Raw Counts Table (ENSG00000111906.17)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr6 | 125219961 | 125220152 | TRUE | OK | 764.4 | 0.00516 | 0.0862 | 0.6847 | 0.229 | 0.115 | 811.0 | 737.0 | 717.0 | 830.0 | 747.0 | 766.0 |
E002 | chr6 | 125221844 | 125221927 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E003 | chr6 | 125221927 | 125221983 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E004 | chr6 | 125234345 | 125234413 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E005 | chr6 | 125265181 | 125265352 | TRUE | OK | 12.3 | 0.0533 | 0.4213 | 0.8303 | 0.460 | 0.230 | 14.0 | 8.0 | 11.0 | 19.0 | 16.0 | 6.0 |
E006 | chr6 | 125275349 | 125275881 | TRUE | OK | 59.3 | 0.00532 | 0.1254 | 0.7205 | 0.306 | 0.153 | 63.0 | 51.0 | 55.0 | 58.0 | 62.0 | 69.0 |
E007 | chr6 | 125275881 | 125275885 | TRUE | OK | 34.8 | 0.007 | 0.9066 | 0.9778 | -0.025 | -0.012 | 42.0 | 38.0 | 31.0 | 28.0 | 31.0 | 40.0 |
E008 | chr6 | 125275885 | 125276162 | TRUE | OK | 1363.6 | 0.00508 | 0.1436 | 0.7319 | -0.199 | -0.100 | 1398.0 | 1809.0 | 1279.0 | 1212.0 | 1231.0 | 1262.0 |
E009 | chr6 | 125276162 | 125276217 | TRUE | OK | 1068.3 | 0.00113 | 0.416 | 0.829 | -0.058 | -0.029 | 1129.0 | 1273.0 | 1014.0 | 1025.0 | 982.0 | 1002.0 |
E010 | chr6 | 125276217 | 125276243 | TRUE | OK | 1072.5 | 0.00104 | 0.3874 | 0.8194 | -0.058 | -0.029 | 1132.0 | 1268.0 | 1030.0 | 1042.0 | 974.0 | 1004.0 |
E011 | chr6 | 125276243 | 125276954 | TRUE | OK | 93.7 | 0.0145 | 0.6136 | 0.8924 | -0.135 | -0.067 | 77.0 | 132.0 | 98.0 | 74.0 | 102.0 | 79.0 |
E012 | chr6 | 125276954 | 125277078 | TRUE | OK | 20.6 | 0.012 | 0.884 | 0.9721 | 0.047 | 0.023 | 21.0 | 26.0 | 17.0 | 14.0 | 26.0 | 20.0 |
E013 | chr6 | 125277078 | 125277101 | TRUE | OK | 31.2 | 0.00568 | 0.6606 | 0.9077 | 0.111 | 0.055 | 30.0 | 34.0 | 31.0 | 31.0 | 33.0 | 29.0 |
E014 | chr6 | 125277101 | 125277240 | TRUE | OK | 1803.9 | 0.00119 | 0.3163 | 0.7963 | -0.068 | -0.034 | 1892.0 | 2119.0 | 1751.0 | 1723.0 | 1602.0 | 1764.0 |
E015 | chr6 | 125277240 | 125279414 | TRUE | OK | 13.0 | 0.0122 | 0.04135 | 0.5987 | 0.774 | 0.387 | 12.0 | 10.0 | 9.0 | 14.0 | 15.0 | 19.0 |
E016 | chr6 | 125292840 | 125292909 | TRUE | OK | 1596.3 | 0.00254 | 0.9959 | 0.999 | 0.005 | 0.002 | 1672.0 | 1805.0 | 1552.0 | 1555.0 | 1399.0 | 1624.0 |
E017 | chr6 | 125292909 | 125293231 | TRUE | OK | 30.5 | 0.0195 | 0.2013 | 0.7585 | -0.386 | -0.193 | 37.0 | 33.0 | 38.0 | 31.0 | 29.0 | 15.0 |
E018 | chr6 | 125297486 | 125297569 | TRUE | OK | 15.2 | 0.0466 | 0.1622 | 0.7401 | 0.652 | 0.326 | 13.0 | 6.0 | 19.0 | 17.0 | 15.0 | 22.0 |
E019 | chr6 | 125298649 | 125298713 | TRUE | OK | 19.9 | 0.00839 | 0.8542 | 0.9642 | -0.052 | -0.026 | 23.0 | 22.0 | 19.0 | 17.0 | 17.0 | 22.0 |
E020 | chr6 | 125298713 | 125298816 | TRUE | OK | 1150.8 | 0.00241 | 0.3123 | 0.795 | 0.099 | 0.049 | 1193.0 | 1231.0 | 1120.0 | 1154.0 | 1045.0 | 1187.0 |
E021 | chr6 | 125300276 | 125300537 | TRUE | OK | 20.2 | 0.0392 | 0.9816 | 0.9956 | 0.022 | 0.011 | 15.0 | 23.0 | 25.0 | 29.0 | 18.0 | 11.0 |
E022 | chr6 | 125300537 | 125300659 | TRUE | OK | 1679.1 | 0.00243 | 0.4031 | 0.825 | 0.083 | 0.041 | 1739.0 | 1800.0 | 1669.0 | 1672.0 | 1561.0 | 1669.0 |
E023 | chr6 | 125301848 | 125301937 | TRUE | OK | 668.0 | 0.00456 | 0.3554 | 0.8092 | 0.121 | 0.061 | 707.0 | 657.0 | 675.0 | 653.0 | 655.0 | 679.0 |
E024 | chr6 | 125301937 | 125301958 | TRUE | OK | 281.3 | 0.00422 | 0.2555 | 0.7776 | 0.154 | 0.077 | 303.0 | 274.0 | 270.0 | 275.0 | 295.0 | 279.0 |
E025 | chr6 | 125301958 | 125301974 | TRUE | OK | 160.1 | 0.00285 | 0.3337 | 0.802 | 0.130 | 0.065 | 173.0 | 164.0 | 148.0 | 158.0 | 149.0 | 173.0 |
E026 | chr6 | 125301974 | 125301975 | TRUE | OK | 67.1 | 0.0126 | 0.5054 | 0.8575 | -0.163 | -0.082 | 90.0 | 79.0 | 54.0 | 54.0 | 55.0 | 72.0 |
E027 | chr6 | 125301975 | 125302072 | TRUE | OK | 106.4 | 0.0211 | 0.6262 | 0.8965 | 0.133 | 0.067 | 129.0 | 117.0 | 76.0 | 95.0 | 86.0 | 139.0 |
E028 | chr6 | 125302072 | 125302078 | TRUE | OK | 15.3 | 0.0405 | 0.07824 | 0.6751 | 0.806 | 0.403 | 17.0 | 13.0 | 6.0 | 17.0 | 13.0 | 27.0 |
J029 | chr6 | 125220152 | 125221844 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr6 | 125221983 | 125234345 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J031 | chr6 | 125234413 | 125265181 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J032 | chr6 | 125234413 | 125277101 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J033 | chr6 | 125265352 | 125276162 | TRUE | OK | 11.9 | 0.0569 | 0.3418 | 0.8046 | 0.551 | 0.276 | 13.0 | 7.0 | 11.0 | 19.0 | 16.0 | 6.0 |
J034 | chr6 | 125276243 | 125277101 | TRUE | OK | 964.2 | 0.000554 | 0.4158 | 0.829 | -0.047 | -0.023 | 1007.0 | 1136.0 | 933.0 | 935.0 | 877.0 | 911.0 |
J035 | chr6 | 125277240 | 125292840 | TRUE | OK | 1046.9 | 0.00272 | 0.4847 | 0.851 | -0.063 | -0.032 | 1126.0 | 1214.0 | 1014.0 | 993.0 | 883.0 | 1069.0 |
J036 | chr6 | 125277240 | 125298649 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J037 | chr6 | 125292909 | 125298713 | TRUE | OK | 719.9 | 0.0019 | 0.4601 | 0.8429 | 0.068 | 0.034 | 750.0 | 797.0 | 682.0 | 693.0 | 647.0 | 766.0 |
J038 | chr6 | 125292909 | 125300537 | TRUE | OK | 531.8 | 0.00164 | 0.4569 | 0.8418 | -0.060 | -0.030 | 557.0 | 611.0 | 538.0 | 512.0 | 445.0 | 536.0 |
J039 | chr6 | 125297569 | 125298713 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.157 | 0.07877 | NA | NA | NA | 4.0 | 0.0 | 0.0 | 3.0 | 4.0 | 5.0 |
J040 | chr6 | 125298816 | 125300537 | TRUE | OK | 804.5 | 0.00194 | 0.2258 | 0.7673 | 0.111 | 0.056 | 820.0 | 846.0 | 797.0 | 821.0 | 736.0 | 825.0 |
J041 | chr6 | 125300659 | 125301848 | TRUE | OK | 655.2 | 0.00451 | 0.2696 | 0.7822 | 0.143 | 0.072 | 686.0 | 638.0 | 663.0 | 639.0 | 648.0 | 675.0 |
N042 | chr6 | 125153970 | 125220077 | TRUE | OK | 452.3 | 0.0106 | 0.2521 | 0.776 | 0.218 | 0.109 | 488.0 | 394.0 | 457.0 | 505.0 | 424.0 | 460.0 |
N043 | chr6 | 125154532 | 125220077 | TRUE | OK | 19.5 | 0.00658 | 0.4291 | 0.8327 | 0.240 | 0.120 | 23.0 | 18.0 | 16.0 | 18.0 | 20.0 | 23.0 |
N044 | chr6 | 125220193 | 125229117 | TRUE | OK | 795.2 | 0.00183 | 0.06142 | 0.65 | 0.164 | 0.082 | 824.0 | 827.0 | 748.0 | 837.0 | 753.0 | 801.0 |
N045 | chr6 | 125229266 | 125248281 | TRUE | OK | 764.7 | 0.00542 | 0.01042 | 0.3975 | 0.343 | 0.172 | 798.0 | 702.0 | 692.0 | 796.0 | 789.0 | 837.0 |
N046 | chr6 | 125248383 | 125253716 | TRUE | OK | 277.6 | 0.00146 | 4.984e-06 | 0.003163 | 0.442 | 0.221 | 243.0 | 294.0 | 220.0 | 325.0 | 296.0 | 295.0 |
N047 | chr6 | 125248383 | 125257097 | TRUE | OK | 43.8 | 0.00553 | 0.1665 | 0.7426 | 0.296 | 0.148 | 44.0 | 53.0 | 28.0 | 46.0 | 42.0 | 51.0 |
N048 | chr6 | 125248383 | 125262833 | TRUE | OK | 410.1 | 0.00155 | 0.01781 | 0.4744 | 0.215 | 0.108 | 419.0 | 421.0 | 372.0 | 401.0 | 422.0 | 437.0 |
N049 | chr6 | 125253755 | 125257097 | TRUE | OK | 170.7 | 0.00155 | 0.0002693 | 0.06062 | 0.411 | 0.206 | 153.0 | 183.0 | 133.0 | 196.0 | 179.0 | 185.0 |
N050 | chr6 | 125253755 | 125262833 | TRUE | OK | 70.1 | 0.00267 | 0.06218 | 0.6507 | 0.309 | 0.154 | 59.0 | 79.0 | 61.0 | 72.0 | 80.0 | 71.0 |
N051 | chr6 | 125257158 | 125262833 | TRUE | OK | 235.4 | 0.00587 | 0.01658 | 0.4642 | 0.357 | 0.178 | 246.0 | 242.0 | 173.0 | 277.0 | 234.0 | 247.0 |
N052 | chr6 | 125257180 | 125262833 | TRUE | OK | 11.7 | 0.00915 | 0.02752 | 0.5401 | 0.847 | 0.424 | 10.0 | 9.0 | 8.0 | 12.0 | 15.0 | 17.0 |
N053 | chr6 | 125277240 | 125292827 | TRUE | OK | 31.7 | 0.00799 | 0.9072 | 0.9779 | -0.026 | -0.013 | 39.0 | 34.0 | 28.0 | 22.0 | 34.0 | 34.0 |
N054 | chr6 | 125300659 | 125301243 | TRUE | OK | 10.3 | 0.05 | 0.596 | 0.8866 | 0.330 | 0.165 | 11.0 | 9.0 | 9.0 | 10.0 | 18.0 | 5.0 |
N055 | chr6 | 125300659 | 125301597 | TRUE | OK | 19.8 | 0.00873 | 0.7117 | 0.9235 | 0.117 | 0.058 | 15.0 | 24.0 | 21.0 | 26.0 | 16.0 | 17.0 |
N056 | chr6 | 125300659 | 125302032 | TRUE | OK | 40.0 | 0.0292 | 0.1119 | 0.7093 | 0.576 | 0.288 | 39.0 | 39.0 | 25.0 | 41.0 | 31.0 | 67.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|