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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr10 | 14897358 | 14899312 | TRUE | OK | 370.5 | 0.00581 | 0.004792 | 0.2901 | -0.405 | -0.202 | 416.1 | 372.3 | 409.9 | 393.1 | 304.6 | 326.8 |
E002 | chr10 | 14904612 | 14907878 | TRUE | OK | 562.5 | 0.00671 | 0.5352 | 0.8672 | 0.093 | 0.047 | 521.6 | 580.8 | 495.6 | 555.0 | 594.4 | 627.5 |
E003 | chr10 | 14907878 | 14908165 | TRUE | OK | 101.5 | 0.011 | 0.2762 | 0.7836 | -0.239 | -0.119 | 94.7 | 132.4 | 91.7 | 102.3 | 92.1 | 95.7 |
E004 | chr10 | 14908165 | 14908170 | TRUE | OK | 41.1 | 0.0196 | 0.6491 | 0.9041 | -0.130 | -0.065 | 30.6 | 46.9 | 47.3 | 48.6 | 28.4 | 44.5 |
E005 | chr10 | 14908170 | 14908187 | TRUE | OK | 41.6 | 0.0175 | 0.4977 | 0.8549 | -0.189 | -0.095 | 32.5 | 48.0 | 48.3 | 48.6 | 28.4 | 43.5 |
E006 | chr10 | 14908187 | 14908741 | TRUE | OK | 231.3 | 0.005 | 0.9982 | 0.9995 | -0.003 | -0.001 | 204.1 | 213.8 | 254.8 | 247.2 | 242.9 | 225.3 |
E007 | chr10 | 14908741 | 14909169 | TRUE | OK | 207.3 | 0.00212 | 0.8776 | 0.9704 | 0.018 | 0.009 | 203.1 | 206.5 | 189.4 | 217.4 | 216.4 | 210.8 |
E008 | chr10 | 14909169 | 14909330 | TRUE | OK | 110.5 | 0.00667 | 0.9647 | 0.9918 | -0.011 | -0.005 | 124.2 | 95.9 | 101.7 | 107.2 | 129.3 | 104.4 |
E009 | chr10 | 14911189 | 14911322 | TRUE | OK | 29.7 | 0.00623 | 0.07557 | 0.6716 | -0.452 | -0.226 | 35.5 | 31.3 | 33.2 | 23.8 | 23.5 | 30.9 |
E010 | chr10 | 14919737 | 14919795 | TRUE | OK | 77.0 | 0.015 | 0.2556 | 0.7776 | 0.265 | 0.132 | 85.8 | 48.0 | 69.5 | 77.4 | 97.9 | 83.1 |
E011 | chr10 | 14919795 | 14919832 | TRUE | OK | 70.4 | 0.0128 | 0.6688 | 0.91 | 0.087 | 0.043 | 83.8 | 46.9 | 67.5 | 66.5 | 76.4 | 81.2 |
E012 | chr10 | 14920379 | 14920444 | TRUE | OK | 10.9 | 0.0187 | 0.3499 | 0.8074 | 0.396 | 0.198 | 11.8 | 10.4 | 5.0 | 9.9 | 15.7 | 12.6 |
E013 | chr10 | 14922980 | 14923069 | TRUE | OK | 76.1 | 0.0141 | 0.1095 | 0.7074 | 0.369 | 0.185 | 79.9 | 42.8 | 70.5 | 80.4 | 92.1 | 90.9 |
E014 | chr10 | 14923069 | 14923675 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0394 | 0.959 | NA | NA | NA | 3.9 | 5.2 | 3.0 | 2.0 | 3.9 | 6.8 |
E015 | chr10 | 14926842 | 14926897 | TRUE | OK | 59.5 | 0.0133 | 0.08011 | 0.6774 | 0.422 | 0.211 | 61.1 | 32.3 | 54.4 | 64.5 | 65.6 | 79.3 |
E016 | chr10 | 14928015 | 14928062 | TRUE | OK | 58.3 | 0.0203 | 0.2003 | 0.7581 | 0.332 | 0.166 | 72.0 | 34.4 | 43.3 | 68.5 | 62.7 | 68.6 |
E017 | chr10 | 14928062 | 14928082 | TRUE | OK | 48.1 | 0.0291 | 0.1449 | 0.7324 | 0.442 | 0.221 | 57.2 | 21.9 | 39.3 | 61.6 | 49.9 | 59.0 |
E018 | chr10 | 14928082 | 14928142 | TRUE | OK | 60.7 | 0.0615 | 0.2968 | 0.7908 | 0.427 | 0.213 | 71.0 | 28.2 | 51.4 | 88.4 | 49.9 | 75.4 |
E019 | chr10 | 14928142 | 14928152 | TRUE | OK | 53.1 | 0.0463 | 0.1935 | 0.7555 | 0.485 | 0.243 | 58.2 | 24.0 | 46.3 | 73.5 | 46.0 | 70.6 |
E020 | chr10 | 14932853 | 14932955 | TRUE | OK | 63.5 | 0.0436 | 0.172 | 0.745 | 0.520 | 0.260 | 64.1 | 32.3 | 55.4 | 89.4 | 50.9 | 88.9 |
E021 | chr10 | 14934379 | 14934444 | TRUE | OK | 69.1 | 0.0106 | 0.002818 | 0.227 | 0.675 | 0.337 | 63.1 | 39.6 | 52.4 | 98.3 | 69.5 | 91.8 |
E022 | chr10 | 14934444 | 14934520 | TRUE | OK | 73.3 | 0.00589 | 0.002735 | 0.2238 | 0.576 | 0.288 | 64.1 | 49.0 | 58.4 | 92.3 | 73.4 | 102.5 |
E023 | chr10 | 14934702 | 14934722 | TRUE | OK | 57.1 | 0.0079 | 0.003105 | 0.2377 | 0.653 | 0.326 | 50.3 | 40.7 | 38.3 | 72.5 | 56.8 | 84.1 |
E024 | chr10 | 14934722 | 14934775 | TRUE | OK | 59.5 | 0.00497 | 0.00395 | 0.2651 | 0.569 | 0.284 | 50.3 | 41.7 | 47.3 | 76.4 | 59.7 | 81.2 |
E025 | chr10 | 14935462 | 14935523 | TRUE | OK | 69.8 | 0.00417 | 0.001201 | 0.1462 | 0.589 | 0.294 | 57.2 | 51.1 | 54.4 | 76.4 | 82.3 | 97.7 |
E026 | chr10 | 14935523 | 14935564 | TRUE | OK | 69.2 | 0.00411 | 0.00525 | 0.3024 | 0.505 | 0.253 | 61.1 | 54.2 | 51.4 | 73.5 | 86.2 | 88.9 |
E027 | chr10 | 14936537 | 14936593 | TRUE | OK | 63.6 | 0.0051 | 0.05394 | 0.6348 | 0.369 | 0.185 | 61.1 | 43.8 | 56.4 | 64.5 | 78.3 | 77.3 |
E028 | chr10 | 14939809 | 14939869 | TRUE | OK | 82.1 | 0.00992 | 0.2345 | 0.7706 | 0.244 | 0.122 | 80.9 | 53.2 | 84.6 | 81.4 | 98.9 | 93.8 |
E029 | chr10 | 14942113 | 14942240 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.0 | 0.0209 | 0.3869 | NA | NA | NA | 4.9 | 10.4 | 7.1 | 13.9 | 8.8 | 8.7 |
E030 | chr10 | 14942240 | 14942435 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0309 | 0.7122 | NA | NA | NA | 3.9 | 9.4 | 6.0 | 5.0 | 10.8 | 7.7 |
E031 | chr10 | 14945104 | 14945189 | TRUE | OK | 99.2 | 0.0137 | 0.6495 | 0.9043 | 0.084 | 0.042 | 106.5 | 63.6 | 109.8 | 104.2 | 108.7 | 102.5 |
E032 | chr10 | 14945434 | 14945565 | TRUE | OK | 10.7 | 0.0181 | 0.3923 | 0.8213 | 0.359 | 0.179 | 8.9 | 5.2 | 13.1 | 9.9 | 14.7 | 12.6 |
E033 | chr10 | 14947524 | 14947609 | TRUE | OK | 34.6 | 0.00582 | 0.2575 | 0.7782 | 0.271 | 0.136 | 31.6 | 30.2 | 29.2 | 33.8 | 43.1 | 39.6 |
E034 | chr10 | 14949035 | 14949087 | TRUE | OK | 87.1 | 0.00884 | 0.2775 | 0.784 | 0.212 | 0.106 | 90.7 | 56.3 | 87.6 | 99.3 | 86.2 | 102.5 |
E035 | chr10 | 14953901 | 14954018 | TRUE | OK | 83.6 | 0.00858 | 0.3244 | 0.7993 | 0.195 | 0.098 | 86.8 | 56.3 | 83.6 | 92.3 | 79.3 | 103.5 |
E036 | chr10 | 14954018 | 14954019 | TRUE | OK | 42.5 | 0.00761 | 0.5897 | 0.8846 | 0.126 | 0.063 | 46.3 | 31.3 | 40.3 | 43.7 | 38.2 | 55.1 |
E037 | chr10 | 14954019 | 14954031 | TRUE | OK | 41.7 | 0.00822 | 0.6224 | 0.8953 | 0.119 | 0.060 | 44.4 | 31.3 | 40.3 | 42.7 | 36.2 | 55.1 |
E038 | chr10 | 14954031 | 14954048 | TRUE | OK | 33.4 | 0.012 | 0.4267 | 0.8319 | 0.214 | 0.107 | 38.5 | 20.9 | 30.2 | 39.7 | 29.4 | 41.6 |
E039 | chr10 | 14954048 | 14954058 | TRUE | OK | 21.1 | 0.0115 | 0.2327 | 0.7701 | 0.370 | 0.185 | 22.7 | 10.4 | 20.1 | 25.8 | 20.6 | 27.1 |
E040 | chr10 | 14954058 | 14954072 | TRUE | OK | 19.5 | 0.0112 | 0.2537 | 0.7768 | 0.362 | 0.181 | 19.7 | 9.4 | 20.1 | 21.8 | 20.6 | 25.1 |
E041 | chr10 | 14954072 | 14954095 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0186 | 0.6789 | NA | NA | NA | 8.9 | 6.3 | 11.1 | 6.0 | 8.8 | 9.7 |
E042 | chr10 | 14954095 | 14954096 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.114 | 0.6257 | NA | NA | NA | 2.0 | 2.1 | 3.0 | 0.0 | 4.9 | 5.8 |
E043 | chr10 | 14954096 | 14954432 | TRUE | OK | 14.4 | 0.0105 | 0.3994 | 0.8239 | 0.300 | 0.150 | 11.8 | 11.5 | 14.1 | 14.9 | 17.6 | 16.4 |
J044 | chr10 | 14899312 | 14919737 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J045 | chr10 | 14909330 | 14911189 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.382 | 0.2368 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 4.8 |
J046 | chr10 | 14909330 | 14919737 | TRUE | OK | 52.8 | 0.021 | 0.3778 | 0.816 | 0.237 | 0.119 | 63.1 | 31.3 | 46.3 | 53.6 | 69.5 | 53.2 |
J047 | chr10 | 14919832 | 14920379 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0323 | 0.6804 | NA | NA | NA | 10.8 | 5.2 | 3.0 | 6.9 | 9.8 | 6.8 |
J048 | chr10 | 14919832 | 14922980 | TRUE | OK | 51.0 | 0.0221 | 0.4021 | 0.8247 | 0.221 | 0.110 | 57.2 | 26.1 | 53.4 | 51.6 | 55.8 | 61.9 |
J049 | chr10 | 14920444 | 14922980 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.127 | 0.2009 | NA | NA | NA | 3.9 | 3.1 | 0.0 | 4.0 | 9.8 | 2.9 |
J050 | chr10 | 14923069 | 14926842 | TRUE | OK | 53.0 | 0.0113 | 0.1313 | 0.724 | 0.357 | 0.178 | 55.2 | 30.2 | 49.4 | 53.6 | 60.7 | 68.6 |
J051 | chr10 | 14923069 | 14928015 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0397 | 0.5381 | NA | NA | NA | 2.0 | 2.1 | 1.0 | 2.0 | 2.9 | 2.9 |
J052 | chr10 | 14926897 | 14928015 | TRUE | OK | 40.3 | 0.00978 | 0.1239 | 0.7193 | 0.375 | 0.188 | 46.3 | 24.0 | 31.2 | 45.7 | 45.0 | 49.3 |
J053 | chr10 | 14928152 | 14932853 | TRUE | OK | 49.3 | 0.0474 | 0.2151 | 0.7632 | 0.481 | 0.240 | 52.3 | 22.9 | 44.3 | 70.5 | 41.1 | 64.8 |
J054 | chr10 | 14932955 | 14934379 | TRUE | OK | 41.4 | 0.0155 | 0.02837 | 0.545 | 0.620 | 0.310 | 39.4 | 24.0 | 31.2 | 62.5 | 37.2 | 54.1 |
J055 | chr10 | 14934520 | 14934702 | TRUE | OK | 50.0 | 0.00831 | 0.00835 | 0.3664 | 0.610 | 0.305 | 45.4 | 35.5 | 34.2 | 62.5 | 48.0 | 74.4 |
J056 | chr10 | 14934775 | 14935462 | TRUE | OK | 42.1 | 0.00413 | 0.009861 | 0.3899 | 0.556 | 0.278 | 33.5 | 32.3 | 33.2 | 51.6 | 42.1 | 59.9 |
J057 | chr10 | 14935523 | 14936537 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.6008 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J058 | chr10 | 14935564 | 14936537 | TRUE | OK | 48.8 | 0.00412 | 0.03876 | 0.5888 | 0.419 | 0.210 | 45.4 | 39.6 | 36.3 | 48.6 | 63.7 | 59.0 |
J059 | chr10 | 14935564 | 14939809 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.0208 | 0.006149 | NA | NA | NA | 9.9 | 7.3 | 6.0 | 4.0 | 2.9 | 1.0 |
J060 | chr10 | 14936593 | 14939809 | TRUE | OK | 50.4 | 0.00599 | 0.05945 | 0.6468 | 0.401 | 0.201 | 47.3 | 34.4 | 44.3 | 47.7 | 65.6 | 62.8 |
J061 | chr10 | 14939869 | 14942113 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0499 | 0.3021 | NA | NA | NA | 3.9 | 6.3 | 2.0 | 10.9 | 5.9 | 3.9 |
J062 | chr10 | 14939869 | 14945104 | TRUE | OK | 61.2 | 0.0112 | 0.7683 | 0.9407 | 0.055 | 0.027 | 63.1 | 39.6 | 71.5 | 61.6 | 67.6 | 63.8 |
J063 | chr10 | 14939869 | 14949035 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.6036 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J064 | chr10 | 14942240 | 14945104 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0768 | 0.9119 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 2.0 | 3.9 | 0.0 |
J065 | chr10 | 14942435 | 14945104 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.101 | 0.3777 | NA | NA | NA | 3.0 | 4.2 | 0.0 | 2.0 | 6.9 | 3.9 |
J066 | chr10 | 14945189 | 14945434 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.0234 | 0.418 | NA | NA | NA | 3.9 | 2.1 | 5.0 | 4.0 | 7.8 | 4.8 |
J067 | chr10 | 14945189 | 14947524 | TRUE | OK | 20.8 | 0.0176 | 0.3223 | 0.7987 | 0.331 | 0.165 | 19.7 | 10.4 | 23.2 | 19.9 | 29.4 | 22.2 |
J068 | chr10 | 14945189 | 14949035 | TRUE | OK | 39.0 | 0.0235 | 0.7759 | 0.9431 | 0.065 | 0.033 | 45.4 | 20.9 | 44.3 | 47.7 | 35.3 | 40.6 |
J069 | chr10 | 14945189 | 14953901 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.0277 | 0.2603 | NA | NA | NA | 4.9 | 5.2 | 5.0 | 3.0 | 5.9 | 1.0 |
J070 | chr10 | 14945565 | 14949035 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0344 | 0.2033 | NA | NA | NA | 4.9 | 0.0 | 5.0 | 6.0 | 7.8 | 4.8 |
J071 | chr10 | 14947609 | 14949035 | TRUE | OK | 22.0 | 0.00633 | 0.1954 | 0.756 | 0.371 | 0.186 | 19.7 | 21.9 | 14.1 | 21.8 | 27.4 | 27.1 |
J072 | chr10 | 14949087 | 14953901 | TRUE | OK | 70.2 | 0.0102 | 0.2478 | 0.775 | 0.251 | 0.126 | 71.0 | 44.8 | 70.5 | 86.4 | 63.7 | 85.1 |
N073 | chr10 | 14896977 | 14899538 | TRUE | OK | 15.5 | 0.00753 | 0.04424 | 0.6078 | -0.676 | -0.338 | 15.8 | 17.7 | 22.2 | 13.9 | 11.8 | 11.6 |
N074 | chr10 | 14897517 | 14899538 | TRUE | OK | 181.0 | 0.0083 | 0.001202 | 0.1462 | -0.578 | -0.289 | 232.7 | 176.2 | 213.5 | 182.7 | 134.2 | 147.0 |
N075 | chr10 | 14899685 | 14901132 | TRUE | OK | 222.9 | 0.00287 | 1.04e-09 | 2.236e-06 | -0.752 | -0.376 | 276.1 | 272.1 | 249.8 | 184.7 | 155.7 | 199.2 |
N076 | chr10 | 14901262 | 14902405 | TRUE | OK | 191.1 | 0.00641 | 0.001458 | 0.1624 | -0.510 | -0.255 | 207.1 | 237.7 | 200.4 | 180.7 | 140.0 | 180.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000152457.18 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |