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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr4 | 89551355 | 89551389 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E002 | chr4 | 89551389 | 89551459 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E003 | chr4 | 89551459 | 89551570 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E004 | chr4 | 89587820 | 89587865 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E005 | chr4 | 89587865 | 89587908 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E006 | chr4 | 89587908 | 89587940 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E007 | chr4 | 89627781 | 89627783 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E008 | chr4 | 89627783 | 89627917 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.9 | 0.24 | 0.1655 | NA | NA | NA | 0.0 | 3.1 | 1.0 | 0.0 | 1.0 | 0.0 |
| E009 | chr4 | 89642416 | 89642520 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E010 | chr4 | 89651115 | 89651194 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E011 | chr4 | 89653270 | 89653385 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E012 | chr4 | 89654580 | 89654661 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E013 | chr4 | 89660213 | 89660355 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.853 | 0.4913 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E014 | chr4 | 89681511 | 89681522 | TRUE | OK | 47.2 | 0.0267 | 0.4274 | 0.8322 | 0.266 | 0.133 | 33.5 | 29.2 | 48.3 | 54.6 | 45.0 | 72.5 |
| E015 | chr4 | 89681522 | 89681684 | TRUE | OK | 220.6 | 0.00586 | 0.008242 | 0.3648 | 0.411 | 0.205 | 182.4 | 150.2 | 164.2 | 252.2 | 270.3 | 304.6 |
| E016 | chr4 | 89684444 | 89686704 | TRUE | OK | 272.7 | 0.056 | 0.03919 | 0.5905 | 0.835 | 0.417 | 226.8 | 104.3 | 192.4 | 248.2 | 415.2 | 449.6 |
| E017 | chr4 | 89691284 | 89691373 | TRUE | OK | 251.8 | 0.00618 | 0.01505 | 0.4487 | 0.388 | 0.194 | 211.0 | 178.3 | 184.3 | 258.1 | 310.4 | 368.4 |
| E018 | chr4 | 89691373 | 89691405 | TRUE | OK | 184.6 | 0.00567 | 0.01715 | 0.4696 | 0.381 | 0.190 | 161.7 | 138.7 | 118.9 | 185.7 | 230.1 | 272.6 |
| E019 | chr4 | 89692414 | 89694130 | TRUE | OK | 588.1 | 0.00382 | 7.446e-05 | 0.02535 | 0.465 | 0.232 | 439.8 | 539.1 | 372.7 | 631.4 | 752.1 | 793.8 |
| E020 | chr4 | 89719825 | 89720172 | TRUE | OK | 150.2 | 0.00409 | 0.8493 | 0.9631 | -0.030 | -0.015 | 135.1 | 159.5 | 102.7 | 142.0 | 165.5 | 196.3 |
| E021 | chr4 | 89720341 | 89720432 | TRUE | OK | 14.8 | 0.0776 | 0.2231 | 0.7661 | 0.594 | 0.297 | 18.7 | 3.1 | 8.1 | 18.9 | 17.6 | 22.2 |
| E022 | chr4 | 89726383 | 89726503 | TRUE | OK | 342.2 | 0.0114 | 3.75e-06 | 0.002513 | -0.902 | -0.451 | 359.9 | 452.5 | 340.4 | 325.6 | 269.3 | 305.5 |
| E023 | chr4 | 89726503 | 89726752 | TRUE | OK | 571.1 | 0.0131 | 6.422e-06 | 0.003822 | -0.924 | -0.461 | 579.8 | 732.0 | 552.0 | 552.0 | 503.3 | 507.6 |
| J024 | chr4 | 89551459 | 89587820 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J025 | chr4 | 89551570 | 89587820 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J026 | chr4 | 89587940 | 89627781 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J027 | chr4 | 89627917 | 89642416 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J028 | chr4 | 89627917 | 89691284 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.9 | 0.191 | 0.1491 | NA | NA | NA | 0.0 | 3.1 | 1.0 | 0.0 | 1.0 | 0.0 |
| J029 | chr4 | 89642520 | 89651115 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J030 | chr4 | 89642520 | 89660213 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J031 | chr4 | 89651194 | 89653270 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J032 | chr4 | 89653385 | 89654580 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J033 | chr4 | 89681684 | 89684444 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0247 | 0.5723 | NA | NA | NA | 3.0 | 2.1 | 3.0 | 5.0 | 3.9 | 4.8 |
| J034 | chr4 | 89681684 | 89691284 | TRUE | OK | 114.7 | 0.00232 | 0.0006463 | 0.1034 | 0.487 | 0.244 | 87.8 | 80.3 | 79.6 | 134.0 | 140.0 | 166.3 |
| J035 | chr4 | 89691405 | 89692414 | TRUE | OK | 59.0 | 0.0212 | 0.007247 | 0.3451 | 0.787 | 0.393 | 47.3 | 24.0 | 39.3 | 73.5 | 74.4 | 95.7 |
| J036 | chr4 | 89691405 | 89719825 | TRUE | OK | 75.4 | 0.0115 | 0.8537 | 0.9641 | -0.049 | -0.024 | 67.0 | 88.6 | 45.3 | 62.5 | 87.2 | 101.5 |
| J037 | chr4 | 89691405 | 89726383 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0709 | 0.1728 | NA | NA | NA | 5.9 | 2.1 | 1.0 | 1.0 | 2.0 | 1.9 |
| J038 | chr4 | 89720432 | 89726383 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.8 | 0.183 | 0.2923 | NA | NA | NA | 10.8 | 0.0 | 4.0 | 6.9 | 9.8 | 15.5 |
| N039 | chr4 | 89681680 | 89691284 | TRUE | OK | 12.9 | 0.0129 | 0.6631 | 0.9085 | 0.182 | 0.091 | 9.9 | 10.4 | 11.1 | 8.9 | 21.5 | 15.5 |
| N040 | chr4 | 89681684 | 89686897 | TRUE | OK | 14.4 | 0.021 | 0.8338 | 0.9589 | 0.085 | 0.042 | 10.8 | 11.5 | 14.1 | 21.8 | 12.7 | 15.5 |
| N041 | chr4 | 89681684 | 89719825 | TRUE | OK | 15.5 | 0.0087 | 0.5506 | 0.872 | 0.206 | 0.103 | 11.8 | 10.4 | 15.1 | 18.9 | 20.6 | 16.4 |
| N042 | chr4 | 89687002 | 89691284 | TRUE | OK | 21.8 | 0.00559 | 0.7016 | 0.9203 | 0.113 | 0.056 | 20.7 | 15.6 | 18.1 | 22.8 | 25.5 | 28.0 |
| N043 | chr4 | 89720073 | 89720272 | TRUE | OK | 10.8 | 0.0215 | 0.03054 | 0.554 | 1.002 | 0.501 | 7.9 | 5.2 | 5.0 | 15.9 | 9.8 | 21.3 |
| N044 | chr4 | 89726638 | 89728458 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.135 | 0.4606 | NA | NA | NA | 10.8 | 4.2 | 11.1 | 2.0 | 15.7 | 7.7 |
| N045 | chr4 | 89726660 | 89729193 | TRUE | OK | 348.5 | 0.0111 | 0.0003149 | 0.06661 | -0.698 | -0.349 | 327.4 | 442.1 | 344.5 | 341.5 | 321.2 | 314.2 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000251095.6 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |