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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chrX | 48922027 | 48922205 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.156 | 0.5781 | NA | NA | NA | 4.9 | 6.3 | 0.0 | 2.0 | 2.0 | 4.8 |
E002 | chrX | 48922205 | 48922210 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.0466 | 0.5434 | NA | NA | NA | 9.9 | 14.6 | 3.0 | 7.9 | 8.8 | 8.7 |
E003 | chrX | 48922210 | 48922211 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0532 | 0.6352 | NA | NA | NA | 9.9 | 15.6 | 3.0 | 8.9 | 8.8 | 9.7 |
E004 | chrX | 48922211 | 48922639 | TRUE | OK | 490.4 | 0.00655 | 0.2643 | 0.7806 | -0.173 | -0.086 | 425.0 | 556.8 | 432.1 | 493.4 | 515.1 | 520.2 |
E005 | chrX | 48922639 | 48922910 | TRUE | OK | 721.2 | 0.00378 | 0.311 | 0.7947 | -0.119 | -0.060 | 635.0 | 756.0 | 647.6 | 736.6 | 774.6 | 777.3 |
E006 | chrX | 48922910 | 48922942 | TRUE | OK | 386.9 | 0.00813 | 0.3678 | 0.8129 | -0.153 | -0.076 | 351.0 | 428.6 | 330.4 | 404.1 | 370.2 | 437.0 |
E007 | chrX | 48922942 | 48923136 | TRUE | OK | 641.8 | 0.00866 | 0.3466 | 0.8062 | -0.162 | -0.081 | 567.0 | 717.4 | 555.0 | 711.8 | 616.0 | 683.6 |
E008 | chrX | 48923136 | 48923295 | TRUE | OK | 621.1 | 0.00683 | 0.6515 | 0.9049 | -0.076 | -0.038 | 519.6 | 686.1 | 528.8 | 690.0 | 659.1 | 642.9 |
E009 | chrX | 48923632 | 48923746 | TRUE | OK | 511.1 | 0.00257 | 0.3152 | 0.7961 | 0.100 | 0.050 | 404.3 | 496.3 | 447.2 | 576.8 | 604.2 | 537.6 |
E010 | chrX | 48923850 | 48924052 | TRUE | OK | 722.8 | 0.00132 | 0.7613 | 0.9388 | 0.023 | 0.012 | 654.7 | 652.7 | 648.7 | 766.4 | 832.4 | 782.2 |
E011 | chrX | 48925846 | 48925933 | TRUE | OK | 544.6 | 0.00506 | 0.9297 | 0.9834 | 0.009 | 0.005 | 537.4 | 466.1 | 476.4 | 567.9 | 592.5 | 627.5 |
E012 | chrX | 48925933 | 48926050 | TRUE | OK | 581.4 | 0.0101 | 0.4955 | 0.8542 | 0.115 | 0.058 | 582.7 | 456.7 | 486.5 | 598.7 | 654.2 | 709.7 |
E013 | chrX | 48934463 | 48934581 | TRUE | OK | 569.9 | 0.0117 | 0.2952 | 0.7901 | 0.188 | 0.094 | 575.8 | 421.3 | 462.3 | 609.6 | 653.2 | 697.1 |
E014 | chrX | 48934581 | 48934612 | TRUE | OK | 461.5 | 0.0121 | 0.2504 | 0.7755 | 0.213 | 0.107 | 460.5 | 332.6 | 375.7 | 485.5 | 538.6 | 576.2 |
E015 | chrX | 48934612 | 48934695 | TRUE | OK | 24.3 | 0.012 | 0.1629 | 0.7406 | 0.435 | 0.217 | 21.7 | 16.7 | 17.1 | 24.8 | 40.2 | 25.1 |
E016 | chrX | 48934695 | 48934710 | TRUE | OK | 25.9 | 0.00876 | 0.3399 | 0.804 | 0.269 | 0.135 | 24.7 | 15.6 | 23.2 | 25.8 | 35.3 | 30.9 |
E017 | chrX | 48934710 | 48934867 | TRUE | OK | 636.9 | 0.00999 | 0.2537 | 0.7768 | 0.192 | 0.096 | 628.1 | 466.1 | 536.8 | 681.1 | 759.9 | 749.3 |
E018 | chrX | 48934953 | 48935018 | TRUE | OK | 465.0 | 0.00584 | 0.3532 | 0.8084 | 0.127 | 0.064 | 442.7 | 366.0 | 404.9 | 496.4 | 527.8 | 552.1 |
E019 | chrX | 48936190 | 48936339 | TRUE | OK | 25.5 | 0.0167 | 0.3686 | 0.813 | 0.298 | 0.149 | 17.7 | 22.9 | 21.2 | 19.9 | 35.3 | 35.8 |
E020 | chrX | 48936339 | 48936358 | TRUE | OK | 14.1 | 0.0532 | 0.5952 | 0.8864 | -0.213 | -0.107 | 11.8 | 13.6 | 16.1 | 6.9 | 12.7 | 23.2 |
E021 | chrX | 48944189 | 48944283 | TRUE | OK | 455.1 | 0.00575 | 0.1719 | 0.7449 | 0.188 | 0.094 | 395.4 | 350.4 | 417.0 | 508.3 | 508.2 | 551.1 |
E022 | chrX | 48956976 | 48956980 | TRUE | OK | 338.6 | 0.00614 | 0.2303 | 0.7693 | 0.174 | 0.087 | 293.8 | 259.6 | 314.3 | 370.3 | 379.0 | 414.8 |
E023 | chrX | 48956980 | 48957056 | TRUE | OK | 426.6 | 0.00626 | 0.3928 | 0.8215 | 0.119 | 0.060 | 373.7 | 327.4 | 415.0 | 478.5 | 473.0 | 492.1 |
E024 | chrX | 48957056 | 48957189 | TRUE | OK | 382.7 | 0.00334 | 0.7336 | 0.9306 | 0.040 | 0.020 | 352.0 | 315.9 | 360.6 | 456.7 | 419.1 | 391.6 |
E025 | chrX | 48957189 | 48957440 | TRUE | OK | 310.9 | 0.0406 | 0.1267 | 0.7213 | -0.457 | -0.228 | 358.9 | 274.2 | 349.5 | 387.2 | 332.0 | 163.4 |
E026 | chrX | 48957440 | 48957472 | TRUE | OK | 131.7 | 0.127 | 0.05052 | 0.6268 | -0.957 | -0.478 | 194.2 | 132.4 | 157.1 | 156.9 | 123.4 | 26.1 |
E027 | chrX | 48957472 | 48957480 | TRUE | OK | 85.6 | 0.575 | 0.1702 | 0.7443 | -1.210 | -0.605 | 148.9 | 83.4 | 103.7 | 114.2 | 60.7 | 2.9 |
E028 | chrX | 48957480 | 48957520 | TRUE | OK | 92.6 | 0.541 | 0.1738 | 0.7457 | -1.139 | -0.570 | 155.8 | 89.7 | 111.8 | 129.1 | 65.6 | 3.9 |
E029 | chrX | 48957520 | 48957599 | TRUE | OK | 139.6 | 0.117 | 0.2573 | 0.7781 | -0.467 | -0.234 | 180.4 | 101.1 | 164.2 | 209.5 | 142.0 | 40.6 |
E030 | chrX | 48957599 | 48957631 | TRUE | OK | 94.0 | 0.0913 | 0.7953 | 0.9486 | 0.222 | 0.111 | 94.7 | 44.8 | 95.7 | 154.9 | 128.3 | 45.4 |
E031 | chrX | 48957631 | 48957894 | TRUE | OK | 216.3 | 0.0435 | 0.5363 | 0.8676 | 0.258 | 0.129 | 206.1 | 125.1 | 204.5 | 321.7 | 289.9 | 150.8 |
E032 | chrX | 48958231 | 48958386 | TRUE | OK | 136.1 | 0.0032 | 6.151e-06 | 0.003689 | 0.641 | 0.321 | 104.5 | 86.5 | 95.7 | 185.7 | 169.4 | 175.0 |
J033 | chrX | 48922910 | 48923136 | TRUE | OK | 38.8 | 0.00419 | 0.0942 | 0.6927 | 0.370 | 0.185 | 24.7 | 38.6 | 28.2 | 47.7 | 50.9 | 42.5 |
J034 | chrX | 48923295 | 48923632 | TRUE | OK | 215.8 | 0.0028 | 0.3635 | 0.8117 | 0.109 | 0.055 | 166.6 | 216.9 | 182.3 | 237.3 | 265.4 | 226.2 |
J035 | chrX | 48923746 | 48923850 | TRUE | OK | 330.9 | 0.00133 | 0.3229 | 0.7987 | 0.090 | 0.045 | 267.2 | 313.9 | 293.1 | 380.2 | 391.7 | 339.4 |
J036 | chrX | 48924052 | 48925846 | TRUE | OK | 429.5 | 0.00503 | 0.8248 | 0.9564 | -0.030 | -0.015 | 420.0 | 381.6 | 380.7 | 424.9 | 467.1 | 502.8 |
J037 | chrX | 48926050 | 48934463 | TRUE | OK | 314.2 | 0.0129 | 0.3081 | 0.7938 | 0.197 | 0.099 | 321.4 | 238.8 | 237.7 | 341.5 | 340.8 | 405.1 |
J038 | chrX | 48934612 | 48934695 | TRUE | OK | 14.3 | 0.0104 | 0.2663 | 0.7812 | 0.402 | 0.201 | 13.8 | 7.3 | 12.1 | 13.9 | 22.5 | 16.4 |
J039 | chrX | 48934612 | 48934710 | TRUE | OK | 349.9 | 0.0129 | 0.3352 | 0.8025 | 0.179 | 0.089 | 362.9 | 243.0 | 289.1 | 382.2 | 400.5 | 421.5 |
J040 | chrX | 48934867 | 48934953 | TRUE | OK | 364.4 | 0.00571 | 0.3053 | 0.7931 | 0.144 | 0.072 | 346.1 | 284.7 | 313.2 | 373.3 | 440.7 | 428.3 |
J041 | chrX | 48935018 | 48936190 | TRUE | OK | 9.9 | 0.011 | 0.01785 | 0.4749 | 1.031 | 0.515 | 7.9 | 5.2 | 4.0 | 11.9 | 15.7 | 14.5 |
J042 | chrX | 48935018 | 48944189 | TRUE | OK | 290.6 | 0.00483 | 0.121 | 0.7167 | 0.210 | 0.105 | 262.3 | 221.1 | 250.8 | 331.6 | 321.2 | 356.8 |
J043 | chrX | 48936358 | 48944189 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.15 | 0.9858 | NA | NA | NA | 3.9 | 4.2 | 10.1 | 3.0 | 4.9 | 15.5 |
J044 | chrX | 48944283 | 48956976 | TRUE | OK | 315.9 | 0.00572 | 0.2053 | 0.7598 | 0.181 | 0.091 | 281.0 | 244.0 | 282.0 | 340.5 | 354.5 | 393.5 |
J045 | chrX | 48944283 | 48956980 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J046 | chrX | 48944283 | 48958231 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0702 | 0.7514 | NA | NA | NA | 5.9 | 3.1 | 13.1 | 9.9 | 4.9 | 7.7 |
J047 | chrX | 48957440 | 48957472 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J048 | chrX | 48957480 | 48957520 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.477 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N049 | chrX | 48923298 | 48923632 | TRUE | OK | 42.9 | 0.0172 | 0.2558 | 0.7776 | 0.312 | 0.156 | 32.5 | 46.9 | 24.2 | 49.6 | 45.0 | 59.0 |
N050 | chrX | 48944280 | 48956976 | TRUE | OK | 10.9 | 0.0553 | 0.1743 | 0.746 | 0.690 | 0.345 | 2.0 | 7.3 | 13.1 | 16.9 | 13.7 | 12.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000068308.13 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |