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Normalized Counts Table (ENSG00000197774.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr16	1773206	1773325	TRUE	OK	64.1	0.0161	0.0208	0.4978	-0.609	-0.304	87.8	50.1	81.6	40.7	66.6	58.0
E002	chr16	1773325	1773474	TRUE	OK	72.6	0.0207	0.04084	0.5966	-0.586	-0.293	94.7	55.3	96.7	50.6	81.3	57.0
E003	chr16	1773704	1773841	TRUE	OK	114.1	0.0046	0.1043	0.7019	-0.263	-0.132	121.3	97.0	131.9	96.3	110.7	127.6
E004	chr16	1774259	1774352	TRUE	OK	96.6	0.0132	0.06099	0.6496	-0.437	-0.218	113.4	83.4	116.8	85.4	75.4	105.4
E005	chr16	1774944	1775040	TRUE	OK	29.2	0.0683	0.4969	0.8546	-0.283	-0.141	34.5	15.6	40.3	11.9	45.0	28.0
E006	chr16	1775040	1775132	TRUE	OK	97.0	0.0136	0.1272	0.7217	-0.369	-0.184	122.3	71.9	113.8	75.5	97.9	100.6
E007	chr16	1775132	1775208	TRUE	OK	49.2	0.0153	0.01627	0.4613	-0.642	-0.321	61.1	39.6	69.5	27.8	52.9	44.5
E008	chr16	1775208	1775314	TRUE	OK	59.9	0.0127	0.07074	0.6641	-0.448	-0.224	72.0	44.8	78.6	41.7	57.8	64.8
E009	chr16	1775314	1775408	TRUE	OK	138.0	0.0126	0.0462	0.6145	-0.445	-0.222	180.4	112.6	155.1	108.2	127.3	144.1
E010	chr16	1775568	1775684	TRUE	OK	154.9	0.00969	0.08966	0.6889	-0.335	-0.168	186.4	131.4	168.2	132.0	140.0	171.1
E011	chr16	1775796	1775811	TRUE	OK	121.5	0.00808	0.0802	0.6774	-0.330	-0.165	144.0	101.1	136.0	97.3	113.6	137.3
E012	chr16	1775811	1775878	TRUE	OK	135.7	0.012	0.1418	0.731	-0.327	-0.164	168.6	105.3	151.1	112.2	134.2	143.1
E013	chr16	1775878	1775914	TRUE	OK	112.4	0.0203	0.4888	0.8524	-0.220	-0.110	141.0	74.0	124.9	96.3	115.6	122.8
E014	chr16	1775914	1775986	TRUE	OK	144.0	0.0119	0.09948	0.6975	-0.358	-0.179	175.5	110.5	169.2	110.2	147.9	150.8
E015	chr16	1776067	1776311	TRUE	OK	169.9	0.00297	0.008303	0.3659	-0.342	-0.171	191.3	155.4	187.3	131.0	179.2	175.0
E016	chr16	1776311	1776339	TRUE	OK	37.0	0.0117	0.1518	0.7354	-0.382	-0.191	39.4	37.5	41.3	34.7	25.5	43.5
E017	chr16	1776339	1776745	TRUE	OK	199.6	0.00732	0.3215	0.7985	-0.174	-0.087	195.2	168.9	229.6	178.7	188.0	236.9
E018	chr16	1776745	1776860	TRUE	OK	249.1	0.00765	0.3828	0.818	-0.154	-0.077	235.7	262.8	237.7	245.2	235.0	278.4
E019	chr16	1776860	1776962	TRUE	OK	420.7	0.0164	0.687	0.9158	0.065	0.033	334.3	475.5	344.5	429.9	425.0	515.3
E020	chr16	1776962	1777405	TRUE	OK	1189.8	0.011	0.05662	0.6412	0.326	0.163	921.9	1185.6	938.7	1191.3	1429.7	1471.5
E021	chr16	1777405	1778454	TRUE	OK	1279.7	0.00151	8.546e-09	1.404e-05	0.434	0.217	1025.4	1091.7	1068.7	1264.8	1614.8	1612.7
E022	chr16	1778454	1780627	TRUE	OK	1413.9	0.0031	0.3282	0.8004	-0.096	-0.048	1388.3	1246.0	1424.2	1186.4	1564.9	1673.6
E023	chr16	1780627	1781708	TRUE	OK	748.0	0.00208	0.4039	0.8252	0.074	0.037	636.0	727.8	686.9	673.1	895.1	869.2
J024	chr16	1773474	1773704	TRUE	OK	29.6	0.0166	0.3789	0.8165	-0.284	-0.142	38.5	20.9	32.2	27.8	24.5	33.8
J025	chr16	1773841	1774259	TRUE	OK	51.4	0.00455	0.1172	0.7135	-0.314	-0.157	53.2	49.0	58.4	44.7	42.1	60.9
J026	chr16	1774352	1775040	TRUE	OK	55.6	0.0213	0.4749	0.8479	-0.219	-0.109	65.1	40.7	62.4	52.6	43.1	69.6
J027	chr16	1775132	1775314	TRUE	OK	25.8	0.0451	0.4595	0.8427	-0.343	-0.172	37.5	20.9	23.2	31.8	18.6	23.2
J028	chr16	1775408	1775568	TRUE	OK	93.0	0.0122	0.1232	0.7189	-0.344	-0.172	119.3	75.1	98.7	66.5	90.1	108.3
J029	chr16	1775684	1775796	TRUE	OK	108.7	0.00688	0.07013	0.663	-0.331	-0.165	129.2	94.9	116.8	91.3	97.9	121.8
J030	chr16	1775986	1776067	TRUE	OK	115.9	0.00648	0.0531	0.6332	-0.335	-0.167	133.1	95.9	135.0	81.4	120.5	129.6
J031	chr16	1776339	1776745	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0238	0.3725	NA	NA	NA	2.0	5.2	9.1	6.0	7.8	11.6
J032	chr16	1776339	1776860	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0824	0.6791	NA	NA	NA	1.0	0.0	2.0	0.0	2.0	2.9
J033	chr16	1777405	1778454	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0235	0.6915	NA	NA	NA	5.9	4.2	3.0	2.0	4.9	5.8
N034	chr16	1773215	1773704	TRUE	OK	11.5	0.0154	0.5066	0.8581	0.265	0.133	14.8	8.3	6.0	11.9	12.7	15.5
N035	chr16	1777327	1778454	TRUE	OK	10.0	0.0172	0.4549	0.841	-0.333	-0.167	7.9	13.6	10.1	11.9	6.9	9.7
N036	chr16	1777443	1777746	TRUE	OK	243.3	0.00135	7.543e-10	1.718e-06	0.618	0.309	183.4	178.3	177.3	264.1	319.2	337.4
N037	chr16	1777872	1777945	TRUE	OK	236.4	0.00675	8.504e-05	0.02774	0.610	0.305	156.8	168.9	199.4	289.9	307.5	295.9
N038	chr16	1778048	1778133	TRUE	OK	257.9	0.00523	0.001735	0.1774	0.437	0.219	189.3	229.4	196.4	288.9	322.2	321.0
N039	chr16	1778321	1778434	TRUE	OK	160.9	0.0131	0.008285	0.3656	0.551	0.276	120.3	135.6	108.8	209.5	191.9	199.2
N040	chr16	1778612	1781357	TRUE	OK	226.2	0.00842	0.0006968	0.1077	0.577	0.289	170.6	174.1	164.2	284.9	273.2	290.1
N041	chr16	1781495	1781765	TRUE	OK	13.9	0.0678	0.9482	0.9879	-0.103	-0.052	4.9	12.5	23.2	8.9	14.7	19.3
N042	chr16	1781495	1782501	TRUE	OK	146.4	0.0123	0.02239	0.5088	0.462	0.231	137.1	92.8	113.8	173.7	172.4	188.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000197774.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE