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Normalized Counts Table (ENSG00000154222.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	52345722	52346203	TRUE	OK	168.9	0.00215	2.062e-05	0.009793	0.518	0.259	146.9	146.0	149.1	181.7	178.2	211.7
E002	chr1	52350592	52352531	TRUE	OK	239.1	0.00177	0.7013	0.9202	-0.039	-0.020	254.4	246.1	255.8	216.4	218.4	243.6
E003	chr1	52352531	52352537	TRUE	OK	30.2	0.00926	0.6005	0.8881	0.138	0.069	23.7	28.2	38.3	26.8	35.3	29.0
E004	chr1	52352537	52353088	TRUE	OK	566.6	0.014	0.1399	0.73	-0.324	-0.162	575.8	817.5	534.8	441.8	513.1	516.3
E005	chr1	52353088	52353223	TRUE	OK	463.4	0.0144	0.04594	0.6134	-0.437	-0.218	478.2	697.6	452.2	337.5	384.9	430.2
E006	chr1	52353223	52353517	TRUE	OK	43.5	0.00796	0.7629	0.9392	-0.061	-0.030	42.4	50.1	46.3	26.8	47.0	48.3
E007	chr1	52353517	52353518	TRUE	OK	274.0	0.012	0.05733	0.6424	-0.382	-0.191	278.1	400.4	277.0	192.6	222.3	273.6
E008	chr1	52353518	52353530	TRUE	OK	281.0	0.0115	0.05401	0.635	-0.379	-0.189	285.9	407.7	285.0	197.6	229.2	280.4
E009	chr1	52353530	52353602	TRUE	OK	342.2	0.00791	0.008362	0.3664	-0.429	-0.214	357.9	474.4	372.7	230.3	289.9	327.8
E010	chr1	52353602	52353647	TRUE	OK	338.0	0.00668	0.03541	0.576	-0.316	-0.158	350.0	443.2	362.6	234.3	304.6	333.6
E011	chr1	52354364	52354454	TRUE	OK	65.0	0.0225	0.4197	0.8301	0.249	0.124	46.3	80.3	60.4	45.7	67.6	89.9
E012	chr1	52354607	52354654	TRUE	OK	304.1	0.00537	0.05722	0.642	-0.262	-0.131	308.6	376.4	340.4	233.3	241.9	323.9
E013	chr1	52354654	52354698	TRUE	OK	266.9	0.00486	0.1548	0.7367	-0.186	-0.093	281.0	302.4	298.1	200.5	224.3	294.9
E014	chr1	52354839	52354865	TRUE	OK	255.4	0.0023	0.2442	0.7737	-0.124	-0.062	268.2	282.6	278.0	208.5	221.3	273.6
E015	chr1	52354865	52354886	TRUE	OK	245.0	0.00206	0.3099	0.7943	-0.107	-0.053	265.2	265.9	259.9	203.5	216.4	259.1
E016	chr1	52354886	52354939	TRUE	OK	269.0	0.00293	0.6795	0.9134	-0.047	-0.023	302.7	263.8	286.1	235.3	249.7	276.5
E017	chr1	52354939	52354965	TRUE	OK	11.8	0.0167	0.3604	0.8109	-0.377	-0.188	12.8	10.4	18.1	11.9	9.8	7.7
E018	chr1	52355397	52355449	TRUE	OK	252.7	0.00461	0.8316	0.9582	-0.031	-0.016	280.0	241.9	275.0	245.2	238.9	234.9
E019	chr1	52355449	52355607	TRUE	OK	18.9	0.0137	0.9395	0.9856	-0.026	-0.013	19.7	16.7	23.2	20.8	20.6	12.6
E020	chr1	52355607	52355666	TRUE	OK	198.2	0.00886	0.3863	0.8191	-0.156	-0.078	239.6	202.3	207.5	202.5	161.6	176.0
E021	chr1	52355770	52355844	TRUE	OK	194.2	0.0034	0.2387	0.7717	-0.155	-0.077	219.9	211.7	204.5	187.6	168.4	173.1
E022	chr1	52356185	52356254	TRUE	OK	186.6	0.00187	0.1911	0.7541	-0.149	-0.074	199.2	216.9	194.4	156.9	174.3	177.9
E023	chr1	52356254	52356302	TRUE	OK	169.0	0.00197	0.1643	0.7414	-0.165	-0.083	181.4	195.0	179.3	145.9	157.7	154.7
E024	chr1	52356383	52356442	TRUE	OK	177.0	0.00241	0.6612	0.9079	-0.054	-0.027	188.3	199.2	175.3	159.8	175.3	164.4
E025	chr1	52356442	52356560	TRUE	OK	18.4	0.012	0.3387	0.8036	-0.319	-0.159	25.6	14.6	23.2	14.9	15.7	16.4
E026	chr1	52356754	52356813	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0622	0.5537	NA	NA	NA	9.9	3.1	13.1	6.0	9.8	14.5
E027	chr1	52357000	52357126	TRUE	OK	201.3	0.00227	0.845	0.9619	-0.024	-0.012	204.1	234.6	195.4	186.6	188.0	199.2
E028	chr1	52357126	52357174	TRUE	OK	14.4	0.0298	0.7121	0.9236	0.175	0.088	17.7	9.4	15.1	7.9	15.7	20.3
E029	chr1	52357525	52357698	TRUE	OK	248.9	0.00209	0.1054	0.703	-0.177	-0.089	261.3	290.9	267.9	227.3	224.3	221.4
E030	chr1	52357780	52357898	TRUE	OK	272.4	0.00163	0.1251	0.7202	-0.154	-0.077	294.8	302.4	294.1	246.2	243.8	253.3
E031	chr1	52357898	52357916	TRUE	OK	50.6	0.00575	0.2585	0.7784	0.238	0.119	49.3	53.2	43.3	45.7	62.7	49.3
E032	chr1	52357916	52358330	TRUE	OK	70.2	0.012	0.01323	0.4289	0.587	0.293	61.1	50.1	66.5	59.6	96.9	87.0
E033	chr1	52358330	52358461	TRUE	OK	306.6	0.00219	0.9535	0.9893	0.006	0.003	327.4	309.7	319.3	295.9	284.0	303.6
E034	chr1	52358685	52358758	TRUE	OK	257.1	0.00318	0.6274	0.8969	-0.059	-0.029	271.2	263.8	283.0	253.2	222.3	249.4
E035	chr1	52359026	52359157	TRUE	OK	287.8	0.00253	0.1989	0.7571	-0.143	-0.072	314.5	301.3	322.3	269.0	253.6	265.9
E036	chr1	52359249	52359357	TRUE	OK	264.5	0.00459	0.6499	0.9043	-0.064	-0.032	285.0	253.4	304.2	253.2	239.9	251.4
E037	chr1	52359458	52359534	TRUE	OK	244.4	0.00719	0.6672	0.9095	0.069	0.034	251.4	222.1	274.0	254.2	211.5	253.3
E038	chr1	52359704	52359820	TRUE	OK	263.4	0.0143	0.2693	0.7821	0.230	0.115	263.3	209.6	292.1	305.8	241.9	267.8
E039	chr1	52359820	52359836	TRUE	OK	177.9	0.0105	0.0323	0.5625	0.414	0.207	170.6	138.7	174.2	219.4	172.4	192.4
E040	chr1	52359836	52359883	TRUE	OK	196.0	0.00874	0.04259	0.6025	0.361	0.181	200.2	160.6	182.3	230.3	185.1	217.5
E041	chr1	52360073	52360196	TRUE	OK	314.2	0.0067	0.05428	0.6356	0.292	0.146	343.1	273.2	279.0	303.8	345.7	340.3
E042	chr1	52360196	52360233	TRUE	OK	231.0	0.00953	0.1894	0.7535	0.234	0.117	264.3	214.8	190.4	208.5	258.5	249.4
E043	chr1	52360423	52360548	TRUE	OK	348.9	0.00403	0.1944	0.7559	0.163	0.081	380.6	324.3	332.4	320.7	356.5	379.0
E044	chr1	52360548	52360549	TRUE	OK	205.9	0.0048	0.2433	0.7733	0.167	0.083	224.8	182.5	202.5	204.5	194.9	226.2
E045	chr1	52360549	52360973	TRUE	OK	14.2	0.0581	0.5294	0.8652	0.284	0.142	21.7	7.3	11.1	14.9	19.6	10.6
E046	chr1	52360973	52361100	TRUE	OK	265.9	0.00774	0.2931	0.7896	0.172	0.086	290.9	223.1	273.0	257.1	248.7	302.6
E047	chr1	52361100	52361132	TRUE	OK	160.8	0.0102	0.4926	0.8534	0.138	0.069	169.6	133.5	177.3	146.9	141.0	196.3
E048	chr1	52361477	52361512	TRUE	OK	20.3	0.0709	0.5271	0.8647	0.338	0.169	22.7	8.3	25.2	17.9	13.7	33.8
E049	chr1	52361512	52361616	TRUE	OK	203.6	0.0159	0.4763	0.8483	0.159	0.080	204.1	163.7	236.7	226.4	167.5	223.3
E050	chr1	52362601	52362746	TRUE	OK	268.4	0.00811	0.04305	0.6038	0.332	0.166	243.5	213.8	296.1	283.9	272.2	300.7
E051	chr1	52364551	52364634	TRUE	OK	214.1	0.00532	0.04193	0.6006	0.297	0.149	200.2	175.2	231.7	212.5	223.3	241.7
E052	chr1	52366068	52366156	TRUE	OK	155.9	0.00425	0.01263	0.4222	0.361	0.181	138.0	127.2	166.2	157.9	166.5	179.8
E053	chr1	52366156	52366179	TRUE	OK	20.3	0.103	0.8875	0.973	-0.219	-0.110	36.5	7.3	24.2	22.8	17.6	13.5
E054	chr1	52366179	52366193	TRUE	OK	11.2	0.2	0.9528	0.9891	-0.247	-0.124	23.7	2.1	12.1	15.9	7.8	5.8
J055	chr1	52346203	52353517	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.172	0.6242	NA	NA	NA	1.0	0.0	1.0	1.0	0.0	0.0
J056	chr1	52353223	52353517	TRUE	OK	254.5	0.0125	0.04394	0.6069	-0.419	-0.210	260.3	381.6	254.8	181.7	200.8	247.5
J057	chr1	52353223	52353602	TRUE	OK	11.4	0.0489	0.1189	0.715	-0.809	-0.405	7.9	19.8	17.1	3.0	9.8	10.6
J058	chr1	52353647	52354364	TRUE	OK	26.0	0.00785	0.7827	0.9452	-0.076	-0.038	22.7	36.5	24.2	18.9	28.4	25.1
J059	chr1	52353647	52354607	TRUE	OK	188.1	0.00154	6.501e-06	0.003845	-0.497	-0.249	209.0	244.0	225.6	131.0	149.8	169.2
J060	chr1	52354454	52354607	TRUE	OK	33.8	0.0299	0.2797	0.785	0.383	0.192	21.7	44.8	26.2	27.8	31.3	51.2
J061	chr1	52354698	52354839	TRUE	OK	235.5	0.00278	0.2267	0.7676	-0.137	-0.068	245.5	265.9	255.8	185.7	200.8	259.1
J062	chr1	52354939	52355397	TRUE	OK	203.6	0.00625	0.9994	0.9998	-0.004	-0.002	237.6	184.6	214.5	197.6	191.9	195.3
J063	chr1	52355449	52355607	TRUE	OK	161.7	0.00621	0.4537	0.8406	-0.121	-0.060	184.4	165.8	174.2	166.8	130.2	148.9
J064	chr1	52355666	52355770	TRUE	OK	144.1	0.00633	0.2691	0.782	-0.183	-0.092	163.7	157.5	155.1	148.9	117.5	121.8
J065	chr1	52355844	52356185	TRUE	OK	113.0	0.00243	0.2456	0.7741	-0.162	-0.081	128.2	135.6	107.8	93.3	106.7	106.4
J066	chr1	52356302	52356383	TRUE	OK	133.9	0.00167	0.5158	0.861	-0.081	-0.040	135.1	158.5	136.0	118.1	127.3	128.6
J067	chr1	52356442	52356754	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5437	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J068	chr1	52356442	52357000	TRUE	OK	122.2	0.00446	0.8038	0.9509	-0.042	-0.021	127.2	148.1	111.8	118.1	119.5	108.3
J069	chr1	52357126	52357525	TRUE	OK	114.3	0.00191	0.7806	0.9446	-0.037	-0.019	113.4	135.6	112.8	102.3	110.7	111.2
J070	chr1	52357174	52357525	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J071	chr1	52357698	52357780	TRUE	OK	134.8	0.00349	0.01538	0.4514	-0.349	-0.174	146.9	164.7	156.1	126.1	110.7	104.4
J072	chr1	52357898	52358330	TRUE	OK	140.4	0.00177	0.5522	0.8724	-0.072	-0.036	157.8	143.9	147.1	128.1	127.3	138.3
J073	chr1	52357916	52358330	TRUE	OK	21.1	0.00655	0.5435	0.8698	-0.178	-0.089	22.7	26.1	21.2	22.8	18.6	15.5
J074	chr1	52358461	52358685	TRUE	OK	201.2	0.0015	0.9467	0.9874	0.007	0.004	203.1	210.6	213.5	197.6	180.2	202.1
J075	chr1	52358758	52359026	TRUE	OK	171.5	0.00454	0.9245	0.9823	-0.015	-0.007	190.3	163.7	184.3	174.7	152.8	163.4
J076	chr1	52359157	52359249	TRUE	OK	157.3	0.00192	0.1066	0.7042	-0.195	-0.097	177.5	161.6	182.3	138.0	140.0	144.1
J077	chr1	52359357	52359458	TRUE	OK	183.2	0.00282	0.9668	0.9922	0.006	0.003	188.3	179.3	203.5	178.7	156.7	192.4
J078	chr1	52359534	52359704	TRUE	OK	162.2	0.0135	0.3576	0.81	0.195	0.098	161.7	130.3	183.3	185.7	140.0	172.1
J079	chr1	52359820	52360073	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.904	0.3439	NA	NA	NA	0.0	0.0	0.0	3.0	0.0	0.0
J080	chr1	52359836	52360073	FALSE	LOW_COUNTS_INDEP_FILTER	8.2	0.0505	0.02585	NA	NA	NA	5.9	2.1	7.1	7.9	17.6	8.7
J081	chr1	52359883	52360073	TRUE	OK	162.1	0.00873	0.1323	0.7245	0.275	0.138	173.5	139.7	149.1	185.7	144.9	179.8
J082	chr1	52360233	52360423	TRUE	OK	196.8	0.0108	0.3628	0.8115	0.182	0.091	221.9	192.9	165.2	157.9	226.2	216.6
J083	chr1	52360549	52360973	TRUE	OK	200.9	0.00381	0.1973	0.7564	0.173	0.087	215.9	179.3	198.4	200.5	188.0	223.3
J084	chr1	52361132	52361477	FALSE	LOW_COUNTS_INDEP_FILTER	8.2	0.259	0.3333	NA	NA	NA	7.9	0.0	10.1	6.9	4.9	19.3
J085	chr1	52361132	52361512	TRUE	OK	84.1	0.00799	0.6868	0.9157	-0.081	-0.041	85.8	76.1	107.8	78.4	67.6	88.9
J086	chr1	52361616	52362601	TRUE	OK	120.6	0.0179	0.2875	0.7877	0.261	0.131	117.3	90.7	137.0	144.9	101.8	131.5
J087	chr1	52362746	52364551	TRUE	OK	200.6	0.00517	0.02209	0.507	0.338	0.169	183.4	162.7	214.5	189.6	215.4	237.8
J088	chr1	52364634	52366068	TRUE	OK	150.2	0.00309	0.006395	0.3274	0.368	0.184	129.2	125.1	160.1	151.9	161.6	173.1
N089	chr1	52344944	52346059	TRUE	OK	98.2	0.00233	0.0001271	0.03662	0.560	0.280	84.8	84.5	82.6	104.2	101.8	131.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000154222.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE