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Normalized Counts Table (ENSG00000112200.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr6	57086843	57086908	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E002	chr6	57090009	57090029	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.148	0.8778	NA	NA	NA	2.0	0.0	1.0	2.0	1.0	0.0
E003	chr6	57090029	57090075	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.069	0.809	NA	NA	NA	3.0	2.1	1.0	3.0	2.0	1.0
E004	chr6	57090075	57090076	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.069	0.809	NA	NA	NA	3.0	2.1	1.0	3.0	2.0	1.0
E005	chr6	57090076	57090112	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.085	0.303	NA	NA	NA	3.9	2.1	1.0	3.0	2.9	8.7
E006	chr6	57090112	57090138	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0846	0.8964	NA	NA	NA	7.9	5.2	2.0	4.0	3.9	10.6
E007	chr6	57090138	57090168	TRUE	OK	10.4	0.0553	0.2212	0.7651	0.673	0.336	11.8	6.3	4.0	7.9	12.7	19.3
E008	chr6	57090168	57090187	TRUE	OK	25.4	0.0177	0.2072	0.7603	0.423	0.211	21.7	16.7	22.2	23.8	25.5	42.5
E009	chr6	57090187	57090188	TRUE	OK	25.6	0.0184	0.2342	0.7706	0.399	0.200	22.7	15.6	23.2	23.8	25.5	42.5
E010	chr6	57090188	57090206	TRUE	OK	41.4	0.0277	0.2381	0.7716	0.373	0.187	35.5	18.8	46.3	37.7	46.0	63.8
E011	chr6	57090206	57090210	TRUE	OK	48.1	0.0299	0.2754	0.7833	0.360	0.180	43.4	22.9	51.4	43.7	49.0	78.3
E012	chr6	57090210	57090224	TRUE	OK	65.1	0.0208	0.1968	0.7564	0.336	0.168	63.1	30.2	67.5	63.5	73.4	92.8
E013	chr6	57090224	57090274	TRUE	OK	114.7	0.0126	0.02589	0.5305	0.457	0.228	105.5	54.2	110.8	129.1	139.1	149.9
E014	chr6	57090782	57090810	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.057	0.8832	NA	NA	NA	2.0	3.1	2.0	4.0	3.9	1.0
E015	chr6	57090810	57090832	TRUE	OK	138.4	0.016	0.1027	0.7006	0.337	0.168	135.1	65.7	142.0	156.9	166.5	164.4
E016	chr6	57090832	57090894	TRUE	OK	191.6	0.0195	0.1977	0.7567	0.262	0.131	192.3	91.8	205.5	223.4	224.3	212.7
E017	chr6	57091429	57091452	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.423	0.771	NA	NA	NA	1.0	0.0	0.0	2.0	0.0	0.0
E018	chr6	57092784	57093051	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.345	0.118	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	2.9
E019	chr6	57099060	57099141	TRUE	OK	218.6	0.0256	0.2995	0.7915	0.215	0.108	227.8	100.1	240.7	267.1	238.0	237.8
E020	chr6	57099468	57099568	FALSE	LOW_COUNTS_INDEP_FILTER	7.8	0.0194	0.395	NA	NA	NA	8.9	6.3	10.1	9.9	4.9	6.8
E021	chr6	57099568	57099610	FALSE	LOW_COUNTS_INDEP_FILTER	5.9	0.0252	0.8491	NA	NA	NA	4.9	3.1	8.1	6.9	4.9	7.7
E022	chr6	57100602	57100789	TRUE	OK	54.4	0.0508	0.7336	0.9307	-0.247	-0.123	65.1	21.9	79.6	67.5	45.0	47.4
E023	chr6	57100789	57100953	TRUE	OK	39.6	0.0375	0.6814	0.9141	-0.200	-0.100	49.3	18.8	51.4	40.7	27.4	50.3
E024	chr6	57100953	57102560	TRUE	OK	246.0	0.0124	0.6205	0.8947	-0.103	-0.052	286.9	175.2	253.8	313.7	205.6	240.7
E025	chr6	57102560	57102879	TRUE	OK	63.3	0.0059	0.04056	0.5959	-0.413	-0.207	86.8	51.1	66.5	62.5	57.8	55.1
E026	chr6	57102879	57109716	TRUE	OK	439.3	0.00381	1.054e-09	2.253e-06	-0.720	-0.360	536.4	458.8	528.8	425.9	319.2	366.4
E027	chr6	57124428	57124523	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.147	0.6246	NA	NA	NA	0.0	0.0	3.0	2.0	2.0	1.0
E028	chr6	57124733	57124859	TRUE	OK	213.4	0.0248	0.1966	0.7564	0.283	0.141	228.8	95.9	216.6	245.2	237.0	257.2
E029	chr6	57126531	57126599	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0877	0.5707	NA	NA	NA	1.0	3.1	0.0	2.0	2.9	1.9
E030	chr6	57128728	57128786	TRUE	OK	156.1	0.0245	0.306	0.7933	0.214	0.107	176.5	70.9	158.1	184.7	165.5	180.8
E031	chr6	57128786	57128810	TRUE	OK	152.1	0.028	0.3633	0.8116	0.186	0.093	180.4	67.8	151.1	173.7	169.4	170.2
E032	chr6	57128810	57128840	TRUE	OK	157.2	0.0189	0.162	0.7401	0.297	0.149	175.5	76.1	144.0	193.6	163.5	190.5
E033	chr6	57133041	57133154	TRUE	OK	230.6	0.0194	0.2208	0.7649	0.244	0.122	262.3	115.7	215.5	281.0	250.7	258.1
E034	chr6	57133154	57133176	TRUE	OK	168.3	0.00995	0.08058	0.6778	0.306	0.153	177.5	91.8	153.1	196.6	184.1	206.9
E035	chr6	57133176	57133192	TRUE	OK	141.5	0.0115	0.2468	0.7744	0.210	0.105	151.8	77.2	139.0	172.7	141.0	167.3
E036	chr6	57134743	57134870	TRUE	OK	183.0	0.0117	0.09204	0.6909	0.305	0.153	181.4	94.9	183.3	221.4	196.8	220.4
E037	chr6	57141301	57141368	TRUE	OK	156.9	0.0188	0.1816	0.7496	0.278	0.139	171.6	75.1	151.1	184.7	167.5	191.4
E038	chr6	57141368	57141455	TRUE	OK	135.5	0.013	0.364	0.8118	0.167	0.084	152.8	77.2	127.9	158.8	162.6	133.4
E039	chr6	57141947	57142095	TRUE	OK	185.1	0.00507	0.2421	0.7728	0.157	0.078	194.2	114.7	182.3	211.5	204.7	203.0
E040	chr6	57147089	57148693	TRUE	OK	1204.3	0.00551	0.0495	0.624	0.239	0.120	1168.4	809.2	1204.6	1383.0	1293.6	1367.1
E041	chr6	57150718	57150862	TRUE	OK	254.2	0.00323	0.05424	0.6355	0.235	0.117	248.5	199.2	209.5	297.8	296.7	273.6
E042	chr6	57150862	57151371	TRUE	OK	73.4	0.0442	0.8473	0.9624	0.040	0.020	51.3	98.0	54.4	67.5	89.1	80.2
E043	chr6	57152156	57152220	TRUE	OK	23.4	0.021	0.516	0.8611	-0.210	-0.105	21.7	27.1	22.2	15.9	29.4	24.2
E044	chr6	57152220	57152351	TRUE	OK	249.2	0.00198	0.004349	0.2774	0.306	0.153	222.8	190.8	213.5	288.9	296.7	282.3
E045	chr6	57153860	57154047	TRUE	OK	315.7	0.00236	0.06298	0.6523	0.196	0.098	294.8	237.7	296.1	333.6	364.3	367.4
E046	chr6	57154047	57154160	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.115	0.1166	NA	NA	NA	2.0	7.3	2.0	5.0	14.7	9.7
E047	chr6	57154160	57154544	TRUE	OK	11.7	0.0194	0.002572	0.2175	1.334	0.667	3.0	7.3	8.1	15.9	21.5	14.5
E048	chr6	57160807	57161083	TRUE	OK	12.8	0.013	0.7694	0.9411	-0.114	-0.057	13.8	10.4	13.1	11.9	16.6	10.6
E049	chr6	57161083	57161152	TRUE	OK	214.1	0.00691	0.8589	0.9656	0.015	0.008	225.8	146.0	226.6	206.5	226.2	253.3
E050	chr6	57168422	57168632	TRUE	OK	222.8	0.00287	0.37	0.8135	-0.112	-0.056	244.5	177.3	228.6	226.4	208.6	251.4
E051	chr6	57168632	57168833	TRUE	OK	183.8	0.00297	0.2323	0.77	-0.148	-0.074	186.4	177.3	180.3	186.6	174.3	198.2
E052	chr6	57168833	57170201	TRUE	OK	765.2	0.0266	0.5214	0.8627	-0.175	-0.087	657.7	904.0	701.0	773.4	771.7	783.1
E053	chr6	57170201	57170305	TRUE	OK	28.3	0.00934	0.01337	0.4307	-0.678	-0.339	28.6	35.5	35.3	18.9	24.5	27.1
J054	chr6	57086908	57090810	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J055	chr6	57090274	57090810	TRUE	OK	118.7	0.00847	0.01093	0.4044	0.459	0.230	109.4	58.4	111.8	138.0	144.9	149.9
J056	chr6	57090274	57090832	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.6314	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J057	chr6	57090274	57099060	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0784	0.2554	NA	NA	NA	2.0	0.0	0.0	2.0	1.0	2.9
J058	chr6	57090894	57099060	TRUE	OK	173.6	0.0194	0.1853	0.7511	0.274	0.137	176.5	82.4	182.3	203.5	202.7	194.3
J059	chr6	57090894	57141947	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J060	chr6	57091452	57092784	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J061	chr6	57093051	57099060	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J062	chr6	57099141	57099468	FALSE	LOW_COUNTS_INDEP_FILTER	6.2	0.0218	0.5566	NA	NA	NA	5.9	6.3	7.1	9.9	2.9	4.8
J063	chr6	57099141	57100602	TRUE	OK	33.9	0.0925	0.7745	0.9426	-0.286	-0.143	43.4	10.4	51.4	47.7	26.4	24.2
J064	chr6	57099141	57124428	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J065	chr6	57099141	57124733	TRUE	OK	124.5	0.0234	0.1041	0.7016	0.385	0.193	126.2	52.1	123.9	146.9	147.9	149.9
J066	chr6	57099568	57124733	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.63	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J067	chr6	57102879	57124733	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0132	0.7351	NA	NA	NA	8.9	6.3	7.1	7.9	8.8	5.8
J068	chr6	57124859	57126531	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.13	0.2677	NA	NA	NA	1.0	0.0	0.0	0.0	2.0	1.9
J069	chr6	57124859	57128728	TRUE	OK	105.1	0.0194	0.354	0.8087	0.190	0.095	114.4	50.1	110.8	114.2	112.6	128.6
J070	chr6	57128840	57133041	TRUE	OK	144.2	0.015	0.1611	0.7395	0.276	0.138	159.7	73.0	133.0	174.7	155.7	169.2
J071	chr6	57133192	57134743	TRUE	OK	128.0	0.0118	0.2394	0.7719	0.217	0.108	136.1	67.8	127.9	159.8	130.2	146.0
J072	chr6	57134870	57141301	TRUE	OK	108.2	0.0199	0.08338	0.6813	0.407	0.203	108.5	46.9	104.8	139.0	112.6	137.3
J073	chr6	57141455	57141947	TRUE	OK	105.4	0.00857	0.4073	0.8262	0.145	0.072	115.4	64.6	100.7	122.1	128.3	101.5
J074	chr6	57142095	57147089	TRUE	OK	107.9	0.00875	0.7857	0.9459	0.039	0.019	120.3	67.8	110.8	120.1	96.9	131.5
J075	chr6	57142095	57161083	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J076	chr6	57148693	57150718	TRUE	OK	132.7	0.00335	0.4672	0.8451	0.103	0.051	138.0	110.5	110.8	153.9	149.8	133.4
J077	chr6	57148693	57152220	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0975	0.5626	NA	NA	NA	4.9	2.1	8.1	1.0	3.9	7.7
J078	chr6	57150862	57152220	TRUE	OK	118.5	0.0022	0.003013	0.2349	0.403	0.201	109.4	85.5	90.7	147.9	128.3	148.9
J079	chr6	57152351	57153860	TRUE	OK	164.4	0.00317	0.008478	0.3687	0.353	0.176	131.1	128.3	146.0	186.6	209.6	184.7
J080	chr6	57154047	57161083	TRUE	OK	156.1	0.00494	0.8051	0.9512	0.027	0.014	161.7	106.4	166.2	155.9	158.6	187.6
J081	chr6	57161152	57168422	TRUE	OK	148.7	0.00544	0.641	0.9014	-0.078	-0.039	162.7	112.6	154.1	139.0	144.0	179.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000112200.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE