4 | 4763.2 | 5254.8 |
J016 | chr3 | 170868134 | 170868297 | TRUE | OK | 5437.4 | 0.00213 | 0.238 | 0.7715 | 0.109 | 0.054 | 5258.4 | 6904.9 | 5273.8 | 5251.9 | 4884.6 | 5050.8 |
J017 | chr3 | 170868201 | 170868297 | TRUE | OK | 244.8 | 0.0033 | 0.1878 | 0.7523 | 0.159 | 0.079 | 200.2 | 325.3 | 234.7 | 215.4 | 256.6 | 236.9 |
J018 | chr3 | 170868387 | 170870158 | TRUE | OK | 384.8 | 0.00482 | 0.5776 | 0.8806 | 0.084 | 0.042 | 339.2 | 467.1 | 417.0 | 393.1 | 322.2 | 370.3 |
J019 | chr3 | 170868390 | 170869964 | TRUE | OK | 11.5 | 0.0119 | 7.297e-06 | 0.004263 | -2.020 | -1.010 | 17.7 | 26.1 | 13.1 | 6.9 | 2.0 | 2.9 |
J020 | chr3 | 170868390 | 170870158 | TRUE | OK | 2664.4 | 0.00233 | 0.006156 | 0.3231 | 0.246 | 0.123 | 2547.8 | 3146.9 | 2488.8 | 2613.0 | 2565.7 | 2624.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000163584.18 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |