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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Mean Normalized Coverage Counts | |
no | yes | ||||||||||||
E001 | chr1 | 52345722 | 52346203 | TRUE | OK | 168.9 | 0.00215 | 2.062e-05 | 0.009793 | 0.518 | 0.259 | 147.3 | 190.6 |
E002 | chr1 | 52350592 | 52352531 | TRUE | OK | 239.1 | 0.00177 | 0.7013 | 0.9202 | -0.039 | -0.020 | 252.2 | 226.2 |
E003 | chr1 | 52352531 | 52352537 | TRUE | OK | 30.2 | 0.00926 | 0.6005 | 0.8881 | 0.138 | 0.069 | 30.0 | 30.4 |
E004 | chr1 | 52352537 | 52353088 | TRUE | OK | 566.6 | 0.014 | 0.1399 | 0.73 | -0.324 | -0.162 | 642.5 | 490.4 |
E005 | chr1 | 52353088 | 52353223 | TRUE | OK | 463.4 | 0.0144 | 0.04594 | 0.6134 | -0.437 | -0.218 | 542.4 | 384.3 |
E006 | chr1 | 52353223 | 52353517 | TRUE | OK | 43.5 | 0.00796 | 0.7629 | 0.9392 | -0.061 | -0.030 | 46.2 | 40.8 |
E007 | chr1 | 52353517 | 52353518 | TRUE | OK | 274.0 | 0.012 | 0.05733 | 0.6424 | -0.382 | -0.191 | 318.2 | 229.6 |
E008 | chr1 | 52353518 | 52353530 | TRUE | OK | 281.0 | 0.0115 | 0.05401 | 0.635 | -0.379 | -0.189 | 326.0 | 235.8 |
E009 | chr1 | 52353530 | 52353602 | TRUE | OK | 342.2 | 0.00791 | 0.008362 | 0.3664 | -0.429 | -0.214 | 401.4 | 282.8 |
E010 | chr1 | 52353602 | 52353647 | TRUE | OK | 338.0 | 0.00668 | 0.03541 | 0.576 | -0.316 | -0.158 | 385.0 | 291.0 |
E011 | chr1 | 52354364 | 52354454 | TRUE | OK | 65.0 | 0.0225 | 0.4197 | 0.8301 | 0.249 | 0.124 | 62.2 | 67.8 |
E012 | chr1 | 52354607 | 52354654 | TRUE | OK | 304.1 | 0.00537 | 0.05722 | 0.642 | -0.262 | -0.131 | 341.6 | 266.5 |
E013 | chr1 | 52354654 | 52354698 | TRUE | OK | 266.9 | 0.00486 | 0.1548 | 0.7367 | -0.186 | -0.093 | 293.8 | 240.1 |
E014 | chr1 | 52354839 | 52354865 | TRUE | OK | 255.4 | 0.0023 | 0.2442 | 0.7737 | -0.124 | -0.062 | 276.2 | 234.7 |
E015 | chr1 | 52354865 | 52354886 | TRUE | OK | 245.0 | 0.00206 | 0.3099 | 0.7943 | -0.107 | -0.053 | 263.7 | 226.5 |
E016 | chr1 | 52354886 | 52354939 | TRUE | OK | 269.0 | 0.00293 | 0.6795 | 0.9134 | -0.047 | -0.023 | 284.4 | 253.9 |
E017 | chr1 | 52354939 | 52354965 | TRUE | OK | 11.8 | 0.0167 | 0.3604 | 0.8109 | -0.377 | -0.188 | 13.8 | 9.8 |
E018 | chr1 | 52355397 | 52355449 | TRUE | OK | 252.7 | 0.00461 | 0.8316 | 0.9582 | -0.031 | -0.016 | 265.8 | 239.7 |
E019 | chr1 | 52355449 | 52355607 | TRUE | OK | 18.9 | 0.0137 | 0.9395 | 0.9856 | -0.026 | -0.013 | 19.9 | 18.0 |
E020 | chr1 | 52355607 | 52355666 | TRUE | OK | 198.2 | 0.00886 | 0.3863 | 0.8191 | -0.156 | -0.078 | 216.6 | 180.0 |
E021 | chr1 | 52355770 | 52355844 | TRUE | OK | 194.2 | 0.0034 | 0.2387 | 0.7717 | -0.155 | -0.077 | 212.0 | 176.3 |
E022 | chr1 | 52356185 | 52356254 | TRUE | OK | 186.6 | 0.00187 | 0.1911 | 0.7541 | -0.149 | -0.074 | 203.4 | 169.8 |
E023 | chr1 | 52356254 | 52356302 | TRUE | OK | 169.0 | 0.00197 | 0.1643 | 0.7414 | -0.165 | -0.083 | 185.1 | 152.8 |
E024 | chr1 | 52356383 | 52356442 | TRUE | OK | 177.0 | 0.00241 | 0.6612 | 0.9079 | -0.054 | -0.027 | 187.5 | 166.5 |
E025 | chr1 | 52356442 | 52356560 | TRUE | OK | 18.4 | 0.012 | 0.3387 | 0.8036 | -0.319 | -0.159 | 21.2 | 15.7 |
E026 | chr1 | 52356754 | 52356813 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0622 | 0.5537 | NA | NA | NA | NA | NA |
E027 | chr1 | 52357000 | 52357126 | TRUE | OK | 201.3 | 0.00227 | 0.845 | 0.9619 | -0.024 | -0.012 | 211.2 | 191.3 |
E028 | chr1 | 52357126 | 52357174 | TRUE | OK | 14.4 | 0.0298 | 0.7121 | 0.9236 | 0.175 | 0.088 | 14.1 | 14.7 |
E029 | chr1 | 52357525 | 52357698 | TRUE | OK | 248.9 | 0.00209 | 0.1054 | 0.703 | -0.177 | -0.089 | 273.2 | 224.3 |
E030 | chr1 | 52357780 | 52357898 | TRUE | OK | 272.4 | 0.00163 | 0.1251 | 0.7202 | -0.154 | -0.077 | 297.1 | 247.8 |
E031 | chr1 | 52357898 | 52357916 | TRUE | OK | 50.6 | 0.00575 | 0.2585 | 0.7784 | 0.238 | 0.119 | 48.6 | 52.6 |
E032 | chr1 | 52357916 | 52358330 | TRUE | OK | 70.2 | 0.012 | 0.01323 | 0.4289 | 0.587 | 0.293 | 59.3 | 81.2 |
E033 | chr1 | 52358330 | 52358461 | TRUE | OK | 306.6 | 0.00219 | 0.9535 | 0.9893 | 0.006 | 0.003 | 318.9 | 294.5 |
E034 | chr1 | 52358685 | 52358758 | TRUE | OK | 257.1 | 0.00318 | 0.6274 | 0.8969 | -0.059 | -0.029 | 272.7 | 241.6 |
E035 | chr1 | 52359026 | 52359157 | TRUE | OK | 287.8 | 0.00253 | 0.1989 | 0.7571 | -0.143 | -0.072 | 312.8 | 262.8 |
E036 | chr1 | 52359249 | 52359357 | TRUE | OK | 264.5 | 0.00459 | 0.6499 | 0.9043 | -0.064 | -0.032 | 281.0 | 248.1 |
E037 | chr1 | 52359458 | 52359534 | TRUE | OK | 244.4 | 0.00719 | 0.6672 | 0.9095 | 0.069 | 0.034 | 249.3 | 239.7 |
E038 | chr1 | 52359704 | 52359820 | TRUE | OK | 263.4 | 0.0143 | 0.2693 | 0.7821 | 0.230 | 0.115 | 255.1 | 271.8 |
E039 | chr1 | 52359820 | 52359836 | TRUE | OK | 177.9 | 0.0105 | 0.0323 | 0.5625 | 0.414 | 0.207 | 161.3 | 194.7 |
E040 | chr1 | 52359836 | 52359883 | TRUE | OK | 196.0 | 0.00874 | 0.04259 | 0.6025 | 0.361 | 0.181 | 181.2 | 211.0 |
E041 | chr1 | 52360073 | 52360196 | TRUE | OK | 314.2 | 0.0067 | 0.05428 | 0.6356 | 0.292 | 0.146 | 298.6 | 330.0 |
E042 | chr1 | 52360196 | 52360233 | TRUE | OK | 231.0 | 0.00953 | 0.1894 | 0.7535 | 0.234 | 0.117 | 223.3 | 238.9 |
E043 | chr1 | 52360423 | 52360548 | TRUE | OK | 348.9 | 0.00403 | 0.1944 | 0.7559 | 0.163 | 0.081 | 346.0 | 352.1 |
E044 | chr1 | 52360548 | 52360549 | TRUE | OK | 205.9 | 0.0048 | 0.2433 | 0.7733 | 0.167 | 0.083 | 203.4 | 208.6 |
E045 | chr1 | 52360549 | 52360973 | TRUE | OK | 14.2 | 0.0581 | 0.5294 | 0.8652 | 0.284 | 0.142 | 13.4 | 15.0 |
E046 | chr1 | 52360973 | 52361100 | TRUE | OK | 265.9 | 0.00774 | 0.2931 | 0.7896 | 0.172 | 0.086 | 262.5 | 269.6 |
E047 | chr1 | 52361100 | 52361132 | TRUE | OK | 160.8 | 0.0102 | 0.4926 | 0.8534 | 0.138 | 0.069 | 160.3 | 161.5 |
E048 | chr1 | 52361477 | 52361512 | TRUE | OK | 20.3 | 0.0709 | 0.5271 | 0.8647 | 0.338 | 0.169 | 18.8 | 21.8 |
E049 | chr1 | 52361512 | 52361616 | TRUE | OK | 203.6 | 0.0159 | 0.4763 | 0.8483 | 0.159 | 0.080 | 201.6 | 205.7 |
E050 | chr1 | 52362601 | 52362746 | TRUE | OK | 268.4 | 0.00811 | 0.04305 | 0.6038 | 0.332 | 0.166 | 251.3 | 285.6 |
E051 | chr1 | 52364551 | 52364634 | TRUE | OK | 214.1 | 0.00532 | 0.04193 | 0.6006 | 0.297 | 0.149 | 202.5 | 225.9 |
E052 | chr1 | 52366068 | 52366156 | TRUE | OK | 155.9 | 0.00425 | 0.01263 | 0.4222 | 0.361 | 0.181 | 143.9 | 168.1 |
E053 | chr1 | 52366156 | 52366179 | TRUE | OK | 20.3 | 0.103 | 0.8875 | 0.973 | -0.219 | -0.110 | 22.7 | 18.0 |
E054 | chr1 | 52366179 | 52366193 | TRUE | OK | 11.2 | 0.2 | 0.9528 | 0.9891 | -0.247 | -0.124 | 12.7 | 9.8 |
J055 | chr1 | 52346203 | 52353517 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.172 | 0.6242 | NA | NA | NA | NA | NA |
J056 | chr1 | 52353223 | 52353517 | TRUE | OK | 254.5 | 0.0125 | 0.04394 | 0.6069 | -0.419 | -0.210 | 298.7 | 210.1 |
J057 | chr1 | 52353223 | 52353602 | TRUE | OK | 11.4 | 0.0489 | 0.1189 | 0.715 | -0.809 | -0.405 | 14.9 | 7.8 |
J058 | chr1 | 52353647 | 52354364 | TRUE | OK | 26.0 | 0.00785 | 0.7827 | 0.9452 | -0.076 | -0.038 | 27.7 | 24.2 |
J059 | chr1 | 52353647 | 52354607 | TRUE | OK | 188.1 | 0.00154 | 6.501e-06 | 0.003845 | -0.497 | -0.249 | 226.0 | 150.2 |
J060 | chr1 | 52354454 | 52354607 | TRUE | OK | 33.8 | 0.0299 | 0.2797 | 0.785 | 0.383 | 0.192 | 30.8 | 36.8 |
J061 | chr1 | 52354698 | 52354839 | TRUE | OK | 235.5 | 0.00278 | 0.2267 | 0.7676 | -0.137 | -0.068 | 255.6 | 215.4 |
J062 | chr1 | 52354939 | 52355397 | TRUE | OK | 203.6 | 0.00625 | 0.9994 | 0.9998 | -0.004 | -0.002 | 212.5 | 194.9 |
J063 | chr1 | 52355449 | 52355607 | TRUE | OK | 161.7 | 0.00621 | 0.4537 | 0.8406 | -0.121 | -0.060 | 174.9 | 148.6 |
J064 | chr1 | 52355666 | 52355770 | TRUE | OK | 144.1 | 0.00633 | 0.2691 | 0.782 | -0.183 | -0.092 | 158.8 | 129.4 |
J065 | chr1 | 52355844 | 52356185 | TRUE | OK | 113.0 | 0.00243 | 0.2456 | 0.7741 | -0.162 | -0.081 | 123.8 | 102.2 |
J066 | chr1 | 52356302 | 52356383 | TRUE | OK | 133.9 | 0.00167 | 0.5158 | 0.861 | -0.081 | -0.040 | 143.0 | 124.7 |
J067 | chr1 | 52356442 | 52356754 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.5437 | NA | NA | NA | NA | NA |
J068 | chr1 | 52356442 | 52357000 | TRUE | OK | 122.2 | 0.00446 | 0.8038 | 0.9509 | -0.042 | -0.021 | 128.9 | 115.3 |
J069 | chr1 | 52357126 | 52357525 | TRUE | OK | 114.3 | 0.00191 | 0.7806 | 0.9446 | -0.037 | -0.019 | 120.4 | 108.1 |
J070 | chr1 | 52357174 | 52357525 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J071 | chr1 | 52357698 | 52357780 | TRUE | OK | 134.8 | 0.00349 | 0.01538 | 0.4514 | -0.349 | -0.174 | 155.8 | 113.7 |
J072 | chr1 | 52357898 | 52358330 | TRUE | OK | 140.4 | 0.00177 | 0.5522 | 0.8724 | -0.072 | -0.036 | 149.7 | 131.2 |
J073 | chr1 | 52357916 | 52358330 | TRUE | OK | 21.1 | 0.00655 | 0.5435 | 0.8698 | -0.178 | -0.089 | 23.3 | 18.9 |
J074 | chr1 | 52358461 | 52358685 | TRUE | OK | 201.2 | 0.0015 | 0.9467 | 0.9874 | 0.007 | 0.004 | 209.0 | 193.3 |
J075 | chr1 | 52358758 | 52359026 | TRUE | OK | 171.5 | 0.00454 | 0.9245 | 0.9823 | -0.015 | -0.007 | 179.6 | 163.6 |
J076 | chr1 | 52359157 | 52359249 | TRUE | OK | 157.3 | 0.00192 | 0.1066 | 0.7042 | -0.195 | -0.097 | 173.9 | 140.7 |
J077 | chr1 | 52359357 | 52359458 | TRUE | OK | 183.2 | 0.00282 | 0.9668 | 0.9922 | 0.006 | 0.003 | 190.5 | 176.0 |
J078 | chr1 | 52359534 | 52359704 | TRUE | OK | 162.2 | 0.0135 | 0.3576 | 0.81 | 0.195 | 0.098 | 158.6 | 165.9 |
J079 | chr1 | 52359820 | 52360073 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.904 | 0.3439 | NA | NA | NA | NA | NA |
J080 | chr1 | 52359836 | 52360073 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.2 | 0.0505 | 0.02585 | NA | NA | NA | NA | NA |
J081 | chr1 | 52359883 | 52360073 | TRUE | OK | 162.1 | 0.00873 | 0.1323 | 0.7245 | 0.275 | 0.138 | 154.2 | 170.1 |
J082 | chr1 | 52360233 | 52360423 | TRUE | OK | 196.8 | 0.0108 | 0.3628 | 0.8115 | 0.182 | 0.091 | 193.4 | 200.3 |
J083 | chr1 | 52360549 | 52360973 | TRUE | OK | 200.9 | 0.00381 | 0.1973 | 0.7564 | 0.173 | 0.087 | 198.1 | 204.0 |
J084 | chr1 | 52361132 | 52361477 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.2 | 0.259 | 0.3333 | NA | NA | NA | NA | NA |
J085 | chr1 | 52361132 | 52361512 | TRUE | OK | 84.1 | 0.00799 | 0.6868 | 0.9157 | -0.081 | -0.041 | 90.0 | 78.3 |
J086 | chr1 | 52361616 | 52362601 | TRUE | OK | 120.6 | 0.0179 | 0.2875 | 0.7877 | 0.261 | 0.131 | 115.1 | 126.1 |
J087 | chr1 | 52362746 | 52364551 | TRUE | OK | 200.6 | 0.00517 | 0.02209 | 0.507 | 0.338 | 0.169 | 187.0 | 214.4 |
J088 | chr1 | 52364634 | 52366068 | TRUE | OK | 150.2 | 0.00309 | 0.006395 | 0.3274 | 0.368 | 0.184 | 138.2 | 162.2 |
N089 | chr1 | 52344944 | 52346059 | TRUE | OK | 98.2 | 0.00233 | 0.0001271 | 0.03662 | 0.560 | 0.280 | 83.9 | 112.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000154222.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |