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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr4 | 156760453 | 156761613 | TRUE | OK | 14.0 | 0.0115 | 0.04463 | 0.6091 | 0.733 | 0.367 | 13.8 | 11.5 | 8.1 | 18.9 | 15.7 | 16.4 |
E002 | chr4 | 156761613 | 156762802 | TRUE | OK | 1291.1 | 0.0117 | 0.06329 | 0.6527 | -0.356 | -0.177 | 1302.5 | 1708.0 | 1287.2 | 1180.4 | 1090.9 | 1177.6 |
E003 | chr4 | 156762802 | 156762947 | TRUE | OK | 525.2 | 0.0023 | 0.7124 | 0.9237 | -0.035 | -0.017 | 579.8 | 549.5 | 526.8 | 524.2 | 465.2 | 505.7 |
E004 | chr4 | 156762947 | 156763089 | TRUE | OK | 408.4 | 0.00353 | 0.7444 | 0.9338 | 0.040 | 0.020 | 442.7 | 439.0 | 379.7 | 418.0 | 349.6 | 421.5 |
E005 | chr4 | 156763089 | 156763206 | TRUE | OK | 424.3 | 0.00368 | 0.5248 | 0.8638 | 0.079 | 0.040 | 453.6 | 414.0 | 428.1 | 456.7 | 372.1 | 421.5 |
E006 | chr4 | 156767772 | 156767781 | TRUE | OK | 266.9 | 0.0052 | 0.4368 | 0.8351 | 0.110 | 0.055 | 278.1 | 239.8 | 288.1 | 261.1 | 259.5 | 274.6 |
E007 | chr4 | 156767781 | 156767876 | TRUE | OK | 338.9 | 0.00715 | 0.4507 | 0.8396 | 0.116 | 0.058 | 364.8 | 300.3 | 357.6 | 331.6 | 345.7 | 333.6 |
E008 | chr4 | 156767876 | 156767961 | TRUE | OK | 322.2 | 0.00841 | 0.6803 | 0.9137 | 0.067 | 0.034 | 339.2 | 286.7 | 360.6 | 295.9 | 314.3 | 336.5 |
E009 | chr4 | 156767961 | 156767990 | TRUE | OK | 273.5 | 0.00575 | 0.4915 | 0.8531 | 0.102 | 0.051 | 285.0 | 245.0 | 298.1 | 272.0 | 250.7 | 290.1 |
E010 | chr4 | 156770181 | 156770643 | TRUE | OK | 13.7 | 0.0369 | 0.1531 | 0.7358 | -0.650 | -0.325 | 12.8 | 16.7 | 22.2 | 5.0 | 14.7 | 10.6 |
E011 | chr4 | 156772685 | 156772788 | TRUE | OK | 345.9 | 0.00385 | 0.8468 | 0.9623 | -0.021 | -0.011 | 363.8 | 338.9 | 384.8 | 338.5 | 298.7 | 351.0 |
E012 | chr4 | 156772788 | 156772893 | TRUE | OK | 372.5 | 0.00468 | 0.273 | 0.783 | 0.149 | 0.074 | 381.6 | 346.2 | 385.8 | 388.2 | 328.1 | 405.1 |
E013 | chr4 | 156773676 | 156773717 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.04 | 0.5706 | NA | NA | NA | 6.9 | 7.3 | 16.1 | 8.9 | 4.9 | 8.7 |
E014 | chr4 | 156774371 | 156774478 | TRUE | OK | 69.8 | 0.00716 | 0.06141 | 0.65 | -0.377 | -0.189 | 83.8 | 69.9 | 90.7 | 59.6 | 62.7 | 52.2 |
E015 | chr4 | 156778200 | 156778309 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.261 | 0.08107 | NA | NA | NA | 6.9 | 0.0 | 5.0 | 1.0 | 0.0 | 1.0 |
E016 | chr4 | 156779087 | 156779158 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.391 | 0.9744 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 |
E017 | chr4 | 156810836 | 156810868 | TRUE | OK | 219.3 | 0.00453 | 0.003068 | 0.2366 | 0.414 | 0.207 | 207.1 | 177.3 | 213.5 | 244.2 | 221.3 | 252.3 |
E018 | chr4 | 156810868 | 156810891 | TRUE | OK | 208.0 | 0.00364 | 0.0003585 | 0.0722 | 0.470 | 0.235 | 184.4 | 168.9 | 202.5 | 229.3 | 225.2 | 237.8 |
E019 | chr4 | 156810891 | 156810952 | TRUE | OK | 207.2 | 0.00453 | 0.001414 | 0.1598 | 0.449 | 0.225 | 190.3 | 164.7 | 202.5 | 228.3 | 222.3 | 234.9 |
E020 | chr4 | 156810952 | 156811017 | TRUE | OK | 226.8 | 0.00255 | 3.151e-05 | 0.01324 | 0.489 | 0.245 | 203.1 | 189.8 | 209.5 | 268.1 | 245.8 | 244.6 |
E021 | chr4 | 156835914 | 156836007 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.109 | 0.7525 | NA | NA | NA | 4.9 | 1.0 | 1.0 | 4.0 | 1.0 | 2.9 |
E022 | chr4 | 156850220 | 156850272 | TRUE | OK | 170.9 | 0.00333 | 0.00206 | 0.1933 | 0.413 | 0.206 | 156.8 | 144.9 | 163.2 | 195.6 | 190.0 | 175.0 |
E023 | chr4 | 156850272 | 156850416 | TRUE | OK | 239.0 | 0.0136 | 0.07067 | 0.6641 | 0.378 | 0.189 | 239.6 | 175.2 | 245.8 | 256.1 | 227.2 | 290.1 |
E024 | chr4 | 156861428 | 156861489 | TRUE | OK | 51.4 | 0.0146 | 0.5613 | 0.8753 | 0.144 | 0.072 | 62.1 | 36.5 | 54.4 | 49.6 | 49.9 | 56.1 |
E025 | chr4 | 156873905 | 156873972 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.841 | 0.6164 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
E026 | chr4 | 156967328 | 156967745 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.0736 | 0.01241 | NA | NA | NA | 16.8 | 9.4 | 14.1 | 6.0 | 0.0 | 6.8 |
E027 | chr4 | 156970785 | 156970903 | TRUE | OK | 240.0 | 0.0188 | 0.08999 | 0.689 | 0.422 | 0.211 | 248.5 | 177.3 | 227.6 | 257.1 | 207.6 | 322.0 |
E028 | chr4 | 156970903 | 156970965 | TRUE | OK | 222.0 | 0.0101 | 0.02307 | 0.5133 | 0.436 | 0.218 | 214.0 | 181.4 | 205.5 | 238.3 | 200.8 | 292.0 |
E029 | chr4 | 156970965 | 156971315 | TRUE | OK | 239.9 | 0.0036 | 0.001192 | 0.1458 | 0.419 | 0.209 | 227.8 | 207.5 | 218.6 | 279.0 | 226.2 | 280.4 |
E030 | chr4 | 156971315 | 156971799 | TRUE | OK | 147.7 | 0.027 | 0.5977 | 0.8873 | 0.183 | 0.092 | 162.7 | 118.9 | 153.1 | 201.5 | 143.0 | 107.3 |
J031 | chr4 | 156763206 | 156767772 | TRUE | OK | 230.8 | 0.00309 | 0.5648 | 0.8765 | 0.072 | 0.036 | 244.5 | 213.8 | 246.8 | 236.3 | 214.5 | 229.1 |
J032 | chr4 | 156763206 | 156767961 | TRUE | OK | 10.1 | 0.0147 | 0.5335 | 0.8666 | -0.259 | -0.129 | 11.8 | 8.3 | 14.1 | 12.9 | 6.9 | 6.8 |
J033 | chr4 | 156767876 | 156767961 | TRUE | OK | 16.2 | 0.00843 | 0.0279 | 0.5419 | 0.737 | 0.368 | 11.8 | 14.6 | 12.1 | 25.8 | 17.6 | 15.5 |
J034 | chr4 | 156767990 | 156772685 | TRUE | OK | 224.7 | 0.00531 | 0.9428 | 0.9865 | 0.013 | 0.007 | 229.7 | 212.7 | 256.8 | 214.4 | 193.9 | 240.7 |
J035 | chr4 | 156770643 | 156772685 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.0278 | 0.0567 | NA | NA | NA | 3.9 | 5.2 | 9.1 | 2.0 | 2.9 | 1.9 |
J036 | chr4 | 156772893 | 156773676 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.063 | 0.7061 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 2.0 | 1.0 | 1.9 |
J037 | chr4 | 156772893 | 156774371 | TRUE | OK | 41.7 | 0.00402 | 0.254 | 0.777 | -0.241 | -0.121 | 47.3 | 40.7 | 52.4 | 36.7 | 36.2 | 36.7 |
J038 | chr4 | 156772893 | 156778200 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.26 | 0.0806 | NA | NA | NA | 6.9 | 0.0 | 5.0 | 1.0 | 0.0 | 1.0 |
J039 | chr4 | 156772893 | 156810836 | TRUE | OK | 182.2 | 0.00498 | 0.003026 | 0.2352 | 0.442 | 0.221 | 173.5 | 142.9 | 174.2 | 210.5 | 178.2 | 213.7 |
J040 | chr4 | 156772893 | 156835914 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J041 | chr4 | 156778309 | 156779087 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J042 | chr4 | 156779158 | 156810836 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J043 | chr4 | 156810868 | 156810952 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.186 | 0.9988 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 0.0 | 3.9 | 1.0 |
J044 | chr4 | 156811017 | 156850220 | TRUE | OK | 144.7 | 0.00195 | 0.0001092 | 0.03304 | 0.483 | 0.241 | 127.2 | 122.0 | 134.0 | 164.8 | 164.5 | 155.7 |
J045 | chr4 | 156836007 | 156850220 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0564 | 0.9323 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 3.0 | 1.0 | 1.9 |
J046 | chr4 | 156850416 | 156861428 | TRUE | OK | 38.0 | 0.0185 | 0.708 | 0.9224 | 0.103 | 0.051 | 47.3 | 26.1 | 41.3 | 32.8 | 39.2 | 41.6 |
J047 | chr4 | 156850416 | 156970785 | TRUE | OK | 109.0 | 0.019 | 0.04099 | 0.5971 | 0.536 | 0.268 | 109.4 | 74.0 | 98.7 | 116.2 | 99.9 | 155.7 |
J048 | chr4 | 156861489 | 156873905 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.551 | 0.5804 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J049 | chr4 | 156861489 | 156970785 | TRUE | OK | 27.6 | 0.0182 | 0.4657 | 0.8446 | 0.234 | 0.117 | 32.5 | 17.7 | 29.2 | 30.8 | 21.5 | 33.8 |
J050 | chr4 | 156967745 | 156970785 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0409 | 0.002868 | NA | NA | NA | 6.9 | 3.1 | 8.1 | 1.0 | 0.0 | 1.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000145431.11 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |