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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr1 | 183555562 | 183555724 | TRUE | OK | 98.3 | 0.00359 | 0.06724 | 0.6585 | -0.295 | -0.147 | 88.7 | 107.4 | 94.7 | 112.2 | 83.2 | 103.5 |
E002 | chr1 | 183555724 | 183556230 | TRUE | OK | 324.9 | 0.00328 | 0.03393 | 0.5696 | -0.275 | -0.137 | 294.8 | 318.0 | 313.2 | 348.5 | 304.6 | 370.3 |
E003 | chr1 | 183560095 | 183560245 | TRUE | OK | 211.2 | 0.00286 | 0.2285 | 0.7684 | -0.157 | -0.078 | 186.4 | 206.5 | 200.4 | 233.3 | 195.9 | 244.6 |
E004 | chr1 | 183560245 | 183560273 | TRUE | OK | 144.7 | 0.00373 | 0.04283 | 0.6029 | -0.300 | -0.150 | 143.0 | 139.7 | 143.0 | 151.9 | 125.3 | 165.3 |
E005 | chr1 | 183563194 | 183563268 | TRUE | OK | 156.1 | 0.00358 | 0.01937 | 0.4864 | -0.339 | -0.169 | 161.7 | 157.5 | 144.0 | 168.8 | 138.1 | 166.3 |
E006 | chr1 | 183563268 | 183563271 | TRUE | OK | 108.2 | 0.00451 | 0.1356 | 0.7269 | -0.246 | -0.123 | 109.4 | 112.6 | 92.7 | 127.1 | 98.9 | 108.3 |
E007 | chr1 | 183563271 | 183563306 | TRUE | OK | 125.0 | 0.0047 | 0.2905 | 0.7888 | -0.171 | -0.086 | 129.2 | 121.0 | 104.8 | 142.0 | 123.4 | 129.6 |
E008 | chr1 | 183563433 | 183563585 | TRUE | OK | 165.1 | 0.00369 | 0.2597 | 0.7791 | -0.164 | -0.082 | 160.7 | 160.6 | 145.0 | 186.6 | 172.4 | 165.3 |
E009 | chr1 | 183563585 | 183564004 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.168 | 0.6068 | NA | NA | NA | 3.0 | 3.1 | 2.0 | 1.0 | 10.8 | 3.9 |
E010 | chr1 | 183564004 | 183564030 | TRUE | OK | 101.3 | 0.0119 | 0.8561 | 0.9647 | 0.035 | 0.018 | 106.5 | 87.6 | 75.5 | 117.1 | 117.5 | 103.5 |
E011 | chr1 | 183564030 | 183564051 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0329 | 0.3362 | NA | NA | NA | 2.0 | 3.1 | 3.0 | 6.0 | 3.9 | 5.8 |
E012 | chr1 | 183565703 | 183565779 | TRUE | OK | 121.6 | 0.00563 | 0.2138 | 0.7628 | 0.216 | 0.108 | 106.5 | 93.8 | 104.8 | 160.8 | 139.1 | 124.7 |
E013 | chr1 | 183566919 | 183566988 | TRUE | OK | 98.6 | 0.0129 | 0.08771 | 0.6863 | 0.389 | 0.194 | 86.8 | 58.4 | 86.6 | 138.0 | 113.6 | 108.3 |
E014 | chr1 | 183567203 | 183567345 | TRUE | OK | 125.2 | 0.00699 | 0.03274 | 0.5644 | 0.390 | 0.195 | 92.7 | 87.6 | 115.8 | 175.7 | 142.0 | 137.3 |
E015 | chr1 | 183569141 | 183569185 | TRUE | OK | 89.2 | 0.0113 | 0.2239 | 0.7664 | 0.274 | 0.137 | 61.1 | 66.7 | 90.7 | 130.1 | 88.1 | 98.6 |
E016 | chr1 | 183569185 | 183569225 | TRUE | OK | 44.5 | 0.0144 | 0.3727 | 0.8143 | -0.247 | -0.124 | 37.5 | 35.5 | 57.4 | 55.6 | 42.1 | 38.7 |
E017 | chr1 | 183570779 | 183570839 | TRUE | OK | 31.3 | 0.0544 | 0.0007141 | 0.1092 | 1.532 | 0.766 | 4.9 | 14.6 | 23.2 | 59.6 | 34.3 | 51.2 |
E018 | chr1 | 183573184 | 183573292 | TRUE | OK | 38.3 | 0.0114 | 9.809e-05 | 0.03072 | 1.071 | 0.535 | 12.8 | 26.1 | 27.2 | 57.6 | 44.1 | 61.9 |
E019 | chr1 | 183574486 | 183574621 | TRUE | OK | 35.3 | 0.00876 | 2.754e-05 | 0.01199 | 1.137 | 0.568 | 16.8 | 22.9 | 19.1 | 61.6 | 37.2 | 54.1 |
E020 | chr1 | 183577598 | 183577707 | TRUE | OK | 22.7 | 0.0192 | 0.0001906 | 0.04832 | 1.370 | 0.685 | 14.8 | 8.3 | 10.1 | 46.7 | 27.4 | 29.0 |
E021 | chr1 | 183586894 | 183586977 | TRUE | OK | 26.0 | 0.0201 | 0.006835 | 0.3367 | 0.933 | 0.466 | 21.7 | 14.6 | 11.1 | 42.7 | 38.2 | 28.0 |
E022 | chr1 | 183590155 | 183590359 | TRUE | OK | 36.3 | 0.0195 | 0.01564 | 0.4537 | 0.768 | 0.384 | 28.6 | 20.9 | 22.2 | 56.6 | 54.8 | 34.8 |
E023 | chr1 | 183590359 | 183590581 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0487 | 0.9727 | NA | NA | NA | 7.9 | 5.2 | 6.0 | 6.0 | 12.7 | 4.8 |
E024 | chr1 | 183590581 | 183590604 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.676 | 0.7297 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 2.9 | 0.0 |
E025 | chr1 | 183590839 | 183590876 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0282 | 0.1238 | NA | NA | NA | 4.9 | 2.1 | 2.0 | 7.9 | 6.9 | 6.8 |
J026 | chr1 | 183556230 | 183560095 | TRUE | OK | 119.0 | 0.00222 | 0.3706 | 0.8137 | 0.128 | 0.064 | 96.6 | 100.1 | 110.8 | 141.0 | 118.5 | 147.0 |
J027 | chr1 | 183560273 | 183563194 | TRUE | OK | 120.5 | 0.0026 | 0.02661 | 0.5346 | -0.320 | -0.160 | 125.2 | 115.7 | 116.8 | 126.1 | 106.7 | 132.5 |
J028 | chr1 | 183563306 | 183563433 | TRUE | OK | 103.3 | 0.00201 | 0.3219 | 0.7985 | -0.144 | -0.072 | 97.6 | 101.1 | 92.7 | 118.1 | 102.8 | 107.3 |
J029 | chr1 | 183563585 | 183564004 | TRUE | OK | 88.8 | 0.0101 | 0.9026 | 0.9768 | -0.031 | -0.015 | 93.7 | 82.4 | 65.5 | 101.3 | 99.9 | 89.9 |
J030 | chr1 | 183564030 | 183565703 | TRUE | OK | 79.3 | 0.00849 | 0.8206 | 0.9553 | 0.047 | 0.023 | 78.9 | 67.8 | 63.5 | 93.3 | 96.0 | 76.4 |
J031 | chr1 | 183565779 | 183566919 | TRUE | OK | 74.5 | 0.009 | 0.1326 | 0.7247 | 0.325 | 0.162 | 64.1 | 48.0 | 66.5 | 103.3 | 89.1 | 76.4 |
J032 | chr1 | 183565779 | 183569141 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0216 | 0.3609 | NA | NA | NA | 3.0 | 6.3 | 5.0 | 4.0 | 3.9 | 3.9 |
J033 | chr1 | 183566988 | 183567203 | TRUE | OK | 72.0 | 0.0116 | 0.112 | 0.7094 | 0.372 | 0.186 | 64.1 | 42.8 | 62.4 | 105.2 | 79.3 | 78.3 |
J034 | chr1 | 183567345 | 183569141 | TRUE | OK | 71.6 | 0.0155 | 0.1017 | 0.6995 | 0.414 | 0.207 | 42.4 | 50.1 | 73.5 | 108.2 | 75.4 | 80.2 |
J035 | chr1 | 183569185 | 183570779 | TRUE | OK | 25.0 | 0.0218 | 4.488e-07 | 0.0004262 | 1.925 | 0.963 | 4.9 | 8.3 | 14.1 | 51.6 | 28.4 | 42.5 |
J036 | chr1 | 183570839 | 183573184 | TRUE | OK | 21.8 | 0.0695 | 0.01839 | 0.4787 | 1.158 | 0.579 | 3.0 | 12.5 | 20.1 | 35.7 | 24.5 | 34.8 |
J037 | chr1 | 183570839 | 183577598 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J038 | chr1 | 183573292 | 183574486 | TRUE | OK | 24.7 | 0.00897 | 0.0005082 | 0.09019 | 1.053 | 0.527 | 10.8 | 18.8 | 13.1 | 33.8 | 28.4 | 43.5 |
J039 | chr1 | 183573292 | 183577598 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J040 | chr1 | 183574621 | 183577598 | TRUE | OK | 14.3 | 0.0403 | 0.005197 | 0.301 | 1.431 | 0.716 | 7.9 | 6.3 | 6.0 | 34.7 | 12.7 | 18.4 |
J041 | chr1 | 183577707 | 183586894 | TRUE | OK | 15.5 | 0.0325 | 0.01659 | 0.4642 | 1.071 | 0.536 | 13.8 | 6.3 | 6.0 | 29.8 | 20.6 | 16.4 |
J042 | chr1 | 183586977 | 183590155 | TRUE | OK | 19.8 | 0.0123 | 0.007404 | 0.3492 | 0.905 | 0.453 | 15.8 | 11.5 | 9.1 | 26.8 | 32.3 | 23.2 |
J043 | chr1 | 183590359 | 183590839 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0253 | 0.3 | NA | NA | NA | 4.9 | 2.1 | 2.0 | 7.9 | 5.9 | 3.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000116701.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |