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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 42998272 | 42998415 | TRUE | OK | 310.2 | 0.00374 | 0.5208 | 0.8625 | -0.070 | -0.035 | 297.8 | 348.3 | 317.3 | 313.7 | 264.4 | 320.0 |
E002 | chr17 | 42998418 | 42998435 | TRUE | OK | 749.6 | 0.00298 | 0.6998 | 0.9198 | -0.032 | -0.016 | 699.1 | 831.0 | 767.5 | 759.5 | 680.6 | 759.9 |
E003 | chr17 | 42998435 | 42998470 | TRUE | OK | 14468.1 | 0.00279 | 0.7339 | 0.9308 | 0.040 | 0.020 | 13822.9 | 16031.8 | 13634.8 | 15213.5 | 13737.3 | 14368.2 |
E004 | chr17 | 42998470 | 42998471 | TRUE | OK | 14467.2 | 0.00278 | 0.7331 | 0.9305 | 0.040 | 0.020 | 13824.8 | 16032.9 | 13628.7 | 15212.5 | 13736.4 | 14368.2 |
E005 | chr17 | 42998471 | 42998689 | TRUE | OK | 1192.9 | 0.00165 | 4.44e-07 | 0.0004237 | -0.380 | -0.190 | 1283.8 | 1556.8 | 1229.8 | 1142.7 | 973.4 | 970.7 |
E006 | chr17 | 42998689 | 42998748 | TRUE | OK | 1961.6 | 0.0038 | 0.003096 | 0.2375 | -0.307 | -0.153 | 1994.7 | 2539.0 | 2004.4 | 1984.6 | 1749.0 | 1497.6 |
E007 | chr17 | 42998748 | 42998808 | TRUE | OK | 24427.9 | 0.00632 | 0.3557 | 0.8093 | 0.144 | 0.072 | 23392.1 | 26615.4 | 22727.0 | 25795.6 | 23830.8 | 24206.7 |
E008 | chr17 | 42998808 | 42998831 | TRUE | OK | 25885.9 | 0.0073 | 0.2253 | 0.767 | 0.197 | 0.098 | 24713.3 | 28087.7 | 23957.8 | 27319.6 | 25437.8 | 25799.1 |
E009 | chr17 | 42998831 | 42998912 | TRUE | OK | 40.0 | 0.00616 | 0.003096 | 0.2375 | -0.678 | -0.339 | 39.4 | 55.3 | 54.4 | 30.8 | 33.3 | 27.1 |
E010 | chr17 | 42998912 | 42999185 | TRUE | OK | 48.3 | 0.00815 | 0.004724 | 0.2882 | -0.645 | -0.322 | 46.3 | 65.7 | 66.5 | 31.8 | 39.2 | 40.6 |
E011 | chr17 | 42999185 | 42999279 | TRUE | OK | 22.4 | 0.0103 | 0.7686 | 0.9408 | -0.081 | -0.040 | 20.7 | 25.0 | 24.2 | 16.9 | 28.4 | 19.3 |
E012 | chr17 | 42999279 | 42999292 | TRUE | OK | 17.6 | 0.0094 | 0.5681 | 0.8775 | -0.179 | -0.090 | 20.7 | 19.8 | 16.1 | 18.9 | 15.7 | 14.5 |
E013 | chr17 | 42999292 | 42999932 | TRUE | OK | 576.6 | 0.055 | 0.4642 | 0.8441 | -0.156 | -0.078 | 545.3 | 668.4 | 626.5 | 574.8 | 785.4 | 259.1 |
E014 | chr17 | 42999932 | 43000102 | TRUE | OK | 36174.0 | 0.017 | 0.008622 | 0.3709 | 0.643 | 0.310 | 33815.2 | 41189.5 | 33365.3 | 37439.1 | 35890.6 | 35344.6 |
E015 | chr17 | 43002672 | 43002783 | TRUE | OK | 17400.4 | 0.00467 | 0.9168 | 0.9805 | -0.015 | -0.008 | 16829.2 | 20759.5 | 15312.8 | 18027.1 | 16063.1 | 17410.8 |
E016 | chr17 | 43002871 | 43002939 | TRUE | OK | 6967.3 | 0.00462 | 0.6471 | 0.9034 | -0.068 | -0.034 | 6582.6 | 8994.5 | 5945.6 | 6945.6 | 6373.2 | 6962.2 |
E017 | chr17 | 43002939 | 43002946 | TRUE | OK | 1374.6 | 0.0171 | 0.402 | 0.8247 | -0.249 | -0.124 | 1119.1 | 2222.0 | 1168.4 | 1168.5 | 1207.5 | 1362.3 |
E018 | chr17 | 43002946 | 43002948 | TRUE | OK | 805.9 | 0.0184 | 0.3024 | 0.7921 | -0.296 | -0.148 | 691.2 | 1324.3 | 669.8 | 674.1 | 653.2 | 822.8 |
E019 | chr17 | 43002948 | 43002949 | TRUE | OK | 680.2 | 0.0193 | 0.3477 | 0.8067 | -0.285 | -0.143 | 567.9 | 1127.2 | 565.1 | 567.9 | 557.2 | 696.1 |
E020 | chr17 | 43002949 | 43002959 | TRUE | OK | 670.4 | 0.0192 | 0.3093 | 0.7942 | -0.302 | -0.151 | 563.0 | 1113.6 | 562.0 | 555.0 | 544.5 | 684.5 |
J021 | chr17 | 42998415 | 42998748 | TRUE | OK | 20.3 | 0.0157 | 0.4472 | 0.8387 | -0.254 | -0.127 | 14.8 | 22.9 | 29.2 | 21.8 | 15.7 | 17.4 |
J022 | chr17 | 42998471 | 42998748 | TRUE | OK | 14454.1 | 0.00253 | 0.721 | 0.9264 | 0.040 | 0.020 | 13811.0 | 16012.0 | 13623.7 | 15197.6 | 13729.5 | 14350.8 |
J023 | chr17 | 42998831 | 42999185 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0836 | 0.2797 | NA | NA | NA | 1.0 | 2.1 | 2.0 | 0.0 | 2.0 | 0.0 |
J024 | chr17 | 42998831 | 42999932 | TRUE | OK | 25523.3 | 0.007 | 0.1804 | 0.749 | 0.211 | 0.105 | 24329.8 | 27594.5 | 23589.2 | 26978.1 | 25138.1 | 25510.0 |
J025 | chr17 | 42998831 | 43002672 | TRUE | OK | 115.0 | 0.00222 | 0.2855 | 0.7869 | -0.147 | -0.074 | 109.4 | 156.4 | 100.7 | 111.2 | 101.8 | 110.2 |
J026 | chr17 | 42998912 | 42999932 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.045 | 0.4605 | NA | NA | NA | 2.0 | 2.1 | 1.0 | 3.0 | 3.9 | 1.0 |
J027 | chr17 | 42999292 | 42999932 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.0338 | 0.1444 | NA | NA | NA | 4.9 | 7.3 | 8.1 | 6.9 | 1.0 | 2.9 |
J028 | chr17 | 43000102 | 43002672 | TRUE | OK | 15699.1 | 0.00525 | 0.5685 | 0.8776 | 0.073 | 0.036 | 15286.1 | 17822.2 | 13786.9 | 16419.7 | 14607.9 | 16271.9 |
J029 | chr17 | 43002783 | 43002871 | TRUE | OK | 6930.8 | 0.00445 | 0.6766 | 0.9125 | -0.062 | -0.031 | 6532.3 | 8937.1 | 5908.4 | 6912.8 | 6339.9 | 6954.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000131469.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |