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Normalized Counts Table (ENSG00000163328.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	174431570	174432237	TRUE	OK	11.6	0.014	0.6279	0.8971	-0.193	-0.096	10.8	12.5	11.1	13.9	11.8	9.7
E002	chr2	174432237	174434151	TRUE	OK	173.0	0.0182	0.2645	0.7807	-0.257	-0.128	160.7	196.0	158.1	141.0	179.2	203.0
E003	chr2	174434151	174435143	TRUE	OK	107.0	0.0455	0.693	0.9176	-0.182	-0.091	85.8	148.1	79.6	124.1	96.9	107.3
E004	chr2	174435143	174436305	TRUE	OK	181.1	0.00228	0.7654	0.9398	0.039	0.019	178.5	158.5	158.1	193.6	191.9	205.9
E005	chr2	174436305	174436416	TRUE	OK	59.5	0.0268	0.6308	0.898	0.130	0.065	61.1	32.3	63.5	82.4	59.7	58.0
E006	chr2	174439897	174440035	TRUE	OK	60.1	0.0262	0.5437	0.8699	0.205	0.102	61.1	41.7	51.4	91.3	65.6	49.3
E007	chr2	174442118	174442183	TRUE	OK	42.5	0.00539	0.3007	0.7917	0.228	0.114	42.4	31.3	34.2	50.6	52.9	43.5
E008	chr2	174445080	174445176	TRUE	OK	45.7	0.0053	0.3107	0.7946	0.213	0.107	51.3	31.3	34.2	48.6	51.9	57.0
E009	chr2	174445259	174445422	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.854	0.5301	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E010	chr2	174446610	174446747	TRUE	OK	56.4	0.0168	0.3765	0.8155	0.206	0.103	70.0	32.3	42.3	64.5	72.5	57.0
E011	chr2	174453736	174453841	TRUE	OK	46.7	0.0191	0.4751	0.8479	0.163	0.081	62.1	28.2	31.2	55.6	51.9	51.2
E012	chr2	174459877	174460088	TRUE	OK	63.4	0.00548	0.8284	0.9573	0.034	0.017	73.0	40.7	59.4	63.5	69.5	74.4
E013	chr2	174461401	174461492	TRUE	OK	38.9	0.00679	0.6258	0.8964	-0.118	-0.059	40.4	29.2	42.3	40.7	34.3	46.4
E014	chr2	174461587	174461672	TRUE	OK	34.2	0.0277	0.2935	0.7896	-0.371	-0.186	30.6	28.2	48.3	38.7	24.5	34.8
E015	chr2	174465784	174465902	TRUE	OK	37.6	0.0495	0.6046	0.8895	-0.188	-0.094	41.4	25.0	44.3	46.7	19.6	48.3
E016	chr2	174466543	174466627	TRUE	OK	35.4	0.0263	0.4898	0.8526	-0.252	-0.126	50.3	25.0	31.2	40.7	23.5	41.6
E017	chr2	174468911	174469067	TRUE	OK	56.2	0.0318	0.4095	0.827	0.235	0.118	74.0	31.3	37.3	56.6	53.9	84.1
E018	chr2	174470389	174470555	TRUE	OK	56.8	0.0434	0.613	0.8922	0.104	0.052	80.9	25.0	45.3	55.6	55.8	78.3
E019	chr2	174472964	174473364	TRUE	OK	90.4	0.0127	0.9271	0.9828	-0.046	-0.023	107.5	54.2	91.7	88.4	96.9	103.5
E020	chr2	174481496	174481987	TRUE	OK	111.3	0.0388	0.3898	0.8202	0.238	0.119	125.2	49.0	109.8	113.2	152.8	118.0
E021	chr2	174482872	174482918	FALSE	LOW_COUNTS_INDEP_FILTER	8.1	0.131	0.4871	NA	NA	NA	14.8	1.0	4.0	10.9	10.8	6.8
E022	chr2	174483009	174483158	TRUE	OK	51.4	0.017	0.02441	0.5216	0.605	0.302	48.3	20.9	43.3	58.6	75.4	61.9
E023	chr2	174486872	174487000	TRUE	OK	36.1	0.0239	0.003153	0.2398	1.013	0.507	18.7	18.8	28.2	36.7	66.6	47.4
E024	chr2	174487000	174487037	TRUE	OK	16.6	0.0187	0.03809	0.5867	0.786	0.393	8.9	7.3	17.1	17.9	25.5	23.2
E025	chr2	174487037	174487080	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0341	0.6357	NA	NA	NA	5.9	3.1	8.1	4.0	3.9	8.7
E026	chr2	174487080	174487088	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.177	0.2706	NA	NA	NA	1.0	1.0	1.0	0.0	0.0	1.0
E027	chr2	174487088	174487094	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.842	0.5226	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J028	chr2	174436416	174439897	TRUE	OK	39.2	0.0476	0.6603	0.9076	0.199	0.099	37.5	21.9	41.3	63.5	42.1	29.0
J029	chr2	174440035	174442118	TRUE	OK	29.8	0.00507	0.7243	0.9275	0.086	0.043	30.6	26.1	23.2	37.7	30.4	30.9
J030	chr2	174442183	174445080	TRUE	OK	31.4	0.00453	0.1051	0.7025	0.392	0.196	31.6	20.9	22.2	38.7	40.2	34.8
J031	chr2	174445176	174445259	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J032	chr2	174445176	174446610	TRUE	OK	32.4	0.00441	0.6997	0.9198	0.087	0.043	37.5	21.9	27.2	32.8	38.2	36.7
J033	chr2	174446747	174453736	TRUE	OK	31.0	0.0341	0.4217	0.8305	0.240	0.120	42.4	14.6	21.2	38.7	40.2	29.0
J034	chr2	174453841	174459877	TRUE	OK	31.3	0.0135	0.2713	0.7826	0.295	0.147	39.4	17.7	20.1	36.7	33.3	40.6
J035	chr2	174460088	174461401	TRUE	OK	33.1	0.00418	0.7686	0.9408	-0.072	-0.036	37.5	24.0	32.2	31.8	34.3	38.7
J036	chr2	174461492	174461587	TRUE	OK	25.4	0.021	0.3873	0.8194	-0.301	-0.150	20.7	20.9	36.3	24.8	21.5	28.0
J037	chr2	174461672	174465784	TRUE	OK	17.3	0.094	0.4524	0.8402	-0.445	-0.223	14.8	11.5	29.2	22.8	6.9	18.4
J038	chr2	174465902	174466543	TRUE	OK	25.3	0.0291	0.9354	0.9847	-0.025	-0.012	30.6	16.7	23.2	30.8	15.7	34.8
J039	chr2	174465902	174468911	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J040	chr2	174466627	174468911	TRUE	OK	25.6	0.0225	0.7404	0.9328	-0.143	-0.072	37.5	18.8	18.1	29.8	19.6	30.0
J041	chr2	174469067	174470389	TRUE	OK	35.0	0.0523	0.2024	0.7588	0.487	0.244	45.4	13.6	21.2	32.8	38.2	59.0
J042	chr2	174470555	174472964	TRUE	OK	30.5	0.04	0.7499	0.9352	0.065	0.032	42.4	12.5	27.2	29.8	28.4	42.5
J043	chr2	174473364	174481496	TRUE	OK	29.0	0.00544	0.9593	0.9905	0.010	0.005	28.6	19.8	31.2	31.8	34.3	28.0
J044	chr2	174481987	174482872	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0257	0.5043	NA	NA	NA	5.9	1.0	3.0	6.0	5.9	3.9
J045	chr2	174481987	174483009	TRUE	OK	24.6	0.0239	0.3926	0.8215	0.269	0.134	28.6	9.4	23.2	30.8	31.3	24.2
J046	chr2	174481987	174486872	FALSE	LOW_COUNTS_INDEP_FILTER	7.1	0.175	0.4927	NA	NA	NA	3.0	2.1	10.1	5.0	17.6	4.8
J047	chr2	174482918	174483009	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.0844	0.5765	NA	NA	NA	1.0	0.0	1.0	1.0	2.0	1.0
J048	chr2	174482918	174486872	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.617	0.4285	NA	NA	NA	0.0	0.0	0.0	0.0	2.0	0.0
J049	chr2	174483158	174486872	TRUE	OK	24.7	0.00873	3.144e-05	0.01324	1.271	0.635	10.8	12.5	16.1	26.8	42.1	39.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000163328.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE