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Normalized Counts Table (ENSG00000133030.21)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	17042544	17042596	TRUE	OK	214.5	0.804	0.251	0.7756	-1.097	-0.549	306.6	254.4	312.2	234.3	176.3	2.9
E002	chr17	17042758	17042759	TRUE	OK	103.3	1.08	0.1885	0.7527	-1.634	-0.817	192.3	124.1	151.1	101.3	50.9	0.0
E003	chr17	17042759	17042806	TRUE	OK	179.0	0.166	0.05009	0.6259	-1.066	-0.533	303.7	184.6	235.7	180.7	146.9	22.2
E004	chr17	17042806	17042848	TRUE	OK	174.4	0.0438	0.08952	0.6888	-0.599	-0.300	283.0	139.7	205.5	168.8	172.4	77.3
E005	chr17	17042848	17042971	TRUE	OK	561.0	0.00412	0.1203	0.7161	-0.191	-0.096	675.4	476.5	634.6	572.8	543.5	463.1
E006	chr17	17057635	17057950	TRUE	OK	44.9	0.0357	0.2131	0.7626	-0.458	-0.229	35.5	68.8	51.4	45.7	27.4	40.6
E007	chr17	17075709	17075787	TRUE	OK	758.1	0.00317	0.5563	0.8736	0.049	0.025	838.1	583.9	808.8	823.0	761.9	732.9
E008	chr17	17078010	17078076	TRUE	OK	780.5	0.00164	0.5835	0.8825	0.037	0.019	833.2	632.9	840.0	834.9	758.9	783.1
E009	chr17	17096767	17097337	TRUE	OK	87.6	0.0315	0.5435	0.8698	-0.225	-0.113	73.0	130.3	79.6	81.4	73.4	88.0
E010	chr17	17126701	17126853	TRUE	OK	1133.9	0.00352	0.1401	0.7301	0.142	0.071	1189.1	851.9	1194.6	1214.2	1157.5	1196.0
E011	chr17	17131616	17131665	TRUE	OK	822.0	0.00701	0.2392	0.7717	0.150	0.075	917.0	574.5	846.1	883.6	807.9	903.0
E012	chr17	17131665	17131701	TRUE	OK	901.9	0.0055	0.1619	0.7401	0.163	0.081	987.0	640.2	926.6	981.9	906.8	968.8
E013	chr17	17136218	17136337	TRUE	OK	1015.5	0.00545	0.3159	0.7963	0.110	0.055	1137.9	735.1	1056.6	1094.1	1010.6	1058.7
E014	chr17	17136337	17136450	TRUE	OK	857.8	0.00512	0.114	0.7118	0.184	0.092	928.8	624.6	857.1	895.5	891.1	949.4
E015	chr17	17137915	17138075	TRUE	OK	781.3	0.00329	0.04134	0.5986	0.201	0.101	834.2	574.5	772.5	854.8	809.9	842.1
E016	chr17	17138075	17138246	TRUE	OK	248.6	0.00339	0.3169	0.7965	0.113	0.057	285.9	187.7	240.7	283.9	241.9	251.4
E017	chr17	17138246	17138419	TRUE	OK	364.0	0.00578	0.1801	0.7489	0.171	0.086	397.4	253.4	374.7	385.2	372.1	401.2
E018	chr17	17138419	17138429	TRUE	OK	243.0	0.0104	0.2453	0.774	0.191	0.096	274.1	154.3	250.8	271.0	229.2	278.4
E019	chr17	17141494	17141760	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.053	0.2503	NA	NA	NA	6.9	0.0	7.1	9.9	5.9	6.8
E020	chr17	17142009	17142312	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0298	0.1169	NA	NA	NA	4.9	6.3	2.0	9.9	4.9	9.7
E021	chr17	17142626	17142765	TRUE	OK	880.8	0.00356	0.4231	0.8308	0.080	0.040	978.1	695.5	892.4	986.8	801.1	931.1
E022	chr17	17143555	17143669	TRUE	OK	798.9	0.00222	0.8424	0.9612	0.020	0.010	874.6	730.9	769.5	890.5	721.7	806.3
E023	chr17	17146035	17146092	TRUE	OK	654.2	0.00274	0.6545	0.9059	0.044	0.022	719.8	597.5	611.4	705.9	603.2	687.4
E024	chr17	17147318	17147387	TRUE	OK	704.8	0.0017	0.2431	0.7731	0.092	0.046	755.3	598.5	689.9	737.6	691.4	756.1
E025	chr17	17149759	17150143	TRUE	OK	11.3	0.0898	0.6127	0.8921	-0.221	-0.111	15.8	12.5	8.1	6.0	19.6	5.8
E026	chr17	17150143	17150233	TRUE	OK	896.1	0.00328	0.4898	0.8527	0.062	0.031	1006.7	720.5	899.4	911.4	886.2	952.3
E027	chr17	17154305	17154351	TRUE	OK	842.6	0.0035	0.4532	0.8404	0.069	0.035	918.0	662.1	883.3	849.8	853.9	888.5
E028	chr17	17154351	17154415	TRUE	OK	961.7	0.00262	0.461	0.8432	0.061	0.030	1037.3	774.7	1008.2	978.9	961.7	1009.4
E029	chr17	17158431	17158496	TRUE	OK	957.0	0.00301	0.6171	0.8935	0.044	0.022	1046.2	774.7	1001.2	1032.5	870.6	1017.1
E030	chr17	17158496	17158715	TRUE	OK	1520.1	0.00117	0.5129	0.8602	0.042	0.021	1641.7	1330.5	1515.9	1659.9	1418.0	1554.7
E031	chr17	17158715	17159002	TRUE	OK	1675.0	0.00061	0.469	0.8458	0.035	0.018	1769.9	1451.5	1734.4	1834.7	1634.4	1625.3
E032	chr17	17161239	17161356	TRUE	OK	889.4	0.000857	0.3936	0.8218	0.052	0.026	938.7	774.7	901.5	968.0	898.0	855.7
E033	chr17	17164108	17165555	TRUE	OK	321.1	0.00479	0.7022	0.9205	0.038	0.019	367.8	238.8	341.4	352.4	292.8	333.6
E034	chr17	17165555	17167915	TRUE	OK	517.5	0.00628	0.8323	0.9584	0.024	0.012	616.3	409.8	509.7	602.6	443.6	523.1
E035	chr17	17170859	17171490	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0542	0.9336	NA	NA	NA	4.9	2.1	4.0	6.9	3.9	1.0
E036	chr17	17171717	17171719	TRUE	OK	596.2	0.00136	0.4648	0.8443	0.057	0.029	628.1	546.4	575.1	647.3	603.2	577.2
E037	chr17	17171719	17171842	TRUE	OK	1194.3	0.000997	0.8989	0.9758	0.009	0.005	1264.1	1107.4	1191.5	1301.5	1138.9	1162.1
E038	chr17	17171842	17171865	TRUE	OK	853.6	0.0028	0.4122	0.8277	-0.073	-0.037	899.2	836.3	881.3	930.2	733.5	841.1
E039	chr17	17172697	17172720	TRUE	OK	878.2	0.00224	0.7975	0.9491	-0.018	-0.009	915.0	839.4	889.4	963.0	779.5	882.7
E040	chr17	17172720	17172815	TRUE	OK	1193.9	0.00203	0.6463	0.9031	-0.033	-0.017	1248.3	1145.9	1217.7	1294.6	1067.4	1189.2
E041	chr17	17173915	17174075	TRUE	OK	1333.4	0.000976	0.8637	0.9668	-0.009	-0.005	1410.0	1230.4	1361.8	1442.5	1234.9	1320.7
E042	chr17	17175292	17175363	TRUE	OK	922.9	0.0011	0.6143	0.8926	0.032	0.016	991.9	791.4	948.8	995.8	865.7	943.6
E043	chr17	17175363	17175412	TRUE	OK	783.2	0.00161	0.3989	0.8236	0.061	0.031	859.8	655.9	779.6	813.1	780.5	810.2
E044	chr17	17176425	17176512	TRUE	OK	1138.4	0.00211	0.4467	0.8385	0.058	0.029	1233.5	954.1	1154.3	1149.7	1164.4	1174.7
E045	chr17	17177249	17177251	TRUE	OK	804.1	0.00241	0.6546	0.9059	0.036	0.018	872.6	681.9	822.9	795.2	807.9	844.0
E046	chr17	17177251	17177396	TRUE	OK	1403.2	0.0012	0.9846	0.9962	-0.002	-0.001	1489.9	1297.1	1415.1	1431.6	1384.7	1400.9
E047	chr17	17177396	17177412	TRUE	OK	948.7	0.00242	0.9594	0.9905	0.007	0.003	987.0	928.0	918.6	985.8	936.2	936.9
E048	chr17	17179557	17179577	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.0676	0.8601	NA	NA	NA	3.0	2.1	1.0	4.0	1.0	1.9
E049	chr17	17180002	17180088	TRUE	OK	1400.1	0.00291	0.4159	0.829	-0.075	-0.037	1470.1	1421.2	1400.0	1426.6	1335.7	1346.8
E050	chr17	17180088	17180150	TRUE	OK	26.0	0.0643	0.5885	0.8842	0.193	0.096	19.7	11.5	41.3	38.7	17.6	27.1
E051	chr17	17180606	17180669	TRUE	OK	450.2	0.00147	0.6892	0.9165	-0.034	-0.017	485.1	430.6	447.2	463.6	435.8	438.9
E052	chr17	17184822	17184861	TRUE	OK	1202.7	0.00471	0.1524	0.7358	-0.167	-0.083	1238.4	1306.5	1250.0	1218.2	1096.8	1106.1
E053	chr17	17184861	17184976	TRUE	OK	1412.0	0.00363	0.2651	0.7808	-0.113	-0.056	1460.3	1476.5	1443.4	1450.5	1312.2	1329.4
E054	chr17	17184976	17185235	TRUE	OK	2052.1	0.00722	0.2275	0.7681	-0.170	-0.085	2116.0	2279.4	2069.8	2018.3	1837.1	1991.7
E055	chr17	17185235	17185554	TRUE	OK	1673.6	0.0107	0.1961	0.7563	-0.222	-0.111	1703.8	1977.0	1681.1	1648.0	1418.0	1613.7
E056	chr17	17185554	17185560	TRUE	OK	204.4	0.00961	0.3329	0.8018	0.165	0.082	238.6	139.7	198.4	253.2	178.2	218.5
E057	chr17	17185560	17186464	TRUE	OK	744.5	0.0223	0.3809	0.8173	0.167	0.084	911.1	421.3	771.5	923.3	684.5	755.1
E058	chr17	17186464	17186648	TRUE	OK	240.9	0.0239	0.3206	0.7981	0.201	0.101	285.9	124.1	260.9	285.9	232.1	256.2
E059	chr17	17186648	17189240	TRUE	OK	1950.2	0.0105	0.1999	0.7578	0.193	0.096	2142.6	1281.5	2063.8	2271.5	1907.6	2034.2
E060	chr17	17189240	17189500	TRUE	OK	189.1	0.00688	0.8964	0.9753	0.012	0.006	219.9	138.7	204.5	224.4	161.6	185.6
E061	chr17	17189500	17192647	TRUE	OK	2289.9	0.002	0.6589	0.9072	0.038	0.019	2343.7	2186.6	2244.1	2453.2	2264.1	2247.9
E062	chr17	17192647	17192648	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.391	0.9735	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	1.0
E063	chr17	17201457	17201633	TRUE	OK	68.0	0.0105	1.772e-05	0.008663	-0.973	-0.487	74.9	98.0	96.7	44.7	48.0	45.4
E064	chr17	17217489	17217679	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0377	0.07643	NA	NA	NA	1.0	4.2	3.0	6.9	7.8	3.9
J065	chr17	17042596	17042806	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.262	0.9709	NA	NA	NA	0.0	1.0	0.0	1.0	0.0	0.0
J066	chr17	17042971	17057635	TRUE	OK	24.4	0.0842	0.3502	0.8075	-0.502	-0.251	15.8	40.7	29.2	19.9	10.8	30.0
J067	chr17	17042971	17075709	TRUE	OK	446.9	0.0031	0.9995	0.9999	-0.011	-0.005	509.8	349.3	482.5	472.6	453.4	413.8
J068	chr17	17075787	17078010	TRUE	OK	603.0	0.00111	0.4411	0.8366	0.052	0.026	627.1	497.4	647.6	640.3	582.7	622.6
J069	chr17	17078076	17096767	TRUE	OK	27.6	0.0236	0.9349	0.9846	-0.021	-0.010	25.6	35.5	22.2	25.8	21.5	34.8
J070	chr17	17078076	17126701	TRUE	OK	611.5	0.00172	0.08183	0.6796	0.139	0.069	633.0	470.3	640.6	662.2	630.7	632.3
J071	chr17	17126853	17131616	TRUE	OK	607.2	0.00517	0.1683	0.7434	0.162	0.081	651.8	433.8	632.5	650.3	600.3	674.9
J072	chr17	17131701	17136218	TRUE	OK	727.3	0.00582	0.3887	0.8198	0.095	0.048	832.2	522.4	752.4	779.3	711.0	766.7
J073	chr17	17136450	17137915	TRUE	OK	513.0	0.00264	0.09473	0.6936	0.159	0.080	546.2	395.2	510.7	530.1	539.6	555.9
J074	chr17	17136450	17138246	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0563	0.4396	NA	NA	NA	2.0	2.1	0.0	3.0	2.9	1.0
J075	chr17	17138075	17142626	TRUE	OK	202.4	0.0114	0.1167	0.7134	0.284	0.142	231.7	126.2	188.4	231.3	191.9	244.6
J076	chr17	17138429	17142626	TRUE	OK	218.1	0.0111	0.3731	0.8144	0.149	0.075	248.5	140.8	229.6	245.2	194.9	249.4
J077	chr17	17141760	17142009	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J078	chr17	17142765	17143555	TRUE	OK	540.3	0.00145	0.8556	0.9646	0.015	0.008	595.5	481.7	530.8	613.5	488.7	531.8
J079	chr17	17142765	17146035	TRUE	OK	21.0	0.0198	0.3369	0.803	0.336	0.168	12.8	17.7	25.2	25.8	16.6	28.0
J080	chr17	17143669	17146035	TRUE	OK	490.8	0.00285	0.9391	0.9856	-0.006	-0.003	544.3	471.3	456.3	533.1	442.6	497.0
J081	chr17	17146092	17147318	TRUE	OK	473.6	0.002	0.4363	0.8349	0.071	0.035	515.7	426.5	441.2	503.3	448.5	506.6
J082	chr17	17147387	17150143	TRUE	OK	558.8	0.00213	0.1779	0.7481	0.117	0.059	610.3	450.5	544.9	580.8	560.1	606.2
J083	chr17	17150233	17154305	TRUE	OK	619.6	0.00369	0.5497	0.8718	0.058	0.029	684.3	493.2	640.6	609.6	619.9	670.0
J084	chr17	17154415	17158431	TRUE	OK	733.7	0.00236	0.5334	0.8666	0.052	0.026	803.6	595.4	758.4	778.3	679.6	787.0
J085	chr17	17154415	17184861	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.562	0.3397	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
J086	chr17	17159002	17161239	TRUE	OK	593.7	0.000951	0.4711	0.8465	0.048	0.024	610.3	504.7	632.5	630.4	610.1	574.3
J087	chr17	17161356	17164108	TRUE	OK	21.0	0.0107	0.3348	0.8025	0.291	0.145	24.7	14.6	17.1	17.9	23.5	28.0
J088	chr17	17161356	17171717	TRUE	OK	535.3	0.000989	0.3081	0.7938	0.074	0.037	559.1	487.0	515.7	572.8	554.3	523.1
J089	chr17	17167915	17171717	TRUE	OK	47.0	0.0105	0.5208	0.8625	-0.144	-0.072	52.3	53.2	42.3	57.6	33.3	43.5
J090	chr17	17171490	17171717	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J091	chr17	17171865	17172697	TRUE	OK	794.9	0.00202	0.5074	0.8583	-0.052	-0.026	835.1	768.5	816.9	857.8	693.3	797.6
J092	chr17	17172815	17173915	TRUE	OK	787.6	0.00161	0.5021	0.8563	-0.050	-0.025	824.3	770.6	801.7	833.9	710.0	785.1
J093	chr17	17172815	17176425	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J094	chr17	17174075	17175292	TRUE	OK	708.0	0.00109	0.3589	0.8105	0.064	0.032	760.2	612.1	701.0	772.4	658.1	744.5
J095	chr17	17174075	17176425	TRUE	OK	55.9	0.00345	0.8832	0.9719	0.025	0.012	50.3	49.0	66.5	62.5	55.8	51.2
J096	chr17	17175412	17176425	TRUE	OK	656.8	0.00122	0.1777	0.748	0.095	0.047	710.9	532.8	658.7	691.0	664.0	683.6
J097	chr17	17176512	17177249	TRUE	OK	797.5	0.00218	0.6616	0.9081	0.034	0.017	863.7	679.9	815.9	784.3	800.1	841.1
J098	chr17	17177412	17180002	TRUE	OK	868.7	0.00234	0.9609	0.9909	-0.002	-0.001	904.2	857.1	841.0	894.5	845.1	870.2
J099	chr17	17179577	17180002	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0856	0.7229	NA	NA	NA	3.0	0.0	1.0	1.0	1.0	1.0
J100	chr17	17180088	17180606	TRUE	OK	332.7	0.0011	0.7625	0.9391	-0.028	-0.014	366.8	311.8	326.3	340.5	327.1	323.9
J101	chr17	17180088	17184822	TRUE	OK	609.5	0.00849	0.1494	0.7344	-0.230	-0.115	609.4	723.6	632.5	602.6	532.7	555.9
J102	chr17	17180088	17201457	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.121	0.455	NA	NA	NA	3.0	1.0	0.0	1.0	1.0	0.0
J103	chr17	17180669	17184822	TRUE	OK	336.7	0.00122	0.4427	0.8372	-0.066	-0.033	356.9	333.7	339.4	359.4	315.3	315.2
J104	chr17	17186648	17189240	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J105	chr17	17201633	17217489	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.349	0.6487	NA	NA	NA	0.0	0.0	2.0	1.0	0.0	0.0
N106	chr17	17203098	17205859	TRUE	OK	11.2	0.0108	0.02595	0.5308	-0.894	-0.447	12.8	13.6	17.1	6.0	10.8	6.8
N107	chr17	17213856	17214984	TRUE	OK	89.2	0.00422	3.604e-06	0.002428	0.774	0.387	59.2	61.5	76.5	106.2	119.5	112.2
N108	chr17	17215090	17215184	TRUE	OK	76.0	0.00623	0.01132	0.4087	0.477	0.238	51.3	60.5	78.6	91.3	88.1	86.0
N109	chr17	17215316	17216379	TRUE	OK	65.4	0.00289	5.027e-06	0.003174	0.790	0.395	45.4	38.6	59.4	87.4	81.3	80.2
N110	chr17	17216503	17217068	TRUE	OK	69.5	0.00722	0.02654	0.5343	0.448	0.224	63.1	64.6	48.3	83.4	69.5	88.0
N111	chr17	17217182	17219018	TRUE	OK	66.9	0.0134	0.5936	0.8859	0.126	0.063	67.0	76.1	48.3	74.5	63.7	71.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000133030.21
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE