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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr7 | 93962761 | 93965409 | TRUE | OK | 50.8 | 0.0166 | 4.6e-07 | 0.0004355 | 1.443 | 0.722 | 25.6 | 28.2 | 31.2 | 53.6 | 82.3 | 84.1 |
E002 | chr7 | 93965409 | 93965687 | TRUE | OK | 10.5 | 0.0424 | 0.01926 | 0.4855 | 1.237 | 0.618 | 7.9 | 3.1 | 8.1 | 9.9 | 13.7 | 20.3 |
E003 | chr7 | 93968354 | 93968390 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.116 | 0.3889 | NA | NA | NA | 4.9 | 1.0 | 11.1 | 6.9 | 8.8 | 8.7 |
E004 | chr7 | 93972382 | 93972494 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.044 | 0.04344 | NA | NA | NA | 3.0 | 1.0 | 4.0 | 4.0 | 9.8 | 6.8 |
E005 | chr7 | 93972494 | 93972574 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.274 | 0.1305 | NA | NA | NA | 4.9 | 1.0 | 0.0 | 2.0 | 12.7 | 4.8 |
E006 | chr7 | 93972574 | 93972663 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.143 | 0.1117 | NA | NA | NA | 5.9 | 1.0 | 1.0 | 4.0 | 11.8 | 4.8 |
E007 | chr7 | 93975903 | 93976100 | TRUE | OK | 9.7 | 0.0985 | 0.04702 | 0.6169 | 1.422 | 0.711 | 5.9 | 2.1 | 8.1 | 7.9 | 23.5 | 10.6 |
E008 | chr7 | 93993244 | 93993259 | TRUE | OK | 15.2 | 0.0125 | 0.1137 | 0.7114 | -0.566 | -0.283 | 14.8 | 22.9 | 17.1 | 7.9 | 12.7 | 15.5 |
E009 | chr7 | 93993259 | 93993272 | TRUE | OK | 22.3 | 0.00801 | 0.02081 | 0.4978 | -0.681 | -0.340 | 25.6 | 33.4 | 24.2 | 12.9 | 19.6 | 18.4 |
E010 | chr7 | 93993272 | 93993910 | TRUE | OK | 592.8 | 0.00369 | 0.4579 | 0.8422 | -0.099 | -0.050 | 578.8 | 757.0 | 503.6 | 570.9 | 574.8 | 571.4 |
E011 | chr7 | 93993910 | 93994351 | TRUE | OK | 816.6 | 0.00485 | 0.7351 | 0.9312 | -0.037 | -0.018 | 836.1 | 910.3 | 747.4 | 864.7 | 766.8 | 774.4 |
E012 | chr7 | 93994351 | 93994385 | TRUE | OK | 449.1 | 0.00379 | 0.3082 | 0.7938 | -0.122 | -0.061 | 471.3 | 530.7 | 402.9 | 472.6 | 397.6 | 419.6 |
E013 | chr7 | 93996030 | 93996264 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0792 | 0.1162 | NA | NA | NA | 13.8 | 9.4 | 3.0 | 4.0 | 2.0 | 5.8 |
E014 | chr7 | 93996264 | 93996321 | TRUE | OK | 587.6 | 0.00425 | 0.3704 | 0.8135 | -0.108 | -0.054 | 627.1 | 671.5 | 527.8 | 605.6 | 526.9 | 566.6 |
E015 | chr7 | 93999169 | 93999294 | TRUE | OK | 804.5 | 0.00136 | 0.3976 | 0.8231 | -0.069 | -0.034 | 795.7 | 935.3 | 741.3 | 800.2 | 761.9 | 792.8 |
E016 | chr7 | 93999657 | 93999719 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.044 | 0.8714 | NA | NA | NA | 3.9 | 4.2 | 2.0 | 2.0 | 5.9 | 2.9 |
E017 | chr7 | 94004197 | 94004329 | TRUE | OK | 527.5 | 0.00189 | 0.7621 | 0.939 | -0.025 | -0.012 | 504.8 | 598.5 | 506.6 | 512.3 | 513.1 | 529.8 |
E018 | chr7 | 94004329 | 94004355 | TRUE | OK | 151.8 | 0.00979 | 0.8611 | 0.9661 | -0.021 | -0.011 | 140.0 | 159.5 | 164.2 | 134.0 | 140.0 | 173.1 |
E019 | chr7 | 94004355 | 94004361 | TRUE | OK | 18.8 | 0.0258 | 0.5549 | 0.8732 | 0.215 | 0.107 | 8.9 | 21.9 | 22.2 | 16.9 | 22.5 | 20.3 |
E020 | chr7 | 94004361 | 94004382 | TRUE | OK | 14.1 | 0.0142 | 0.5345 | 0.8669 | 0.223 | 0.112 | 7.9 | 19.8 | 12.1 | 12.9 | 15.7 | 16.4 |
J021 | chr7 | 93965687 | 93968354 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.116 | 0.7715 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 0.0 | 2.9 | 1.0 |
J022 | chr7 | 93965687 | 93972574 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.5661 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J023 | chr7 | 93972663 | 93975903 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0514 | 0.09933 | NA | NA | NA | 3.0 | 1.0 | 1.0 | 4.0 | 6.9 | 1.9 |
J024 | chr7 | 93976100 | 93994351 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0759 | 0.09198 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 3.0 | 5.9 | 1.0 |
J025 | chr7 | 93976100 | 93996264 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.133 | 0.4936 | NA | NA | NA | 1.0 | 1.0 | 6.0 | 3.0 | 5.9 | 2.9 |
J026 | chr7 | 93993910 | 93994351 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0342 | 0.1831 | NA | NA | NA | 3.0 | 5.2 | 4.0 | 1.0 | 3.9 | 1.0 |
J027 | chr7 | 93994385 | 93996264 | TRUE | OK | 419.5 | 0.00275 | 0.2224 | 0.7657 | -0.132 | -0.066 | 443.7 | 496.3 | 376.7 | 435.8 | 373.1 | 391.6 |
J028 | chr7 | 93996321 | 93999169 | TRUE | OK | 499.6 | 0.00323 | 0.4231 | 0.8308 | -0.091 | -0.045 | 531.5 | 582.9 | 435.1 | 511.3 | 449.5 | 487.3 |
J029 | chr7 | 93999294 | 93999657 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr7 | 93999294 | 94004197 | TRUE | OK | 502.4 | 0.00168 | 0.7931 | 0.948 | -0.020 | -0.010 | 485.1 | 567.2 | 479.4 | 492.4 | 475.9 | 514.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000105829.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |