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Raw Counts Table (ENSG00000137171.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr6	43040776	43041124	TRUE	OK	133.9	0.0235	0.4997	0.8556	-0.204	-0.102	132.0	84.0	127.0	175.0	141.0	151.0
E002	chr6	43043057	43043508	TRUE	OK	139.6	0.00462	0.00334	0.2455	-0.456	-0.228	141.0	113.0	135.0	142.0	148.0	164.0
E003	chr6	43059025	43059271	TRUE	OK	22.8	0.0159	0.2187	0.7644	-0.389	-0.194	27.0	16.0	20.0	17.0	34.0	24.0
E004	chr6	43059404	43059630	TRUE	OK	128.9	0.0106	0.0302	0.5525	-0.451	-0.225	119.0	136.0	103.0	141.0	126.0	152.0
E005	chr6	43059630	43059646	TRUE	OK	10.8	0.0156	0.07781	0.6747	0.785	0.392	6.0	5.0	7.0	12.0	15.0	21.0
E006	chr6	43059646	43059651	TRUE	OK	11.8	0.0139	0.02528	0.5268	0.957	0.478	6.0	5.0	7.0	16.0	16.0	22.0
E007	chr6	43059651	43059652	TRUE	OK	20.9	0.0162	0.03025	0.5528	0.770	0.385	13.0	7.0	15.0	25.0	27.0	40.0
E008	chr6	43059652	43059685	TRUE	OK	41.3	0.0104	0.007365	0.3482	0.698	0.349	26.0	16.0	30.0	59.0	55.0	65.0
E009	chr6	43059856	43059882	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0326	0.1223	NA	NA	NA	2.0	2.0	2.0	4.0	8.0	8.0
E010	chr6	43059882	43059886	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0366	0.2432	NA	NA	NA	2.0	2.0	2.0	4.0	8.0	5.0
E011	chr6	43059886	43059889	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0431	0.1409	NA	NA	NA	2.0	2.0	2.0	4.0	11.0	5.0
E012	chr6	43059889	43059894	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0429	0.1063	NA	NA	NA	3.0	2.0	2.0	4.0	13.0	7.0
E013	chr6	43059894	43060159	TRUE	OK	43.0	0.00548	0.07785	0.6748	0.402	0.201	32.0	22.0	32.0	52.0	66.0	57.0
E014	chr6	43060159	43060182	TRUE	OK	31.5	0.00877	0.2731	0.783	0.293	0.147	28.0	17.0	21.0	41.0	38.0	46.0
E015	chr6	43060182	43060186	TRUE	OK	27.0	0.00713	0.115	0.7122	0.439	0.220	20.0	14.0	19.0	33.0	36.0	42.0
E016	chr6	43060186	43060238	TRUE	OK	32.0	0.00687	0.1336	0.7255	0.395	0.198	22.0	17.0	25.0	33.0	46.0	51.0
E017	chr6	43060238	43060276	TRUE	OK	22.3	0.00814	0.3651	0.8121	0.274	0.137	18.0	13.0	16.0	26.0	28.0	34.0
E018	chr6	43060276	43060517	TRUE	OK	34.8	0.011	0.4085	0.8266	0.229	0.114	31.0	21.0	23.0	39.0	40.0	57.0
E019	chr6	43060517	43060605	TRUE	OK	27.4	0.00877	0.1376	0.7283	0.425	0.212	22.0	18.0	14.0	33.0	34.0	45.0
E020	chr6	43061061	43061310	TRUE	OK	38.8	0.0545	0.2015	0.7585	0.624	0.312	20.0	16.0	34.0	26.0	63.0	77.0
E021	chr6	43061310	43061583	TRUE	OK	185.2	0.00281	0.01068	0.401	0.331	0.165	127.0	123.0	137.0	232.0	262.0	241.0
E022	chr6	43061583	43061587	TRUE	OK	94.8	0.00547	0.05287	0.6328	0.345	0.172	62.0	71.0	62.0	125.0	139.0	115.0
E023	chr6	43061587	43061593	TRUE	OK	97.3	0.005	0.02328	0.5145	0.393	0.197	63.0	71.0	62.0	131.0	139.0	123.0
E024	chr6	43062527	43062885	TRUE	OK	21.5	0.00765	0.7706	0.9414	0.091	0.046	18.0	16.0	15.0	22.0	31.0	28.0
E025	chr6	43062885	43062916	TRUE	OK	13.5	0.0107	0.8279	0.9572	0.084	0.042	10.0	10.0	11.0	14.0	19.0	18.0
E026	chr6	43062916	43062933	TRUE	OK	99.9	0.00687	0.01044	0.3978	0.479	0.239	60.0	70.0	64.0	141.0	145.0	125.0
E027	chr6	43062933	43062982	TRUE	OK	116.6	0.00385	0.004319	0.2765	0.448	0.224	73.0	80.0	77.0	154.0	172.0	150.0
E028	chr6	43062982	43063147	TRUE	OK	197.3	0.0042	0.005696	0.3127	0.396	0.198	129.0	137.0	136.0	245.0	303.0	245.0
E029	chr6	43065391	43065619	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0837	0.8906	NA	NA	NA	2.0	4.0	11.0	5.0	12.0	7.0
E030	chr6	43065619	43065701	TRUE	OK	148.5	0.0025	0.3088	0.794	0.136	0.068	106.0	108.0	120.0	169.0	210.0	186.0
E031	chr6	43066305	43066356	TRUE	OK	112.1	0.00282	0.2684	0.7818	0.165	0.083	85.0	77.0	87.0	128.0	161.0	141.0
E032	chr6	43066356	43066458	TRUE	OK	125.0	0.00292	0.6565	0.9064	0.066	0.033	98.0	85.0	106.0	135.0	175.0	158.0
E033	chr6	43066458	43066481	TRUE	OK	83.2	0.00857	0.905	0.9774	0.032	0.016	77.0	51.0	67.0	79.0	122.0	108.0
E034	chr6	43066481	43066522	TRUE	OK	81.9	0.0142	0.5669	0.8772	0.141	0.071	75.0	43.0	66.0	79.0	121.0	113.0
E035	chr6	43066522	43066525	TRUE	OK	75.4	0.0183	0.5563	0.8736	0.163	0.081	69.0	38.0	61.0	69.0	111.0	110.0
E036	chr6	43066995	43067079	TRUE	OK	109.0	0.00366	0.2402	0.7723	0.190	0.095	89.0	69.0	82.0	114.0	160.0	147.0
E037	chr6	43067079	43067083	TRUE	OK	70.6	0.00379	0.4937	0.8537	0.124	0.062	57.0	55.0	47.0	81.0	99.0	88.0
E038	chr6	43067083	43067397	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0197	0.7137	NA	NA	NA	4.0	7.0	8.0	8.0	10.0	8.0
E039	chr6	43070345	43070353	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0865	0.5449	NA	NA	NA	2.0	11.0	6.0	3.0	9.0	10.0
E040	chr6	43070353	43070455	TRUE	OK	121.8	0.00286	0.3821	0.8177	0.131	0.066	88.0	97.0	89.0	123.0	172.0	168.0
E041	chr6	43070455	43070691	FALSE	LOW_COUNTS_INDEP_FILTER	9.5	0.0276	0.9152	NA	NA	NA	3.0	11.0	8.0	13.0	10.0	12.0
E042	chr6	43070691	43070865	TRUE	OK	151.4	0.00234	0.2379	0.7715	0.156	0.078	111.0	109.0	118.0	166.0	199.0	214.0
E043	chr6	43071274	43071374	TRUE	OK	122.2	0.00254	0.1673	0.7429	0.196	0.098	84.0	93.0	91.0	138.0	162.0	172.0
E044	chr6	43071566	43071619	TRUE	OK	106.2	0.00291	0.4722	0.8469	0.110	0.055	84.0	81.0	76.0	116.0	137.0	149.0
E045	chr6	43071851	43071922	TRUE	OK	121.4	0.00305	0.4847	0.851	0.106	0.053	93.0	91.0	92.0	125.0	158.0	176.0
E046	chr6	43072146	43072243	TRUE	OK	135.8	0.00384	0.4616	0.8433	0.112	0.056	99.0	115.0	94.0	143.0	176.0	195.0
E047	chr6	43072243	43072255	TRUE	OK	93.0	0.00633	0.8593	0.9656	0.038	0.019	74.0	81.0	62.0	90.0	119.0	137.0
E048	chr6	43072740	43072823	TRUE	OK	12.1	0.0484	0.06934	0.6616	-0.844	-0.422	13.0	15.0	11.0	3.0	18.0	13.0
E049	chr6	43072823	43072887	TRUE	OK	124.9	0.00526	0.6697	0.9102	-0.067	-0.033	93.0	116.0	94.0	118.0	161.0	173.0
E050	chr6	43072887	43072963	TRUE	OK	127.0	0.00367	0.4273	0.8322	-0.119	-0.060	92.0	118.0	104.0	126.0	158.0	169.0
E051	chr6	43072963	43072964	TRUE	OK	102.5	0.0038	0.8201	0.9551	-0.039	-0.020	69.0	93.0	84.0	111.0	128.0	134.0
E052	chr6	43073222	43073338	TRUE	OK	154.9	0.003	0.3832	0.8181	-0.120	-0.060	119.0	143.0	121.0	160.0	193.0	200.0
E053	chr6	43073338	43073647	TRUE	OK	21.2	0.03	0.9672	0.9923	-0.047	-0.023	13.0	27.0	11.0	21.0	26.0	30.0
E054	chr6	43073683	43073901	TRUE	OK	25.9	0.0086	0.3055	0.7932	0.300	0.150	17.0	23.0	14.0	25.0	39.0	39.0
E055	chr6	43073901	43073965	TRUE	OK	131.8	0.00349	0.6621	0.9082	-0.059	-0.029	109.0	112.0	98.0	124.0	176.0	178.0
E056	chr6	43074621	43074908	TRUE	OK	162.5	0.0055	0.5897	0.8846	-0.082	-0.041	122.0	152.0	122.0	153.0	217.0	216.0
E057	chr6	43074908	43075087	TRUE	OK	55.4	0.00656	0.09446	0.6929	-0.356	-0.178	43.0	60.0	47.0	55.0	58.0	71.0
E058	chr6	43075087	43075089	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.193	0.1642	NA	NA	NA	8.0	0.0	1.0	9.0	9.0	10.0
E059	chr6	43075089	43075093	FALSE	LOW_COUNTS_INDEP_FILTER	5.9	0.193	0.1839	NA	NA	NA	8.0	0.0	1.0	8.0	10.0	9.0
E060	chr6	43075093	43075095	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.255	0.4732	NA	NA	NA	8.0	0.0	1.0	3.0	8.0	8.0
J061	chr6	43041124	43043057	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.147	0.5975	NA	NA	NA	1.0	0.0	0.0	0.0	1.0	2.0
J062	chr6	43043508	43059025	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr6	43059271	43059404	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.196	0.4004	NA	NA	NA	2.0	1.0	0.0	0.0	2.0	0.0
J064	chr6	43059685	43061310	TRUE	OK	31.5	0.0273	0.1134	0.7114	0.541	0.270	20.0	11.0	28.0	48.0	39.0	45.0
J065	chr6	43059685	43062916	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J066	chr6	43060159	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.301	0.2922	NA	NA	NA	1.0	0.0	3.0	0.0	2.0	0.0
J067	chr6	43060182	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0609	0.9639	NA	NA	NA	2.0	0.0	2.0	2.0	1.0	3.0
J068	chr6	43060186	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.185	0.08261	NA	NA	NA	0.0	0.0	0.0	2.0	3.0	0.0
J069	chr6	43060238	43061310	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.165	0.0223	NA	NA	NA	0.0	2.0	2.0	0.0	0.0	0.0
J070	chr6	43060276	43060517	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.121	0.5751	NA	NA	NA	0.0	0.0	1.0	1.0	1.0	1.0
J071	chr6	43060605	43061310	TRUE	OK	9.9	0.0199	0.7502	0.9353	-0.150	-0.075	12.0	8.0	5.0	14.0	10.0	11.0
J072	chr6	43061593	43062885	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.267	0.3881	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J073	chr6	43061593	43062916	TRUE	OK	83.8	0.00779	0.04678	0.6161	0.400	0.200	53.0	60.0	55.0	118.0	123.0	98.0
J074	chr6	43061593	43062982	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.14	0.7999	NA	NA	NA	2.0	1.0	0.0	0.0	2.0	4.0
J075	chr6	43061593	43065619	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J076	chr6	43063147	43065619	TRUE	OK	112.5	0.00273	0.1897	0.7538	0.192	0.096	78.0	80.0	89.0	138.0	160.0	136.0
J077	chr6	43065701	43066305	TRUE	OK	89.9	0.00196	0.2362	0.7712	0.180	0.090	64.0	70.0	64.0	101.0	125.0	120.0
J078	chr6	43066525	43066995	TRUE	OK	71.8	0.0192	0.6199	0.8945	0.146	0.073	66.0	37.0	58.0	63.0	106.0	106.0
J079	chr6	43067083	43070353	TRUE	OK	67.7	0.00255	0.4412	0.8366	0.134	0.067	54.0	52.0	46.0	77.0	95.0	86.0
J080	chr6	43070455	43070691	TRUE	OK	86.3	0.00224	0.2456	0.7741	0.185	0.092	68.0	59.0	63.0	90.0	123.0	120.0
J081	chr6	43070865	43071274	TRUE	OK	71.0	0.00839	0.4227	0.8307	0.170	0.085	46.0	51.0	60.0	84.0	79.0	110.0
J082	chr6	43071374	43071566	TRUE	OK	80.6	0.00211	0.5577	0.874	0.094	0.047	62.0	64.0	58.0	89.0	108.0	107.0
J083	chr6	43071374	43071851	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.265	0.7759	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	0.0
J084	chr6	43071619	43071851	TRUE	OK	89.5	0.00253	0.3618	0.8113	0.147	0.073	70.0	68.0	62.0	90.0	123.0	129.0
J085	chr6	43071619	43072146	FALSE	LOW_COUNTS_INDEP_FILTER	4.7	0.0889	0.5704	NA	NA	NA	4.0	7.0	2.0	8.0	5.0	2.0
J086	chr6	43071922	43072146	TRUE	OK	91.3	0.00306	0.2272	0.7678	0.195	0.098	61.0	70.0	69.0	100.0	115.0	138.0
J087	chr6	43072255	43072740	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0169	0.2629	NA	NA	NA	7.0	7.0	5.0	3.0	8.0	9.0
J088	chr6	43072255	43072823	TRUE	OK	74.7	0.00555	0.5716	0.8787	0.112	0.056	56.0	64.0	49.0	74.0	95.0	114.0
J089	chr6	43072964	43073222	TRUE	OK	99.5	0.00274	0.9675	0.9923	-0.008	-0.004	68.0	90.0	78.0	110.0	124.0	131.0
J090	chr6	43073338	43073901	TRUE	OK	88.3	0.00314	0.2246	0.7667	-0.191	-0.095	76.0	81.0	68.0	79.0	111.0	119.0
J091	chr6	43073965	43074621	TRUE	OK	91.2	0.00338	0.9666	0.9922	0.013	0.006	73.0	78.0	64.0	85.0	125.0	127.0
N092	chr6	43040746	43040914	TRUE	OK	67.2	0.059	0.7229	0.927	-0.229	-0.115	73.0	28.0	74.0	88.0	73.0	71.0
N093	chr6	43041075	43042801	TRUE	OK	63.2	0.0185	0.8639	0.9669	0.036	0.018	61.0	37.0	50.0	84.0	67.0	84.0
N094	chr6	43042984	43043073	TRUE	OK	75.7	0.0198	0.1419	0.731	-0.414	-0.207	88.0	53.0	69.0	84.0	70.0	94.0
N095	chr6	43043180	43043447	TRUE	OK	62.2	0.00275	0.008873	0.3756	-0.463	-0.232	55.0	58.0	62.0	65.0	67.0	68.0
N096	chr6	43043630	43044751	TRUE	OK	63.0	0.00263	0.4594	0.8427	-0.128	-0.064	58.0	50.0	49.0	64.0	82.0	78.0
N097	chr6	43044885	43045226	TRUE	OK	64.2	0.00247	0.501	0.8559	-0.115	-0.057	52.0	54.0	53.0	63.0	81.0	85.0
N098	chr6	43045402	43045586	TRUE	OK	73.0	0.0104	0.6458	0.903	-0.094	-0.047	49.0	72.0	58.0	61.0	98.0	103.0
N099	chr6	43045682	43045985	TRUE	OK	81.3	0.00285	0.8962	0.9752	-0.018	-0.009	59.0	69.0	66.0	79.0	103.0	116.0
N100	chr6	43046091	43046235	TRUE	OK	79.2	0.00928	0.1376	0.7282	-0.319	-0.159	80.0	53.0	79.0	81.0	85.0	101.0
N101	chr6	43046407	43046510	TRUE	OK	81.0	0.0137	0.2033	0.7589	-0.314	-0.157	70.0	59.0	87.0	99.0	82.0	92.0
N102	chr6	43046601	43046879	TRUE	OK	63.5	0.0381	0.6542	0.9058	-0.185	-0.092	54.0	36.0	72.0	85.0	56.0	81.0
N103	chr6	43047107	43047946	TRUE	OK	11.7	0.0426	0.5427	0.8696	0.333	0.166	4.0	9.0	11.0	7.0	19.0	21.0
N104	chr6	43047107	43048147	TRUE	OK	46.5	0.0447	0.05897	0.6459	-0.748	-0.374	58.0	32.0	55.0	49.0	29.0	58.0
N105	chr6	43047989	43048147	TRUE	OK	11.2	0.0843	0.7477	0.9346	0.242	0.121	10.0	3.0	11.0	9.0	10.0	25.0
N106	chr6	43048253	43048331	TRUE	OK	61.7	0.0484	0.3011	0.7917	-0.423	-0.211	72.0	37.0	63.0	77.0	45.0	79.0
N107	chr6	43048569	43049406	TRUE	OK	62.1	0.00293	0.8342	0.959	0.038	0.019	51.0	44.0	50.0	70.0	75.0	86.0
N108	chr6	43049662	43049962	TRUE	OK	88.1	0.0109	0.1187	0.7149	-0.331	-0.165	82.0	84.0	70.0	83.0	86.0	127.0
N109	chr6	43050159	43050259	TRUE	OK	121.8	0.0148	0.2868	0.7874	-0.260	-0.130	107.0	85.0	126.0	151.0	133.0	134.0
N110	chr6	43050398	43050967	TRUE	OK	137.5	0.00218	0.0329	0.565	-0.282	-0.141	124.0	106.0	131.0	141.0	161.0	168.0
N111	chr6	43051468	43051611	TRUE	OK	45.0	0.0109	0.2411	0.7727	-0.302	-0.151	44.0	29.0	47.0	53.0	47.0	52.0
N112	chr6	43051763	43052112	TRUE	OK	11.7	0.0122	0.1277	0.7221	-0.599	-0.299	13.0	7.0	15.0	12.0	10.0	14.0
N113	chr6	43051763	43052208	TRUE	OK	57.8	0.0109	0.8973	0.9754	0.021	0.011	51.0	31.0	54.0	68.0	69.0	77.0
N114	chr6	43052796	43053621	TRUE	OK	49.2	0.00345	0.0801	0.6774	-0.346	-0.173	40.0	44.0	49.0	47.0	53.0	64.0
N115	chr6	43054486	43055544	TRUE	OK	617.1	0.0778	0.002675	0.2213	-1.439	-0.718	598.0	831.0	526.0	615.0	533.0	604.0
N116	chr6	43054486	43055896	TRUE	OK	77.4	0.00515	0.0004063	0.07847	-0.647	-0.324	69.0	85.0	77.0	73.0	70.0	92.0
N117	chr6	43054486	43058064	TRUE	OK	55.3	0.00569	2.517e-07	0.0002619	-1.063	-0.532	50.0	74.0	64.0	44.0	48.0	52.0
N118	chr6	43055618	43055896	TRUE	OK	591.1	0.0644	0.0008737	0.1226	-1.454	-0.726	589.0	799.0	506.0	549.0	519.0	589.0
N119	chr6	43056007	43056080	TRUE	OK	548.5	0.0235	1.476e-05	0.007509	-1.162	-0.580	545.0	651.0	493.0	518.0	507.0	587.0
N120	chr6	43056196	43056306	TRUE	OK	642.2	0.0188	7.127e-07	0.0006357	-1.193	-0.595	603.0	731.0	603.0	611.0	638.0	680.0
N121	chr6	43056445	43058064	TRUE	OK	523.8	0.0313	2.758e-05	0.01199	-1.290	-0.644	541.0	637.0	488.0	523.0	429.0	532.0
N122	chr6	43058233	43059285	TRUE	OK	506.7	0.0149	1.424e-06	0.001123	-1.044	-0.521	530.0	552.0	460.0	500.0	473.0	537.0
N123	chr6	43058233	43059782	TRUE	OK	11.7	0.0902	0.1147	0.7119	0.921	0.461	5.0	12.0	1.0	12.0	21.0	20.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000137171.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE