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Normalized Counts Table (ENSG00000089351.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr19	34994783	34994825	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E002	chr19	34995993	34996291	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.857	0.6511	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
E003	chr19	34999386	34999436	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0648	0.9651	NA	NA	NA	2.0	1.0	3.0	1.0	2.9	2.9
E004	chr19	35000286	35000322	TRUE	OK	14.7	0.246	0.218	0.7642	-0.777	-0.389	12.8	19.8	21.2	17.9	16.6	0.0
E005	chr19	35000322	35000371	TRUE	OK	122.9	0.535	0.394	0.822	-0.489	-0.244	136.1	127.2	148.1	159.8	159.6	6.8
E006	chr19	35000371	35000425	TRUE	OK	153.5	0.117	0.3105	0.7945	-0.350	-0.175	165.6	147.0	179.3	186.6	202.7	39.6
E007	chr19	35000425	35000455	TRUE	OK	181.5	0.0732	0.4876	0.852	-0.169	-0.084	189.3	163.7	196.4	230.3	238.0	71.5
E008	chr19	35000455	35000486	TRUE	OK	224.8	0.0427	0.6181	0.8939	-0.097	-0.048	232.7	193.9	237.7	276.0	286.9	121.8
E009	chr19	35001139	35001244	TRUE	OK	27.0	0.0101	0.8646	0.9671	0.053	0.026	27.6	26.1	22.2	20.8	31.3	33.8
E010	chr19	35002421	35002543	TRUE	OK	17.9	0.00919	0.6993	0.9197	-0.126	-0.063	14.8	21.9	17.1	16.9	17.6	19.3
E011	chr19	35002744	35002825	TRUE	OK	15.5	0.0178	0.3809	0.8173	-0.335	-0.168	19.7	20.9	9.1	13.9	15.7	13.5
E012	chr19	35009118	35009329	TRUE	OK	461.0	0.0118	0.6182	0.8939	-0.080	-0.040	471.3	412.9	467.4	518.2	522.0	374.2
E013	chr19	35009422	35009443	TRUE	OK	249.2	0.00403	0.9554	0.9896	0.008	0.004	250.4	226.3	234.7	266.1	261.5	256.2
E014	chr19	35009443	35009445	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.206	0.09992	NA	NA	NA	2.0	0.0	0.0	6.0	1.0	2.9
E015	chr19	35009672	35009887	FALSE	LOW_COUNTS_INDEP_FILTER	6.7	0.023	0.9502	NA	NA	NA	4.9	9.4	5.0	7.9	7.8	4.8
E016	chr19	35009887	35009972	TRUE	OK	393.8	0.00234	0.5489	0.8717	-0.059	-0.029	393.4	388.9	365.6	400.1	439.7	375.1
E017	chr19	35010091	35010195	TRUE	OK	394.6	0.00189	0.6805	0.9137	-0.038	-0.019	386.5	387.9	368.6	400.1	433.8	390.6
E018	chr19	35010283	35010339	TRUE	OK	415.3	0.00117	0.7836	0.9453	0.023	0.012	369.8	422.3	388.8	426.9	462.2	421.5
E019	chr19	35010339	35010379	TRUE	OK	390.5	0.00236	0.8168	0.9543	-0.028	-0.014	340.2	428.6	359.6	398.1	413.3	403.2
E020	chr19	35010379	35010478	TRUE	OK	158.2	0.0181	0.2123	0.7624	-0.348	-0.174	125.2	236.7	145.0	157.9	144.9	139.2
E021	chr19	35010478	35010639	TRUE	OK	111.4	0.0265	0.4052	0.8255	-0.311	-0.155	84.8	177.3	91.7	114.2	100.9	99.6
E022	chr19	35011473	35011483	TRUE	OK	198.4	0.00335	0.7159	0.9248	0.048	0.024	190.3	174.1	194.4	206.5	215.4	209.8
E023	chr19	35011483	35011554	TRUE	OK	243.6	0.00359	0.7505	0.9354	-0.040	-0.020	242.6	225.2	238.7	246.2	253.6	255.2
E024	chr19	35012987	35013255	TRUE	OK	35.4	0.0196	0.6795	0.9134	-0.143	-0.071	31.6	49.0	26.2	32.8	30.4	42.5
E025	chr19	35013255	35013368	TRUE	OK	279.7	0.00195	0.091	0.6899	0.179	0.090	252.4	247.1	254.8	301.8	326.1	295.9
E026	chr19	35013368	35013540	TRUE	OK	37.6	0.019	0.5776	0.8806	-0.184	-0.092	22.7	46.9	45.3	29.8	44.1	36.7
E027	chr19	35013540	35013584	TRUE	OK	229.5	0.0039	0.02788	0.5419	0.294	0.147	211.0	198.1	184.3	239.3	285.0	259.1
E028	chr19	35013584	35013606	TRUE	OK	215.7	0.0036	0.02748	0.5401	0.292	0.146	195.2	186.6	176.3	221.4	271.3	243.6
E029	chr19	35013606	35013691	TRUE	OK	280.0	0.00215	0.005096	0.2989	0.304	0.152	237.6	241.9	243.7	294.9	348.6	313.3
E030	chr19	35014188	35014365	TRUE	OK	338.1	0.0038	0.2604	0.7793	0.143	0.072	292.8	294.0	337.4	367.3	410.3	326.8
E031	chr19	35014365	35014387	TRUE	OK	172.8	0.00294	0.1688	0.7438	0.182	0.091	150.9	149.1	164.2	199.6	206.6	166.3
E032	chr19	35014387	35014879	TRUE	OK	20.9	0.0276	0.3223	0.7987	0.400	0.200	18.7	14.6	18.1	14.9	26.4	32.9
E033	chr19	35014968	35015823	TRUE	OK	43.8	0.0292	0.0913	0.6902	0.586	0.293	32.5	25.0	42.3	39.7	52.9	70.6
E034	chr19	35015823	35015967	TRUE	OK	287.8	0.00659	0.5812	0.8816	0.092	0.046	267.2	245.0	287.1	327.6	340.8	259.1
E035	chr19	35019190	35019309	TRUE	OK	277.7	0.00263	0.8218	0.9556	0.027	0.014	251.4	254.4	282.0	303.8	306.5	267.8
E036	chr19	35019390	35019533	TRUE	OK	320.1	0.00274	0.5739	0.8794	-0.064	-0.032	283.0	324.3	328.4	307.8	336.9	340.3
E037	chr19	35021501	35021605	TRUE	OK	356.8	0.00612	0.9027	0.9768	0.018	0.009	327.4	339.9	348.5	361.4	354.5	409.0
E038	chr19	35021690	35021864	TRUE	OK	442.8	0.00501	0.5236	0.8633	0.084	0.042	401.3	428.6	405.9	464.6	451.4	504.7
E039	chr19	35021950	35022038	TRUE	OK	327.1	0.00445	0.4689	0.8457	0.092	0.046	302.7	334.7	272.0	368.3	339.8	345.2
E040	chr19	35022899	35022911	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.281	0.5381	NA	NA	NA	4.9	4.2	0.0	0.0	2.0	3.9
E041	chr19	35023235	35023297	TRUE	OK	317.1	0.00353	0.2114	0.7621	0.149	0.075	285.9	319.1	259.9	353.4	340.8	343.2
E042	chr19	35023297	35023343	TRUE	OK	291.2	0.00483	0.57	0.8781	0.069	0.035	242.6	325.3	247.8	309.8	307.5	314.2
E043	chr19	35023426	35023547	TRUE	OK	328.7	0.00211	0.9543	0.9894	0.003	0.002	285.9	358.7	296.1	334.6	359.4	337.4
E044	chr19	35023547	35023830	TRUE	OK	15.3	0.0406	0.5003	0.8557	0.295	0.147	12.8	7.3	19.1	14.9	14.7	23.2
E045	chr19	35026048	35026469	TRUE	OK	282.0	0.00923	0.7556	0.937	-0.077	-0.038	222.8	354.5	250.8	289.9	293.8	280.4
E046	chr19	35026469	35026471	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.164	0.664	NA	NA	NA	5.9	4.2	0.0	1.0	2.9	3.9
J047	chr19	34994825	34995993	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J048	chr19	34996291	35009118	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.617	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J049	chr19	34999436	35009118	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0444	0.9629	NA	NA	NA	2.0	1.0	3.0	1.0	2.9	2.9
J050	chr19	35000486	35002421	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.148	0.299	NA	NA	NA	1.0	2.1	0.0	0.0	1.0	0.0
J051	chr19	35000486	35009118	TRUE	OK	189.7	0.0346	0.8852	0.9723	0.005	0.003	190.3	151.2	200.4	231.3	245.8	118.9
J052	chr19	35001244	35009118	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0436	0.06701	NA	NA	NA	2.0	3.1	4.0	1.0	1.0	1.0
J053	chr19	35002543	35002744	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.556	0.3077	NA	NA	NA	0.0	2.1	0.0	0.0	0.0	0.0
J054	chr19	35002825	35009118	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.556	0.3077	NA	NA	NA	0.0	2.1	0.0	0.0	0.0	0.0
J055	chr19	35009329	35009422	TRUE	OK	231.1	0.0049	0.9179	0.9807	-0.014	-0.007	239.6	206.5	218.6	246.2	239.9	235.9
J056	chr19	35009329	35009887	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.102	0.8885	NA	NA	NA	0.0	2.1	1.0	1.0	2.0	0.0
J057	chr19	35009443	35009887	TRUE	OK	227.3	0.00199	0.9516	0.9888	0.009	0.004	224.8	208.5	215.5	237.3	248.7	229.1
J058	chr19	35009972	35010091	TRUE	OK	252.2	0.0016	0.1466	0.7333	-0.147	-0.073	254.4	269.0	233.7	243.2	280.1	233.0
J059	chr19	35010195	35010283	TRUE	OK	294.2	0.00168	0.2116	0.7621	0.126	0.063	278.1	276.3	253.8	309.8	335.9	311.3
J060	chr19	35010379	35011473	TRUE	OK	178.4	0.00341	0.7196	0.926	0.049	0.024	174.5	153.3	174.2	186.6	192.9	188.5
J061	chr19	35011554	35013255	TRUE	OK	170.0	0.00656	0.7853	0.9459	-0.045	-0.022	171.6	150.2	172.2	175.7	164.5	185.6
J062	chr19	35011554	35013540	TRUE	OK	10.5	0.0159	0.03632	0.5802	-0.883	-0.441	12.8	15.6	11.1	3.0	11.8	8.7
J063	chr19	35013368	35013540	TRUE	OK	154.9	0.00245	4.996e-05	0.01887	0.526	0.263	129.2	126.2	109.8	173.7	212.5	177.9
J064	chr19	35013691	35014188	TRUE	OK	177.8	0.00169	0.0791	0.6757	0.203	0.101	150.9	152.2	171.2	191.6	215.4	185.6
J065	chr19	35014387	35015823	TRUE	OK	152.9	0.00181	0.08013	0.6774	0.215	0.107	128.2	134.5	143.0	174.7	188.0	148.9
J066	chr19	35015967	35019190	TRUE	OK	158.7	0.0132	0.7883	0.9465	0.065	0.033	154.8	123.0	166.2	186.6	188.0	133.4
J067	chr19	35019309	35019390	TRUE	OK	171.6	0.00273	0.7713	0.9416	-0.039	-0.019	147.9	164.7	185.3	173.7	177.2	180.8
J068	chr19	35019533	35021501	TRUE	OK	205.1	0.00481	0.947	0.9875	-0.010	-0.005	185.4	209.6	194.4	198.6	204.7	237.8
J069	chr19	35021605	35021690	TRUE	OK	245.8	0.0075	0.6995	0.9197	0.066	0.033	226.8	223.1	238.7	250.2	242.9	293.0
J070	chr19	35021864	35021950	TRUE	OK	226.5	0.00294	0.7563	0.9372	0.036	0.018	204.1	235.7	201.4	241.2	228.2	248.5
J071	chr19	35022038	35022899	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.172	0.5277	NA	NA	NA	1.0	1.0	0.0	0.0	0.0	1.0
J072	chr19	35022038	35023235	TRUE	OK	228.8	0.00681	0.1093	0.7073	0.257	0.128	213.0	205.4	181.3	283.9	238.9	250.4
J073	chr19	35022911	35023235	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.149	0.3023	NA	NA	NA	1.0	2.1	0.0	0.0	0.0	1.0
J074	chr19	35023343	35023426	TRUE	OK	215.0	0.00497	0.8611	0.9661	-0.034	-0.017	177.5	249.2	196.4	222.4	214.5	230.1
J075	chr19	35023547	35026048	TRUE	OK	180.4	0.00404	0.8858	0.9725	0.015	0.007	150.9	210.6	153.1	177.7	207.6	182.7
N076	chr19	35000486	35005684	TRUE	OK	12.9	0.109	0.3712	0.8139	-0.441	-0.220	13.8	17.7	11.1	17.9	14.7	1.9
N077	chr19	35005550	35005684	TRUE	OK	14.3	0.0244	0.06979	0.6624	0.752	0.376	8.9	6.3	15.1	12.9	21.5	21.3
N078	chr19	35005931	35009118	TRUE	OK	29.5	0.00638	0.7478	0.9346	0.083	0.041	25.6	27.1	29.2	27.8	28.4	38.7

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000089351.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE