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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chrX | 154487305 | 154487310 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.163 | 0.47 | NA | NA | NA | 2.0 | 5.2 | 2.0 | 0.0 | 1.0 | 3.9 |
E002 | chrX | 154487310 | 154487342 | TRUE | OK | 44.8 | 0.0382 | 0.8888 | 0.9733 | -0.056 | -0.028 | 36.5 | 66.7 | 42.3 | 35.7 | 31.3 | 56.1 |
E003 | chrX | 154487342 | 154488286 | TRUE | OK | 1515.6 | 0.00295 | 0.4402 | 0.8362 | 0.075 | 0.038 | 1615.1 | 1627.7 | 1530.0 | 1521.9 | 1371.0 | 1428.0 |
E004 | chrX | 154488286 | 154488496 | TRUE | OK | 821.2 | 0.0025 | 0.9444 | 0.9868 | -0.008 | -0.004 | 929.8 | 826.9 | 866.2 | 825.0 | 702.1 | 777.3 |
E005 | chrX | 154488496 | 154488583 | TRUE | OK | 563.0 | 0.00286 | 0.3024 | 0.7921 | -0.110 | -0.055 | 664.6 | 588.1 | 594.3 | 540.1 | 463.2 | 527.9 |
E006 | chrX | 154488583 | 154489082 | TRUE | OK | 1210.1 | 0.00454 | 0.5385 | 0.8683 | 0.071 | 0.035 | 1409.0 | 1150.1 | 1244.9 | 1257.9 | 1080.1 | 1118.6 |
E007 | chrX | 154489941 | 154490027 | TRUE | OK | 24.6 | 0.0163 | 0.0008838 | 0.1232 | 1.085 | 0.542 | 16.8 | 18.8 | 16.1 | 24.8 | 41.1 | 30.0 |
E008 | chrX | 154490306 | 154490358 | TRUE | OK | 381.8 | 0.0135 | 0.7145 | 0.9244 | 0.081 | 0.040 | 452.6 | 326.4 | 409.9 | 426.9 | 393.7 | 281.3 |
E009 | chrX | 154490358 | 154490593 | TRUE | OK | 354.6 | 0.0374 | 0.3379 | 0.8033 | -0.246 | -0.123 | 450.6 | 369.1 | 389.8 | 390.2 | 358.4 | 169.2 |
E010 | chrX | 154490593 | 154490614 | TRUE | OK | 126.9 | 0.0569 | 0.2602 | 0.7792 | -0.347 | -0.174 | 156.8 | 138.7 | 152.1 | 132.0 | 137.1 | 44.5 |
E011 | chrX | 154490614 | 154490628 | TRUE | OK | 76.8 | 0.0669 | 0.2803 | 0.7851 | -0.354 | -0.177 | 92.7 | 84.5 | 94.7 | 82.4 | 83.2 | 23.2 |
E012 | chrX | 154490628 | 154490629 | TRUE | OK | 33.8 | 0.0584 | 0.521 | 0.8626 | -0.191 | -0.095 | 39.4 | 34.4 | 40.3 | 36.7 | 41.1 | 10.6 |
E013 | chrX | 154490629 | 154490663 | TRUE | OK | 32.3 | 0.0522 | 0.4437 | 0.8374 | -0.252 | -0.126 | 39.4 | 32.3 | 39.3 | 32.8 | 39.2 | 10.6 |
E014 | chrX | 154490663 | 154490677 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0473 | 0.6682 | NA | NA | NA | 4.9 | 4.2 | 2.0 | 4.0 | 2.9 | 1.0 |
E015 | chrX | 154490677 | 154490690 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.384 | 0.2904 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J016 | chrX | 154488496 | 154488583 | TRUE | OK | 48.0 | 0.0034 | 3.616e-06 | 0.002432 | 0.923 | 0.462 | 33.5 | 41.7 | 33.2 | 66.5 | 60.7 | 52.2 |
J017 | chrX | 154489082 | 154489941 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0888 | 0.09604 | NA | NA | NA | 2.0 | 2.1 | 0.0 | 4.0 | 1.0 | 5.8 |
J018 | chrX | 154489082 | 154490306 | TRUE | OK | 319.4 | 0.0154 | 0.5378 | 0.8681 | 0.122 | 0.061 | 395.4 | 245.0 | 341.4 | 358.4 | 319.2 | 257.2 |
J019 | chrX | 154490027 | 154490593 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.6036 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J020 | chrX | 154490358 | 154490593 | TRUE | OK | 19.9 | 0.00752 | 0.001025 | 0.1336 | 1.001 | 0.500 | 14.8 | 11.5 | 17.1 | 22.8 | 23.5 | 30.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000126903.16 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |