Raw Counts Table (ENSG00000115648.14)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr2 | 237485427 | 237485670 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.854 | 0.5998 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E002 | chr2 | 237486266 | 237486309 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.921 | 0.3619 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 |
E003 | chr2 | 237486408 | 237486409 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.127 | 0.09487 | NA | NA | NA | 0.0 | 3.0 | 0.0 | 5.0 | 2.0 | 3.0 |
E004 | chr2 | 237486409 | 237486738 | TRUE | OK | 14.6 | 0.011 | 0.1278 | 0.7221 | 0.546 | 0.273 | 13.0 | 10.0 | 13.0 | 19.0 | 16.0 | 17.0 |
E005 | chr2 | 237487250 | 237487274 | TRUE | OK | 74.8 | 0.0114 | 0.7123 | 0.9237 | -0.075 | -0.038 | 90.0 | 69.0 | 73.0 | 70.0 | 59.0 | 90.0 |
E006 | chr2 | 237487274 | 237487275 | TRUE | OK | 77.1 | 0.0135 | 0.5841 | 0.8827 | -0.124 | -0.062 | 97.0 | 69.0 | 77.0 | 72.0 | 60.0 | 90.0 |
E007 | chr2 | 237487275 | 237487397 | TRUE | OK | 184.2 | 0.0171 | 0.9453 | 0.987 | -0.024 | -0.012 | 223.0 | 142.0 | 198.0 | 186.0 | 169.0 | 194.0 |
E008 | chr2 | 237487397 | 237487437 | TRUE | OK | 198.0 | 0.0121 | 0.9734 | 0.9936 | -0.009 | -0.005 | 233.0 | 162.0 | 207.0 | 198.0 | 184.0 | 211.0 |
E009 | chr2 | 237493402 | 237493536 | TRUE | OK | 315.1 | 0.0137 | 0.8731 | 0.9692 | 0.032 | 0.016 | 353.0 | 252.0 | 342.0 | 294.0 | 337.0 | 324.0 |
E010 | chr2 | 237507248 | 237507385 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E011 | chr2 | 237510069 | 237510086 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E012 | chr2 | 237510086 | 237510281 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E013 | chr2 | 237510281 | 237510573 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.517 | 0.7841 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 4.0 | 0.0 | 0.0 |
E014 | chr2 | 237510573 | 237510674 | TRUE | OK | 247.5 | 0.0135 | 0.5872 | 0.8838 | 0.111 | 0.055 | 254.0 | 192.0 | 280.0 | 237.0 | 276.0 | 255.0 |
E015 | chr2 | 237510674 | 237510711 | TRUE | OK | 170.6 | 0.0103 | 0.8523 | 0.9638 | -0.039 | -0.019 | 185.0 | 140.0 | 198.0 | 162.0 | 175.0 | 169.0 |
E016 | chr2 | 237510711 | 237510795 | TRUE | OK | 215.3 | 0.00735 | 0.7149 | 0.9245 | 0.062 | 0.031 | 222.0 | 182.0 | 236.0 | 206.0 | 235.0 | 218.0 |
E017 | chr2 | 237510988 | 237511050 | TRUE | OK | 178.6 | 0.00389 | 0.8409 | 0.9609 | -0.022 | -0.011 | 181.0 | 175.0 | 188.0 | 147.0 | 189.0 | 197.0 |
E018 | chr2 | 237511050 | 237511101 | TRUE | OK | 165.4 | 0.00311 | 0.8911 | 0.9739 | 0.021 | 0.010 | 179.0 | 167.0 | 151.0 | 147.0 | 177.0 | 176.0 |
E019 | chr2 | 237511101 | 237511622 | TRUE | OK | 18.0 | 0.0955 | 0.4706 | 0.8463 | 0.316 | 0.158 | 24.0 | 4.0 | 21.0 | 19.0 | 18.0 | 23.0 |
E020 | chr2 | 237518028 | 237518294 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.0786 | 0.571 | NA | NA | NA | 2.0 | 1.0 | 1.0 | 1.0 | 3.0 | 2.0 |
E021 | chr2 | 237518294 | 237518413 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0269 | 0.3614 | NA | NA | NA | 5.0 | 3.0 | 6.0 | 5.0 | 6.0 | 9.0 |
E022 | chr2 | 237518413 | 237518538 | TRUE | OK | 25.0 | 0.0143 | 0.2811 | 0.7853 | 0.341 | 0.170 | 17.0 | 23.0 | 27.0 | 20.0 | 36.0 | 28.0 |
E023 | chr2 | 237518538 | 237518572 | TRUE | OK | 189.0 | 0.00602 | 0.4938 | 0.8537 | 0.117 | 0.058 | 197.0 | 173.0 | 182.0 | 160.0 | 205.0 | 224.0 |
E024 | chr2 | 237518572 | 237518648 | TRUE | OK | 245.0 | 0.00363 | 0.4074 | 0.8262 | 0.112 | 0.056 | 248.0 | 230.0 | 239.0 | 217.0 | 276.0 | 268.0 |
E025 | chr2 | 237519909 | 237519934 | TRUE | OK | 176.0 | 0.00273 | 0.1924 | 0.7546 | 0.170 | 0.085 | 179.0 | 159.0 | 167.0 | 169.0 | 197.0 | 191.0 |
E026 | chr2 | 237519934 | 237519978 | TRUE | OK | 184.2 | 0.00522 | 0.2831 | 0.786 | 0.164 | 0.082 | 202.0 | 161.0 | 167.0 | 181.0 | 192.0 | 209.0 |
E027 | chr2 | 237519978 | 237520029 | TRUE | OK | 181.8 | 0.00727 | 0.3899 | 0.8203 | 0.149 | 0.074 | 201.0 | 154.0 | 171.0 | 176.0 | 182.0 | 214.0 |
E028 | chr2 | 237525600 | 237525673 | TRUE | OK | 183.9 | 0.00353 | 0.7672 | 0.9404 | -0.038 | -0.019 | 204.0 | 177.0 | 182.0 | 179.0 | 171.0 | 196.0 |
E029 | chr2 | 237525673 | 237525727 | TRUE | OK | 171.7 | 0.00822 | 0.6047 | 0.8896 | -0.088 | -0.044 | 190.0 | 181.0 | 162.0 | 181.0 | 138.0 | 182.0 |
E030 | chr2 | 237525727 | 237525805 | TRUE | OK | 166.1 | 0.00794 | 0.166 | 0.7424 | -0.239 | -0.119 | 191.0 | 177.0 | 171.0 | 162.0 | 125.0 | 174.0 |
E031 | chr2 | 237527328 | 237527376 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0421 | 0.1111 | NA | NA | NA | 10.0 | 4.0 | 8.0 | 3.0 | 2.0 | 6.0 |
E032 | chr2 | 237527376 | 237527434 | TRUE | OK | 140.2 | 0.0132 | 0.2356 | 0.7709 | -0.244 | -0.122 | 156.0 | 155.0 | 145.0 | 139.0 | 95.0 | 154.0 |
E033 | chr2 | 237527434 | 237527516 | TRUE | OK | 170.8 | 0.0171 | 0.5065 | 0.858 | -0.140 | -0.070 | 176.0 | 191.0 | 171.0 | 187.0 | 117.0 | 186.0 |
E034 | chr2 | 237527516 | 237527683 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.042 | 0.4723 | NA | NA | NA | 4.0 | 4.0 | 2.0 | 6.0 | 6.0 | 2.0 |
E035 | chr2 | 237534563 | 237534647 | TRUE | OK | 54.0 | 0.0086 | 0.8101 | 0.9526 | 0.057 | 0.029 | 50.0 | 52.0 | 58.0 | 66.0 | 46.0 | 53.0 |
E036 | chr2 | 237537498 | 237537725 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0387 | 0.9614 | NA | NA | NA | 5.0 | 10.0 | 3.0 | 7.0 | 7.0 | 4.0 |
E037 | chr2 | 237540347 | 237540446 | TRUE | OK | 229.5 | 0.00679 | 0.2889 | 0.7881 | 0.164 | 0.082 | 201.0 | 257.0 | 201.0 | 252.0 | 216.0 | 255.0 |
E038 | chr2 | 237540446 | 237540448 | TRUE | OK | 172.8 | 0.00503 | 0.208 | 0.7606 | 0.186 | 0.093 | 152.0 | 189.0 | 151.0 | 195.0 | 170.0 | 184.0 |
E039 | chr2 | 237540448 | 237540533 | TRUE | OK | 230.4 | 0.00611 | 0.2721 | 0.7829 | 0.165 | 0.082 | 217.0 | 253.0 | 192.0 | 254.0 | 222.0 | 250.0 |
E040 | chr2 | 237540801 | 237540864 | TRUE | OK | 197.9 | 0.0048 | 0.009029 | 0.3786 | 0.380 | 0.190 | 184.0 | 189.0 | 157.0 | 236.0 | 205.0 | 223.0 |
E041 | chr2 | 237540864 | 237540957 | TRUE | OK | 197.4 | 0.00576 | 0.6262 | 0.8965 | 0.073 | 0.036 | 190.0 | 222.0 | 171.0 | 200.0 | 180.0 | 226.0 |
E042 | chr2 | 237540957 | 237540959 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.0594 | 0.1927 | NA | NA | NA | 6.0 | 3.0 | 2.0 | 2.0 | 1.0 | 2.0 |
E043 | chr2 | 237542566 | 237542659 | TRUE | OK | 196.7 | 0.00825 | 0.3739 | 0.8146 | -0.169 | -0.085 | 189.0 | 254.0 | 180.0 | 188.0 | 172.0 | 199.0 |
E044 | chr2 | 237545456 | 237545769 | TRUE | OK | 46.2 | 0.0053 | 4.978e-05 | 0.01882 | 0.882 | 0.441 | 29.0 | 33.0 | 38.0 | 50.0 | 65.0 | 65.0 |
E045 | chr2 | 237546404 | 237546605 | TRUE | OK | 36.5 | 0.01 | 0.06601 | 0.656 | 0.483 | 0.241 | 37.0 | 27.0 | 29.0 | 35.0 | 53.0 | 40.0 |
E046 | chr2 | 237546605 | 237546683 | TRUE | OK | 218.6 | 0.0136 | 0.3873 | 0.8194 | -0.205 | -0.102 | 196.0 | 294.0 | 208.0 | 190.0 | 198.0 | 227.0 |
E047 | chr2 | 237549220 | 237549278 | TRUE | OK | 178.8 | 0.0108 | 0.2853 | 0.7869 | -0.213 | -0.107 | 172.0 | 229.0 | 173.0 | 133.0 | 182.0 | 186.0 |
E048 | chr2 | 237552026 | 237552336 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.062 | 0.04608 | NA | NA | NA | 6.0 | 15.0 | 10.0 | 3.0 | 8.0 | 2.0 |
E049 | chr2 | 237552336 | 237552437 | TRUE | OK | 226.0 | 0.00912 | 0.6116 | 0.8917 | -0.104 | -0.052 | 194.0 | 282.0 | 226.0 | 195.0 | 228.0 | 234.0 |
E050 | chr2 | 237553096 | 237553231 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.127 | 0.382 | NA | NA | NA | 5.0 | 6.0 | 7.0 | 9.0 | 2.0 | 1.0 |
E051 | chr2 | 237553565 | 237553688 | TRUE | OK | 213.1 | 0.00486 | 0.4461 | 0.8383 | -0.115 | -0.058 | 187.0 | 250.0 | 228.0 | 186.0 | 214.0 | 217.0 |
E052 | chr2 | 237553688 | 237553722 | TRUE | OK | 161.0 | 0.00586 | 0.1585 | 0.7383 | -0.230 | -0.115 | 147.0 | 199.0 | 174.0 | 127.0 | 156.0 | 165.0 |
E053 | chr2 | 237553722 | 237553724 | TRUE | OK | 127.5 | 0.00582 | 0.06561 | 0.6556 | -0.311 | -0.155 | 124.0 | 166.0 | 132.0 | 98.0 | 114.0 | 132.0 |
E054 | chr2 | 237553724 | 237553811 | TRUE | OK | 164.4 | 0.0127 | 0.132 | 0.7243 | -0.336 | -0.168 | 160.0 | 230.0 | 156.0 | 131.0 | 145.0 | 165.0 |
E055 | chr2 | 237553811 | 237553843 | TRUE | OK | 109.4 | 0.0126 | 0.08061 | 0.6778 | -0.410 | -0.205 | 110.0 | 163.0 | 99.0 | 87.0 | 97.0 | 100.0 |
E056 | chr2 | 237553843 | 237553956 | TRUE | OK | 105.9 | 0.0158 | 0.08752 | 0.6861 | -0.439 | -0.219 | 109.0 | 161.0 | 93.0 | 77.0 | 96.0 | 99.0 |
E057 | chr2 | 237553956 | 237553991 | TRUE | OK | 18.8 | 0.026 | 0.07847 | 0.6753 | -0.702 | -0.351 | 27.0 | 30.0 | 13.0 | 11.0 | 16.0 | 16.0 |
E058 | chr2 | 237553991 | 237553993 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0269 | 0.1405 | NA | NA | NA | 14.0 | 9.0 | 6.0 | 4.0 | 7.0 | 6.0 |
E059 | chr2 | 237553993 | 237553994 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0439 | 0.03631 | NA | NA | NA | 14.0 | 7.0 | 6.0 | 2.0 | 4.0 | 5.0 |
E060 | chr2 | 237553994 | 237553996 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0414 | 0.06015 | NA | NA | NA | 12.0 | 6.0 | 5.0 | 2.0 | 4.0 | 4.0 |
E061 | chr2 | 237553996 | 237555322 | TRUE | OK | 34.1 | 0.00831 | 0.1337 | 0.7255 | -0.379 | -0.189 | 38.0 | 39.0 | 39.0 | 33.0 | 35.0 | 21.0 |
J062 | chr2 | 237485670 | 237486266 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J063 | chr2 | 237486309 | 237487397 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J064 | chr2 | 237486738 | 237487397 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0674 | 0.2965 | NA | NA | NA | 0.0 | 1.0 | 3.0 | 1.0 | 3.0 | 4.0 |
J065 | chr2 | 237486738 | 237493402 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.219 | 0.8616 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 0.0 | 1.0 | 4.0 |
J066 | chr2 | 237487437 | 237493402 | TRUE | OK | 172.0 | 0.0097 | 0.756 | 0.9372 | -0.060 | -0.030 | 202.0 | 144.0 | 185.0 | 164.0 | 162.0 | 181.0 |
J067 | chr2 | 237493536 | 237507248 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J068 | chr2 | 237493536 | 237510573 | TRUE | OK | 174.3 | 0.0165 | 0.5412 | 0.8693 | 0.141 | 0.070 | 187.0 | 128.0 | 191.0 | 160.0 | 206.0 | 181.0 |
J069 | chr2 | 237507385 | 237510573 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J070 | chr2 | 237510281 | 237510573 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J071 | chr2 | 237510795 | 237510988 | TRUE | OK | 136.0 | 0.00604 | 0.8178 | 0.9545 | -0.035 | -0.017 | 135.0 | 123.0 | 158.0 | 114.0 | 143.0 | 147.0 |
J072 | chr2 | 237511101 | 237518538 | TRUE | OK | 130.6 | 0.00356 | 0.6655 | 0.9091 | 0.066 | 0.033 | 141.0 | 132.0 | 114.0 | 113.0 | 139.0 | 149.0 |
J073 | chr2 | 237518648 | 237519909 | TRUE | OK | 160.7 | 0.00149 | 0.3403 | 0.8041 | 0.113 | 0.057 | 156.0 | 154.0 | 159.0 | 154.0 | 176.0 | 170.0 |
J074 | chr2 | 237518648 | 237525600 | TRUE | OK | 17.0 | 0.00773 | 0.03402 | 0.5701 | -0.688 | -0.344 | 23.0 | 22.0 | 18.0 | 8.0 | 16.0 | 15.0 |
J075 | chr2 | 237520029 | 237525600 | TRUE | OK | 125.7 | 0.00681 | 0.3745 | 0.8148 | 0.157 | 0.078 | 135.0 | 99.0 | 128.0 | 127.0 | 128.0 | 142.0 |
J076 | chr2 | 237520029 | 237540347 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.206 | 0.2459 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 3.0 | 1.0 |
J077 | chr2 | 237525805 | 237527328 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.488 | 0.2868 | NA | NA | NA | 8.0 | 1.0 | 3.0 | 0.0 | 0.0 | 5.0 |
J078 | chr2 | 237525805 | 237527376 | TRUE | OK | 104.4 | 0.00872 | 0.0729 | 0.6673 | -0.344 | -0.172 | 114.0 | 117.0 | 119.0 | 100.0 | 70.0 | 108.0 |
J079 | chr2 | 237525805 | 237534563 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J080 | chr2 | 237527516 | 237534563 | TRUE | OK | 40.8 | 0.0048 | 0.771 | 0.9415 | -0.062 | -0.031 | 39.0 | 40.0 | 47.0 | 42.0 | 32.0 | 46.0 |
J081 | chr2 | 237527516 | 237540347 | TRUE | OK | 83.8 | 0.0123 | 0.7006 | 0.9201 | -0.088 | -0.044 | 76.0 | 104.0 | 80.0 | 89.0 | 62.0 | 93.0 |
J082 | chr2 | 237534647 | 237537498 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.117 | 0.2328 | NA | NA | NA | 0.0 | 3.0 | 2.0 | 6.0 | 4.0 | 1.0 |
J083 | chr2 | 237534647 | 237540347 | TRUE | OK | 32.1 | 0.00539 | 0.9817 | 0.9956 | -0.005 | -0.003 | 29.0 | 38.0 | 30.0 | 34.0 | 25.0 | 37.0 |
J084 | chr2 | 237540533 | 237540801 | TRUE | OK | 163.7 | 0.00333 | 0.001442 | 0.1615 | 0.434 | 0.217 | 147.0 | 158.0 | 124.0 | 193.0 | 174.0 | 192.0 |
J085 | chr2 | 237540533 | 237542566 | TRUE | OK | 18.0 | 0.0334 | 0.66 | 0.9075 | -0.211 | -0.105 | 18.0 | 29.0 | 11.0 | 14.0 | 14.0 | 22.0 |
J086 | chr2 | 237540957 | 237542566 | TRUE | OK | 114.4 | 0.00634 | 0.8682 | 0.968 | -0.037 | -0.018 | 100.0 | 143.0 | 106.0 | 110.0 | 104.0 | 125.0 |
J087 | chr2 | 237542659 | 237545456 | TRUE | OK | 12.3 | 0.00964 | 0.2815 | 0.7853 | 0.406 | 0.203 | 9.0 | 10.0 | 13.0 | 15.0 | 16.0 | 11.0 |
J088 | chr2 | 237542659 | 237546605 | TRUE | OK | 139.2 | 0.0125 | 0.2237 | 0.7664 | -0.281 | -0.140 | 137.0 | 196.0 | 123.0 | 120.0 | 117.0 | 143.0 |
J089 | chr2 | 237546683 | 237549220 | TRUE | OK | 127.1 | 0.0103 | 0.1214 | 0.7171 | -0.326 | -0.163 | 129.0 | 178.0 | 115.0 | 99.0 | 114.0 | 128.0 |
J090 | chr2 | 237549278 | 237552336 | TRUE | OK | 140.7 | 0.0156 | 0.7341 | 0.9308 | -0.084 | -0.042 | 117.0 | 176.0 | 142.0 | 106.0 | 151.0 | 154.0 |
J091 | chr2 | 237552437 | 237553096 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0698 | 0.5175 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 2.0 | 1.0 | 0.0 |
J092 | chr2 | 237552437 | 237553565 | TRUE | OK | 151.9 | 0.00743 | 0.7235 | 0.9272 | -0.073 | -0.036 | 126.0 | 189.0 | 153.0 | 133.0 | 160.0 | 152.0 |
J093 | chr2 | 237552437 | 237553688 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0156 | 0.1442 | NA | NA | NA | 6.0 | 4.0 | 5.0 | 6.0 | 8.0 | 11.0 |
J094 | chr2 | 237553231 | 237553565 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.4 | 0.343 | 0.1765 | NA | NA | NA | 4.0 | 4.0 | 6.0 | 6.0 | 0.0 | 0.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|