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Normalized Counts Table (ENSG00000115648.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	237485427	237485670	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.854	0.5998	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E002	chr2	237486266	237486309	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.921	0.3619	NA	NA	NA	0.0	0.0	0.0	3.0	0.0	0.0
E003	chr2	237486408	237486409	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.127	0.09487	NA	NA	NA	0.0	3.1	0.0	5.0	2.0	2.9
E004	chr2	237486409	237486738	TRUE	OK	14.6	0.011	0.1278	0.7221	0.546	0.273	12.8	10.4	13.1	18.9	15.7	16.4
E005	chr2	237487250	237487274	TRUE	OK	74.8	0.0114	0.7123	0.9237	-0.075	-0.038	88.7	71.9	73.5	69.5	57.8	87.0
E006	chr2	237487274	237487275	TRUE	OK	77.1	0.0135	0.5841	0.8827	-0.124	-0.062	95.6	71.9	77.6	71.5	58.8	87.0
E007	chr2	237487275	237487397	TRUE	OK	184.2	0.0171	0.9453	0.987	-0.024	-0.012	219.9	148.1	199.4	184.7	165.5	187.6
E008	chr2	237487397	237487437	TRUE	OK	198.0	0.0121	0.9734	0.9936	-0.009	-0.005	229.7	168.9	208.5	196.6	180.2	204.0
E009	chr2	237493402	237493536	TRUE	OK	315.1	0.0137	0.8731	0.9692	0.032	0.016	348.1	262.8	344.5	291.9	330.0	313.3
E010	chr2	237507248	237507385	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E011	chr2	237510069	237510086	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E012	chr2	237510086	237510281	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E013	chr2	237510281	237510573	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.517	0.7841	NA	NA	NA	0.0	1.0	1.0	4.0	0.0	0.0
E014	chr2	237510573	237510674	TRUE	OK	247.5	0.0135	0.5872	0.8838	0.111	0.055	250.4	200.2	282.0	235.3	270.3	246.5
E015	chr2	237510674	237510711	TRUE	OK	170.6	0.0103	0.8523	0.9638	-0.039	-0.019	182.4	146.0	199.4	160.8	171.4	163.4
E016	chr2	237510711	237510795	TRUE	OK	215.3	0.00735	0.7149	0.9245	0.062	0.031	218.9	189.8	237.7	204.5	230.1	210.8
E017	chr2	237510988	237511050	TRUE	OK	178.6	0.00389	0.8409	0.9609	-0.022	-0.011	178.5	182.5	189.4	145.9	185.1	190.5
E018	chr2	237511050	237511101	TRUE	OK	165.4	0.00311	0.8911	0.9739	0.021	0.010	176.5	174.1	152.1	145.9	173.3	170.2
E019	chr2	237511101	237511622	TRUE	OK	18.0	0.0955	0.4706	0.8463	0.316	0.158	23.7	4.2	21.2	18.9	17.6	22.2
E020	chr2	237518028	237518294	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0786	0.571	NA	NA	NA	2.0	1.0	1.0	1.0	2.9	1.9
E021	chr2	237518294	237518413	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0269	0.3614	NA	NA	NA	4.9	3.1	6.0	5.0	5.9	8.7
E022	chr2	237518413	237518538	TRUE	OK	25.0	0.0143	0.2811	0.7853	0.341	0.170	16.8	24.0	27.2	19.9	35.3	27.1
E023	chr2	237518538	237518572	TRUE	OK	189.0	0.00602	0.4938	0.8537	0.117	0.058	194.2	180.4	183.3	158.8	200.8	216.6
E024	chr2	237518572	237518648	TRUE	OK	245.0	0.00363	0.4074	0.8262	0.112	0.056	244.5	239.8	240.7	215.4	270.3	259.1
E025	chr2	237519909	237519934	TRUE	OK	176.0	0.00273	0.1924	0.7546	0.170	0.085	176.5	165.8	168.2	167.8	192.9	184.7
E026	chr2	237519934	237519978	TRUE	OK	184.2	0.00522	0.2831	0.786	0.164	0.082	199.2	167.9	168.2	179.7	188.0	202.1
E027	chr2	237519978	237520029	TRUE	OK	181.8	0.00727	0.3899	0.8203	0.149	0.074	198.2	160.6	172.2	174.7	178.2	206.9
E028	chr2	237525600	237525673	TRUE	OK	183.9	0.00353	0.7672	0.9404	-0.038	-0.019	201.1	184.6	183.3	177.7	167.5	189.5
E029	chr2	237525673	237525727	TRUE	OK	171.7	0.00822	0.6047	0.8896	-0.088	-0.044	187.3	188.7	163.2	179.7	135.1	176.0
E030	chr2	237525727	237525805	TRUE	OK	166.1	0.00794	0.166	0.7424	-0.239	-0.119	188.3	184.6	172.2	160.8	122.4	168.2
E031	chr2	237527328	237527376	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.0421	0.1111	NA	NA	NA	9.9	4.2	8.1	3.0	2.0	5.8
E032	chr2	237527376	237527434	TRUE	OK	140.2	0.0132	0.2356	0.7709	-0.244	-0.122	153.8	161.6	146.0	138.0	93.0	148.9
E033	chr2	237527434	237527516	TRUE	OK	170.8	0.0171	0.5065	0.858	-0.140	-0.070	173.5	199.2	172.2	185.7	114.6	179.8
E034	chr2	237527516	237527683	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.042	0.4723	NA	NA	NA	3.9	4.2	2.0	6.0	5.9	1.9
E035	chr2	237534563	237534647	TRUE	OK	54.0	0.0086	0.8101	0.9526	0.057	0.029	49.3	54.2	58.4	65.5	45.0	51.2
E036	chr2	237537498	237537725	FALSE	LOW_COUNTS_INDEP_FILTER	6.0	0.0387	0.9614	NA	NA	NA	4.9	10.4	3.0	6.9	6.9	3.9
E037	chr2	237540347	237540446	TRUE	OK	229.5	0.00679	0.2889	0.7881	0.164	0.082	198.2	268.0	202.5	250.2	211.5	246.5
E038	chr2	237540446	237540448	TRUE	OK	172.8	0.00503	0.208	0.7606	0.186	0.093	149.9	197.1	152.1	193.6	166.5	177.9
E039	chr2	237540448	237540533	TRUE	OK	230.4	0.00611	0.2721	0.7829	0.165	0.082	214.0	263.8	193.4	252.2	217.4	241.7
E040	chr2	237540801	237540864	TRUE	OK	197.9	0.0048	0.009029	0.3786	0.380	0.190	181.4	197.1	158.1	234.3	200.8	215.6
E041	chr2	237540864	237540957	TRUE	OK	197.4	0.00576	0.6262	0.8965	0.073	0.036	187.3	231.5	172.2	198.6	176.3	218.5
E042	chr2	237540957	237540959	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.0594	0.1927	NA	NA	NA	5.9	3.1	2.0	2.0	1.0	1.9
E043	chr2	237542566	237542659	TRUE	OK	196.7	0.00825	0.3739	0.8146	-0.169	-0.085	186.4	264.9	181.3	186.6	168.4	192.4
E044	chr2	237545456	237545769	TRUE	OK	46.2	0.0053	4.978e-05	0.01882	0.882	0.441	28.6	34.4	38.3	49.6	63.7	62.8
E045	chr2	237546404	237546605	TRUE	OK	36.5	0.01	0.06601	0.656	0.483	0.241	36.5	28.2	29.2	34.7	51.9	38.7
E046	chr2	237546605	237546683	TRUE	OK	218.6	0.0136	0.3873	0.8194	-0.205	-0.102	193.3	306.6	209.5	188.6	193.9	219.5
E047	chr2	237549220	237549278	TRUE	OK	178.8	0.0108	0.2853	0.7869	-0.213	-0.107	169.6	238.8	174.2	132.0	178.2	179.8
E048	chr2	237552026	237552336	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.062	0.04608	NA	NA	NA	5.9	15.6	10.1	3.0	7.8	1.9
E049	chr2	237552336	237552437	TRUE	OK	226.0	0.00912	0.6116	0.8917	-0.104	-0.052	191.3	294.0	227.6	193.6	223.3	226.2
E050	chr2	237553096	237553231	FALSE	LOW_COUNTS_INDEP_FILTER	5.0	0.127	0.382	NA	NA	NA	4.9	6.3	7.1	8.9	2.0	1.0
E051	chr2	237553565	237553688	TRUE	OK	213.1	0.00486	0.4461	0.8383	-0.115	-0.058	184.4	260.7	229.6	184.7	209.6	209.8
E052	chr2	237553688	237553722	TRUE	OK	161.0	0.00586	0.1585	0.7383	-0.230	-0.115	144.9	207.5	175.3	126.1	152.8	159.5
E053	chr2	237553722	237553724	TRUE	OK	127.5	0.00582	0.06561	0.6556	-0.311	-0.155	122.3	173.1	133.0	97.3	111.6	127.6
E054	chr2	237553724	237553811	TRUE	OK	164.4	0.0127	0.132	0.7243	-0.336	-0.168	157.8	239.8	157.1	130.1	142.0	159.5
E055	chr2	237553811	237553843	TRUE	OK	109.4	0.0126	0.08061	0.6778	-0.410	-0.205	108.5	170.0	99.7	86.4	95.0	96.7
E056	chr2	237553843	237553956	TRUE	OK	105.9	0.0158	0.08752	0.6861	-0.439	-0.219	107.5	167.9	93.7	76.4	94.0	95.7
E057	chr2	237553956	237553991	TRUE	OK	18.8	0.026	0.07847	0.6753	-0.702	-0.351	26.6	31.3	13.1	10.9	15.7	15.5
E058	chr2	237553991	237553993	FALSE	LOW_COUNTS_INDEP_FILTER	7.6	0.0269	0.1405	NA	NA	NA	13.8	9.4	6.0	4.0	6.9	5.8
E059	chr2	237553993	237553994	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0439	0.03631	NA	NA	NA	13.8	7.3	6.0	2.0	3.9	4.8
E060	chr2	237553994	237553996	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.0414	0.06015	NA	NA	NA	11.8	6.3	5.0	2.0	3.9	3.9
E061	chr2	237553996	237555322	TRUE	OK	34.1	0.00831	0.1337	0.7255	-0.379	-0.189	37.5	40.7	39.3	32.8	34.3	20.3
J062	chr2	237485670	237486266	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr2	237486309	237487397	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J064	chr2	237486738	237487397	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0674	0.2965	NA	NA	NA	0.0	1.0	3.0	1.0	2.9	3.9
J065	chr2	237486738	237493402	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.219	0.8616	NA	NA	NA	2.0	0.0	2.0	0.0	1.0	3.9
J066	chr2	237487437	237493402	TRUE	OK	172.0	0.0097	0.756	0.9372	-0.060	-0.030	199.2	150.2	186.3	162.8	158.6	175.0
J067	chr2	237493536	237507248	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J068	chr2	237493536	237510573	TRUE	OK	174.3	0.0165	0.5412	0.8693	0.141	0.070	184.4	133.5	192.4	158.8	201.7	175.0
J069	chr2	237507385	237510573	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J070	chr2	237510281	237510573	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J071	chr2	237510795	237510988	TRUE	OK	136.0	0.00604	0.8178	0.9545	-0.035	-0.017	133.1	128.3	159.1	113.2	140.0	142.1
J072	chr2	237511101	237518538	TRUE	OK	130.6	0.00356	0.6655	0.9091	0.066	0.033	139.0	137.6	114.8	112.2	136.1	144.1
J073	chr2	237518648	237519909	TRUE	OK	160.7	0.00149	0.3403	0.8041	0.113	0.057	153.8	160.6	160.1	152.9	172.4	164.4
J074	chr2	237518648	237525600	TRUE	OK	17.0	0.00773	0.03402	0.5701	-0.688	-0.344	22.7	22.9	18.1	7.9	15.7	14.5
J075	chr2	237520029	237525600	TRUE	OK	125.7	0.00681	0.3745	0.8148	0.157	0.078	133.1	103.2	128.9	126.1	125.3	137.3
J076	chr2	237520029	237540347	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.206	0.2459	NA	NA	NA	0.0	0.0	1.0	0.0	2.9	1.0
J077	chr2	237525805	237527328	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.488	0.2868	NA	NA	NA	7.9	1.0	3.0	0.0	0.0	4.8
J078	chr2	237525805	237527376	TRUE	OK	104.4	0.00872	0.0729	0.6673	-0.344	-0.172	112.4	122.0	119.9	99.3	68.5	104.4
J079	chr2	237525805	237534563	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J080	chr2	237527516	237534563	TRUE	OK	40.8	0.0048	0.771	0.9415	-0.062	-0.031	38.5	41.7	47.3	41.7	31.3	44.5
J081	chr2	237527516	237540347	TRUE	OK	83.8	0.0123	0.7006	0.9201	-0.088	-0.044	74.9	108.4	80.6	88.4	60.7	89.9
J082	chr2	237534647	237537498	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.117	0.2328	NA	NA	NA	0.0	3.1	2.0	6.0	3.9	1.0
J083	chr2	237534647	237540347	TRUE	OK	32.1	0.00539	0.9817	0.9956	-0.005	-0.003	28.6	39.6	30.2	33.8	24.5	35.8
J084	chr2	237540533	237540801	TRUE	OK	163.7	0.00333	0.001442	0.1615	0.434	0.217	144.9	164.7	124.9	191.6	170.4	185.6
J085	chr2	237540533	237542566	TRUE	OK	18.0	0.0334	0.66	0.9075	-0.211	-0.105	17.7	30.2	11.1	13.9	13.7	21.3
J086	chr2	237540957	237542566	TRUE	OK	114.4	0.00634	0.8682	0.968	-0.037	-0.018	98.6	149.1	106.8	109.2	101.8	120.9
J087	chr2	237542659	237545456	TRUE	OK	12.3	0.00964	0.2815	0.7853	0.406	0.203	8.9	10.4	13.1	14.9	15.7	10.6
J088	chr2	237542659	237546605	TRUE	OK	139.2	0.0125	0.2237	0.7664	-0.281	-0.140	135.1	204.4	123.9	119.1	114.6	138.3
J089	chr2	237546683	237549220	TRUE	OK	127.1	0.0103	0.1214	0.7171	-0.326	-0.163	127.2	185.6	115.8	98.3	111.6	123.8
J090	chr2	237549278	237552336	TRUE	OK	140.7	0.0156	0.7341	0.9308	-0.084	-0.042	115.4	183.5	143.0	105.2	147.9	148.9
J091	chr2	237552437	237553096	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0698	0.5175	NA	NA	NA	2.0	1.0	2.0	2.0	1.0	0.0
J092	chr2	237552437	237553565	TRUE	OK	151.9	0.00743	0.7235	0.9272	-0.073	-0.036	124.2	197.1	154.1	132.0	156.7	147.0
J093	chr2	237552437	237553688	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0156	0.1442	NA	NA	NA	5.9	4.2	5.0	6.0	7.8	10.6
J094	chr2	237553231	237553565	FALSE	LOW_COUNTS_INDEP_FILTER	3.4	0.343	0.1765	NA	NA	NA	3.9	4.2	6.0	6.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000115648.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE