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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr14 | 103697608 | 103697616 | TRUE | OK | 11.7 | 0.0261 | 0.1639 | 0.7411 | 0.625 | 0.313 | 12.8 | 9.4 | 9.1 | 12.9 | 7.8 | 18.4 |
E002 | chr14 | 103697616 | 103697617 | TRUE | OK | 11.1 | 0.0266 | 0.2251 | 0.7668 | 0.559 | 0.280 | 11.8 | 9.4 | 9.1 | 11.9 | 6.9 | 17.4 |
E003 | chr14 | 103697617 | 103698738 | TRUE | OK | 801.7 | 0.00595 | 2.194e-05 | 0.01028 | -0.592 | -0.296 | 922.9 | 1193.9 | 900.5 | 537.1 | 622.8 | 633.3 |
E004 | chr14 | 103698738 | 103698942 | TRUE | OK | 241.0 | 0.00335 | 0.008513 | 0.3691 | -0.327 | -0.163 | 273.1 | 292.0 | 307.2 | 179.7 | 176.3 | 217.5 |
E005 | chr14 | 103698942 | 103699017 | TRUE | OK | 179.1 | 0.00232 | 0.001189 | 0.1457 | -0.393 | -0.197 | 215.9 | 220.0 | 224.6 | 129.1 | 136.1 | 148.9 |
E006 | chr14 | 103699132 | 103699179 | TRUE | OK | 188.6 | 0.00269 | 0.6564 | 0.9064 | -0.053 | -0.026 | 190.3 | 210.6 | 233.7 | 144.9 | 175.3 | 176.9 |
E007 | chr14 | 103699363 | 103699576 | TRUE | OK | 277.7 | 0.00724 | 0.9695 | 0.9927 | -0.016 | -0.008 | 258.3 | 297.2 | 368.6 | 236.3 | 254.6 | 251.4 |
E008 | chr14 | 103700452 | 103700706 | TRUE | OK | 373.0 | 0.0172 | 0.8989 | 0.9758 | -0.061 | -0.030 | 355.9 | 565.2 | 335.4 | 306.8 | 302.6 | 372.2 |
E009 | chr14 | 103702015 | 103702582 | TRUE | OK | 40.3 | 0.00804 | 0.7355 | 0.9313 | -0.083 | -0.041 | 40.4 | 56.3 | 40.3 | 34.7 | 42.1 | 28.0 |
E010 | chr14 | 103703172 | 103703237 | TRUE | OK | 136.8 | 0.0105 | 0.0279 | 0.5419 | -0.449 | -0.225 | 160.7 | 147.0 | 204.5 | 104.2 | 96.0 | 108.3 |
E011 | chr14 | 103703237 | 103703277 | TRUE | OK | 111.0 | 0.00878 | 0.01458 | 0.4441 | -0.479 | -0.240 | 137.1 | 122.0 | 160.1 | 85.4 | 85.2 | 76.4 |
E012 | chr14 | 103703277 | 103703327 | TRUE | OK | 135.5 | 0.00725 | 0.01462 | 0.4446 | -0.434 | -0.217 | 153.8 | 156.4 | 195.4 | 99.3 | 115.6 | 92.8 |
E013 | chr14 | 103703327 | 103703347 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0673 | 0.5568 | NA | NA | NA | 7.9 | 6.3 | 9.1 | 6.0 | 15.7 | 3.9 |
E014 | chr14 | 103704395 | 103706042 | TRUE | OK | 504.7 | 0.00215 | 7.804e-10 | 1.767e-06 | 0.591 | 0.295 | 455.5 | 488.0 | 467.4 | 526.2 | 560.1 | 530.8 |
E015 | chr14 | 103706206 | 103706331 | TRUE | OK | 77.0 | 0.00946 | 0.002269 | 0.2045 | 0.658 | 0.329 | 73.0 | 57.3 | 73.5 | 68.5 | 102.8 | 87.0 |
E016 | chr14 | 103706331 | 103706375 | TRUE | OK | 64.2 | 0.0077 | 2.407e-05 | 0.0109 | 0.898 | 0.449 | 55.2 | 46.9 | 52.4 | 61.6 | 74.4 | 94.7 |
E017 | chr14 | 103707002 | 103707070 | TRUE | OK | 221.1 | 0.003 | 0.3239 | 0.7991 | -0.123 | -0.061 | 227.8 | 257.6 | 273.0 | 191.6 | 193.9 | 182.7 |
E018 | chr14 | 103707070 | 103707102 | TRUE | OK | 220.2 | 0.00432 | 0.7118 | 0.9235 | -0.051 | -0.026 | 215.9 | 251.3 | 273.0 | 183.7 | 217.4 | 179.8 |
E019 | chr14 | 103707102 | 103707215 | TRUE | OK | 302.6 | 0.00228 | 0.572 | 0.8789 | -0.058 | -0.029 | 315.5 | 335.8 | 367.6 | 240.3 | 282.0 | 274.6 |
E020 | chr14 | 103707215 | 103708428 | TRUE | OK | 36.7 | 0.0209 | 0.02825 | 0.5445 | 0.684 | 0.342 | 32.5 | 25.0 | 38.3 | 49.6 | 43.1 | 31.9 |
E021 | chr14 | 103708428 | 103708521 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.0294 | 0.5311 | NA | NA | NA | 9.9 | 3.1 | 8.1 | 7.9 | 6.9 | 6.8 |
E022 | chr14 | 103708521 | 103708529 | TRUE | OK | 240.6 | 0.00182 | 0.6245 | 0.8961 | -0.049 | -0.025 | 259.3 | 271.1 | 278.0 | 193.6 | 224.3 | 217.5 |
E023 | chr14 | 103708529 | 103708571 | TRUE | OK | 275.3 | 0.00263 | 0.729 | 0.9291 | -0.037 | -0.019 | 288.9 | 298.2 | 334.4 | 221.4 | 256.6 | 252.3 |
E024 | chr14 | 103708571 | 103708578 | TRUE | OK | 247.1 | 0.00221 | 0.8546 | 0.9643 | -0.018 | -0.009 | 253.4 | 273.2 | 296.1 | 196.6 | 235.0 | 228.2 |
E025 | chr14 | 103708578 | 103708659 | TRUE | OK | 359.6 | 0.00363 | 0.6158 | 0.8931 | 0.064 | 0.032 | 374.7 | 372.3 | 423.0 | 291.9 | 358.4 | 337.4 |
E026 | chr14 | 103708659 | 103708826 | TRUE | OK | 15.9 | 0.0848 | 0.6264 | 0.8966 | 0.266 | 0.133 | 25.6 | 10.4 | 12.1 | 19.9 | 19.6 | 7.7 |
E027 | chr14 | 103708826 | 103708855 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0475 | 0.005626 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 8.9 | 5.9 | 4.8 |
E028 | chr14 | 103711032 | 103711180 | TRUE | OK | 431.1 | 0.00506 | 0.9549 | 0.9895 | 0.011 | 0.005 | 445.7 | 446.3 | 531.8 | 338.5 | 408.4 | 415.7 |
E029 | chr14 | 103711180 | 103711245 | TRUE | OK | 362.9 | 0.00525 | 0.9902 | 0.9976 | 0.004 | 0.002 | 389.5 | 369.1 | 442.2 | 295.9 | 327.1 | 353.9 |
E030 | chr14 | 103711465 | 103711567 | TRUE | OK | 379.3 | 0.00839 | 0.8851 | 0.9723 | 0.026 | 0.013 | 424.0 | 365.0 | 458.3 | 307.8 | 343.7 | 377.1 |
E031 | chr14 | 103711567 | 103711661 | TRUE | OK | 86.1 | 0.0212 | 0.4893 | 0.8525 | 0.175 | 0.087 | 116.3 | 68.8 | 84.6 | 77.4 | 79.3 | 89.9 |
E032 | chr14 | 103711661 | 103712104 | TRUE | OK | 74.7 | 0.019 | 0.1153 | 0.7125 | 0.445 | 0.222 | 80.9 | 58.4 | 74.5 | 59.6 | 71.5 | 103.5 |
E033 | chr14 | 103712874 | 103712931 | TRUE | OK | 209.8 | 0.00404 | 0.0137 | 0.4348 | 0.341 | 0.170 | 207.1 | 197.1 | 221.6 | 176.7 | 234.0 | 222.4 |
E034 | chr14 | 103712931 | 103712941 | TRUE | OK | 142.4 | 0.00707 | 0.02404 | 0.5195 | 0.394 | 0.197 | 145.9 | 118.9 | 151.1 | 126.1 | 156.7 | 155.7 |
E035 | chr14 | 103712941 | 103712968 | TRUE | OK | 140.0 | 0.00757 | 0.004225 | 0.2739 | 0.510 | 0.255 | 136.1 | 110.5 | 146.0 | 130.1 | 153.7 | 163.4 |
E036 | chr14 | 103714104 | 103714213 | TRUE | OK | 113.3 | 0.0115 | 0.422 | 0.8305 | 0.177 | 0.089 | 124.2 | 98.0 | 133.0 | 88.4 | 107.7 | 128.6 |
E037 | chr14 | 103714213 | 103714250 | TRUE | OK | 55.7 | 0.0162 | 0.7939 | 0.9482 | 0.069 | 0.035 | 66.1 | 46.9 | 67.5 | 53.6 | 42.1 | 58.0 |
E038 | chr14 | 103715423 | 103715443 | TRUE | OK | 61.5 | 0.0172 | 0.8674 | 0.9677 | 0.032 | 0.016 | 67.0 | 49.0 | 85.6 | 53.6 | 53.9 | 59.9 |
E039 | chr14 | 103715443 | 103715451 | TRUE | OK | 32.7 | 0.0123 | 0.8585 | 0.9655 | -0.053 | -0.027 | 34.5 | 29.2 | 46.3 | 29.8 | 31.3 | 25.1 |
E040 | chr14 | 103715451 | 103715459 | TRUE | OK | 16.0 | 0.0105 | 0.3966 | 0.8227 | -0.294 | -0.147 | 14.8 | 20.9 | 22.2 | 13.9 | 12.7 | 11.6 |
E041 | chr14 | 103715459 | 103715483 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.0244 | 0.5171 | NA | NA | NA | 3.9 | 9.4 | 9.1 | 8.9 | 8.8 | 4.8 |
E042 | chr14 | 103715483 | 103715484 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E043 | chr14 | 103715484 | 103715486 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E044 | chr14 | 103715486 | 103715504 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J045 | chr14 | 103699017 | 103699132 | TRUE | OK | 104.0 | 0.00226 | 0.09787 | 0.6966 | -0.233 | -0.116 | 113.4 | 121.0 | 134.0 | 73.5 | 95.0 | 87.0 |
J046 | chr14 | 103699179 | 103699363 | TRUE | OK | 129.0 | 0.00214 | 0.7626 | 0.9391 | -0.038 | -0.019 | 125.2 | 146.0 | 161.2 | 103.3 | 115.6 | 122.8 |
J047 | chr14 | 103699576 | 103703172 | TRUE | OK | 86.9 | 0.0244 | 0.07533 | 0.6713 | -0.539 | -0.269 | 97.6 | 89.7 | 146.0 | 70.5 | 49.9 | 67.7 |
J048 | chr14 | 103699576 | 103715423 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.4928 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J049 | chr14 | 103700706 | 103703172 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0252 | 0.2666 | NA | NA | NA | 6.9 | 7.3 | 6.0 | 7.9 | 3.9 | 12.6 |
J050 | chr14 | 103702582 | 103703172 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.7 | 0.288 | 0.9639 | NA | NA | NA | 3.0 | 8.3 | 1.0 | 3.0 | 6.9 | 0.0 |
J051 | chr14 | 103703327 | 103707002 | TRUE | OK | 99.4 | 0.00246 | 0.0005179 | 0.09087 | -0.513 | -0.257 | 116.3 | 128.3 | 134.0 | 72.5 | 80.3 | 64.8 |
J052 | chr14 | 103706042 | 103706206 | TRUE | OK | 26.7 | 0.0213 | 0.006291 | 0.3253 | 0.918 | 0.459 | 25.6 | 13.6 | 24.2 | 33.8 | 37.2 | 26.1 |
J053 | chr14 | 103706375 | 103707002 | TRUE | OK | 27.7 | 0.0241 | 0.0003685 | 0.07345 | 1.265 | 0.633 | 22.7 | 18.8 | 15.1 | 34.7 | 25.5 | 49.3 |
J054 | chr14 | 103707215 | 103708521 | TRUE | OK | 222.6 | 0.00116 | 0.5992 | 0.8877 | -0.050 | -0.025 | 235.7 | 255.5 | 256.8 | 176.7 | 206.6 | 204.0 |
J055 | chr14 | 103708659 | 103711032 | TRUE | OK | 249.5 | 0.00626 | 0.4541 | 0.8407 | 0.118 | 0.059 | 254.4 | 239.8 | 304.2 | 198.6 | 252.7 | 247.5 |
J056 | chr14 | 103711180 | 103711465 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0141 | 0.5142 | NA | NA | NA | 6.9 | 6.3 | 7.1 | 6.0 | 5.9 | 8.7 |
J057 | chr14 | 103711245 | 103711465 | TRUE | OK | 272.8 | 0.00615 | 0.688 | 0.9161 | -0.059 | -0.029 | 294.8 | 279.4 | 344.5 | 219.4 | 230.1 | 268.8 |
J058 | chr14 | 103711567 | 103712874 | TRUE | OK | 133.8 | 0.00398 | 0.09396 | 0.6924 | 0.255 | 0.127 | 139.0 | 125.1 | 145.0 | 108.2 | 144.0 | 141.2 |
J059 | chr14 | 103711567 | 103715423 | TRUE | OK | 37.6 | 0.0129 | 0.1899 | 0.7539 | 0.349 | 0.175 | 35.5 | 28.2 | 47.3 | 40.7 | 34.3 | 39.6 |
J060 | chr14 | 103711661 | 103715423 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.6 | 0.0579 | 0.5488 | NA | NA | NA | 14.8 | 5.2 | 15.1 | 6.9 | 4.9 | 10.6 |
J061 | chr14 | 103712931 | 103714104 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.114 | 0.7981 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 0.0 | 2.0 | 0.0 |
J062 | chr14 | 103712931 | 103715423 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0198 | 0.1502 | NA | NA | NA | 8.9 | 5.2 | 9.1 | 2.0 | 3.9 | 4.8 |
J063 | chr14 | 103712941 | 103714104 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.192 | 0.9462 | NA | NA | NA | 2.0 | 2.1 | 5.0 | 0.0 | 2.0 | 6.8 |
J064 | chr14 | 103712968 | 103715423 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.087 | 0.1631 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 1.0 | 0.0 | 0.0 |
N065 | chr14 | 103700727 | 103701200 | TRUE | OK | 232.7 | 0.0213 | 0.578 | 0.8808 | -0.178 | -0.089 | 231.7 | 368.1 | 210.5 | 210.5 | 169.4 | 205.9 |
N066 | chr14 | 103706042 | 103707002 | TRUE | OK | 13.5 | 0.054 | 0.7854 | 0.9459 | 0.149 | 0.075 | 14.8 | 18.8 | 9.1 | 19.9 | 10.8 | 7.7 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000126215.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |