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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 19737983 | 19737986 | TRUE | OK | 9.7 | 0.0435 | 0.9143 | 0.9798 | -0.066 | -0.033 | 14.8 | 4.2 | 10.1 | 7.9 | 8.8 | 12.6 |
E002 | chr17 | 19737986 | 19737987 | TRUE | OK | 13.4 | 0.0237 | 0.5882 | 0.8841 | -0.224 | -0.112 | 20.7 | 10.4 | 11.1 | 8.9 | 13.7 | 15.5 |
E003 | chr17 | 19737987 | 19737988 | TRUE | OK | 34.7 | 0.0175 | 0.8011 | 0.9501 | 0.077 | 0.038 | 44.4 | 26.1 | 28.2 | 32.8 | 30.4 | 46.4 |
E004 | chr17 | 19737988 | 19738235 | TRUE | OK | 983.5 | 0.00783 | 0.01374 | 0.4353 | -0.400 | -0.200 | 933.8 | 1363.9 | 921.6 | 803.2 | 903.9 | 974.6 |
E005 | chr17 | 19738322 | 19738453 | TRUE | OK | 1254.3 | 0.00621 | 0.006623 | 0.3319 | -0.389 | -0.194 | 1190.1 | 1663.1 | 1217.7 | 1080.2 | 1136.9 | 1237.6 |
E006 | chr17 | 19738995 | 19739095 | TRUE | OK | 1058.5 | 0.00186 | 0.0004477 | 0.08304 | -0.294 | -0.147 | 1067.8 | 1295.1 | 1001.2 | 934.2 | 943.0 | 1109.9 |
E007 | chr17 | 19739507 | 19739624 | TRUE | OK | 1215.3 | 0.00346 | 0.0325 | 0.5635 | -0.236 | -0.118 | 1221.7 | 1488.0 | 1083.8 | 1110.9 | 1098.8 | 1288.8 |
E008 | chr17 | 19739624 | 19739674 | TRUE | OK | 1113.2 | 0.00519 | 0.05406 | 0.6351 | -0.257 | -0.129 | 1107.3 | 1401.4 | 991.1 | 1032.5 | 975.4 | 1171.8 |
E009 | chr17 | 19740174 | 19740335 | TRUE | OK | 53.8 | 0.031 | 6.273e-05 | 0.02244 | 1.474 | 0.737 | 28.6 | 29.2 | 25.2 | 41.7 | 82.3 | 116.0 |
E010 | chr17 | 19740335 | 19740370 | TRUE | OK | 1022.0 | 0.00671 | 0.1097 | 0.7077 | -0.242 | -0.121 | 1028.4 | 1284.6 | 890.4 | 971.9 | 870.6 | 1085.8 |
E011 | chr17 | 19740370 | 19740477 | TRUE | OK | 1184.5 | 0.00681 | 0.2918 | 0.7893 | -0.161 | -0.080 | 1210.8 | 1396.2 | 1017.3 | 1175.5 | 1023.3 | 1284.0 |
E012 | chr17 | 19741092 | 19741210 | TRUE | OK | 1033.5 | 0.00473 | 0.4651 | 0.8444 | -0.096 | -0.048 | 1070.8 | 1176.2 | 862.2 | 991.8 | 930.3 | 1169.9 |
E013 | chr17 | 19741210 | 19741231 | TRUE | OK | 36.9 | 0.0155 | 0.005132 | 0.2997 | 0.846 | 0.423 | 28.6 | 27.1 | 21.2 | 32.8 | 42.1 | 69.6 |
E014 | chr17 | 19741231 | 19741356 | TRUE | OK | 26.8 | 0.0469 | 0.02773 | 0.5412 | 1.055 | 0.527 | 12.8 | 22.9 | 15.1 | 16.9 | 35.3 | 58.0 |
E015 | chr17 | 19742003 | 19742212 | TRUE | OK | 1239.8 | 0.00715 | 0.9954 | 0.9989 | -0.002 | -0.001 | 1324.2 | 1214.8 | 1089.8 | 1268.8 | 1154.6 | 1386.4 |
E016 | chr17 | 19742544 | 19742625 | TRUE | OK | 838.7 | 0.00794 | 0.5149 | 0.8607 | 0.100 | 0.050 | 873.6 | 746.6 | 758.4 | 876.6 | 815.7 | 961.0 |
E017 | chr17 | 19742625 | 19742630 | TRUE | OK | 621.2 | 0.00802 | 0.8165 | 0.9543 | 0.035 | 0.017 | 661.6 | 570.4 | 565.1 | 655.2 | 584.6 | 690.3 |
E018 | chr17 | 19742630 | 19742728 | TRUE | OK | 84.6 | 0.00507 | 0.06903 | 0.6613 | 0.329 | 0.164 | 75.9 | 71.9 | 71.5 | 73.5 | 107.7 | 107.3 |
E019 | chr17 | 19742728 | 19743030 | TRUE | OK | 87.3 | 0.049 | 0.5896 | 0.8845 | 0.328 | 0.164 | 73.0 | 66.7 | 86.6 | 44.7 | 110.7 | 142.1 |
E020 | chr17 | 19743030 | 19743231 | TRUE | OK | 70.5 | 0.0237 | 0.4775 | 0.8487 | 0.232 | 0.116 | 76.9 | 46.9 | 65.5 | 54.6 | 74.4 | 104.4 |
E021 | chr17 | 19743231 | 19743266 | TRUE | OK | 727.8 | 0.0101 | 0.9358 | 0.9848 | 0.013 | 0.006 | 800.6 | 664.2 | 655.7 | 761.5 | 660.0 | 824.7 |
E022 | chr17 | 19743266 | 19743401 | TRUE | OK | 1149.2 | 0.00859 | 0.8454 | 0.962 | -0.030 | -0.015 | 1220.7 | 1101.1 | 1068.7 | 1186.4 | 1035.1 | 1283.0 |
E023 | chr17 | 19743401 | 19743463 | TRUE | OK | 1206.9 | 0.0062 | 0.9951 | 0.9988 | 0.007 | 0.003 | 1195.0 | 1186.6 | 1142.2 | 1212.2 | 1076.2 | 1429.0 |
E024 | chr17 | 19743463 | 19743500 | TRUE | OK | 68.4 | 0.0172 | 0.1512 | 0.7353 | 0.419 | 0.210 | 52.3 | 59.4 | 59.4 | 47.7 | 88.1 | 103.5 |
E025 | chr17 | 19744821 | 19744967 | TRUE | OK | 88.9 | 0.0427 | 0.2108 | 0.7617 | 0.527 | 0.263 | 72.0 | 56.3 | 84.6 | 62.5 | 151.8 | 106.4 |
E026 | chr17 | 19744967 | 19744997 | TRUE | OK | 930.1 | 0.0054 | 0.7783 | 0.9439 | -0.029 | -0.015 | 930.8 | 925.9 | 888.4 | 924.3 | 822.6 | 1088.7 |
E027 | chr17 | 19744997 | 19745133 | TRUE | OK | 1000.0 | 0.00514 | 0.8605 | 0.966 | 0.028 | 0.014 | 988.0 | 963.5 | 949.8 | 1000.7 | 921.5 | 1176.6 |
E028 | chr17 | 19745133 | 19745134 | TRUE | OK | 691.6 | 0.00741 | 0.2858 | 0.787 | 0.166 | 0.083 | 680.3 | 608.9 | 628.5 | 737.6 | 654.2 | 840.2 |
E029 | chr17 | 19745134 | 19745146 | TRUE | OK | 92.9 | 0.0239 | 0.04785 | 0.6196 | 0.594 | 0.297 | 61.1 | 65.7 | 89.6 | 75.5 | 136.1 | 129.6 |
E030 | chr17 | 19745146 | 19745376 | TRUE | OK | 169.0 | 0.0306 | 0.01209 | 0.4159 | 0.821 | 0.410 | 111.4 | 101.1 | 146.0 | 133.0 | 249.7 | 272.6 |
E031 | chr17 | 19745376 | 19745412 | TRUE | OK | 100.9 | 0.0346 | 0.01366 | 0.4343 | 0.865 | 0.432 | 58.2 | 58.4 | 92.7 | 81.4 | 139.1 | 176.0 |
E032 | chr17 | 19745412 | 19745442 | TRUE | OK | 109.5 | 0.0217 | 0.003435 | 0.2489 | 0.834 | 0.417 | 74.9 | 63.6 | 91.7 | 95.3 | 147.9 | 183.7 |
E033 | chr17 | 19745442 | 19745459 | TRUE | OK | 105.2 | 0.0212 | 0.00935 | 0.3834 | 0.753 | 0.377 | 80.9 | 64.6 | 83.6 | 86.4 | 135.1 | 180.8 |
E034 | chr17 | 19745459 | 19745612 | TRUE | OK | 160.1 | 0.0326 | 0.01938 | 0.4864 | 0.805 | 0.403 | 130.2 | 90.7 | 120.9 | 121.1 | 218.4 | 279.4 |
E035 | chr17 | 19745612 | 19745680 | TRUE | OK | 112.7 | 0.0322 | 0.01145 | 0.4101 | 0.872 | 0.436 | 94.7 | 62.6 | 75.5 | 85.4 | 162.6 | 195.3 |
E036 | chr17 | 19747901 | 19747935 | TRUE | OK | 92.2 | 0.0329 | 0.00144 | 0.1614 | 1.076 | 0.538 | 61.1 | 39.6 | 72.5 | 84.4 | 143.0 | 152.8 |
E037 | chr17 | 19747935 | 19748216 | TRUE | OK | 161.3 | 0.0201 | 5.841e-06 | 0.003565 | 1.207 | 0.603 | 103.5 | 79.2 | 103.7 | 151.9 | 246.8 | 282.3 |
E038 | chr17 | 19748216 | 19748258 | TRUE | OK | 66.8 | 0.0176 | 3.366e-06 | 0.002304 | 1.309 | 0.654 | 43.4 | 33.4 | 35.3 | 62.5 | 96.0 | 130.5 |
E039 | chr17 | 19748258 | 19748293 | TRUE | OK | 726.0 | 0.00843 | 0.4413 | 0.8367 | 0.129 | 0.065 | 737.5 | 649.6 | 650.7 | 766.4 | 662.0 | 889.5 |
E040 | chr17 | 19748293 | 19748298 | TRUE | OK | 41.5 | 0.00883 | 0.2088 | 0.761 | 0.313 | 0.156 | 39.4 | 28.2 | 40.3 | 41.7 | 42.1 | 57.0 |
E041 | chr17 | 19748298 | 19748341 | TRUE | OK | 39.7 | 0.0081 | 0.4379 | 0.8355 | 0.197 | 0.099 | 39.4 | 29.2 | 39.3 | 36.7 | 39.2 | 54.1 |
E042 | chr17 | 19748341 | 19748364 | TRUE | OK | 11.9 | 0.0208 | 0.4117 | 0.8276 | 0.368 | 0.184 | 12.8 | 7.3 | 10.1 | 8.9 | 11.8 | 20.3 |
E043 | chr17 | 19748364 | 19748393 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0325 | 0.2249 | NA | NA | NA | 4.9 | 7.3 | 4.0 | 4.0 | 8.8 | 14.5 |
E044 | chr17 | 19748798 | 19748943 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.127 | 0.1042 | NA | NA | NA | 1.0 | 2.1 | 2.0 | 0.0 | 1.0 | 0.0 |
J045 | chr17 | 19738235 | 19738322 | TRUE | OK | 767.8 | 0.00717 | 0.01212 | 0.4162 | -0.394 | -0.197 | 721.8 | 1067.7 | 731.2 | 634.4 | 698.2 | 753.2 |
J046 | chr17 | 19738453 | 19738995 | TRUE | OK | 729.6 | 0.00228 | 0.0002981 | 0.06463 | -0.341 | -0.170 | 718.8 | 932.2 | 711.1 | 628.4 | 645.3 | 741.6 |
J047 | chr17 | 19738453 | 19739507 | TRUE | OK | 46.2 | 0.00341 | 0.1497 | 0.7345 | -0.287 | -0.144 | 43.4 | 57.3 | 48.3 | 43.7 | 40.2 | 44.5 |
J048 | chr17 | 19739095 | 19739507 | TRUE | OK | 563.5 | 0.00187 | 0.1052 | 0.7027 | -0.148 | -0.074 | 585.7 | 643.4 | 498.6 | 535.1 | 515.1 | 603.3 |
J049 | chr17 | 19739624 | 19741092 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.55 | 0.5236 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J050 | chr17 | 19739674 | 19740335 | TRUE | OK | 879.1 | 0.00747 | 0.04312 | 0.604 | -0.317 | -0.159 | 892.3 | 1128.2 | 798.7 | 844.9 | 717.8 | 892.4 |
J051 | chr17 | 19740477 | 19741092 | TRUE | OK | 646.5 | 0.00479 | 0.5872 | 0.8838 | -0.077 | -0.039 | 664.6 | 746.6 | 526.8 | 631.4 | 580.7 | 729.0 |
J052 | chr17 | 19741210 | 19742003 | TRUE | OK | 617.1 | 0.00539 | 0.2365 | 0.7712 | -0.157 | -0.078 | 666.5 | 688.2 | 540.9 | 597.7 | 515.1 | 694.2 |
J053 | chr17 | 19741231 | 19742003 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0713 | 0.2195 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 3.0 | 1.0 | 1.9 |
J054 | chr17 | 19742212 | 19742544 | TRUE | OK | 553.4 | 0.0085 | 0.4714 | 0.8466 | 0.115 | 0.057 | 586.7 | 482.8 | 489.5 | 587.7 | 533.7 | 640.0 |
J055 | chr17 | 19742630 | 19743231 | TRUE | OK | 550.3 | 0.0096 | 0.9406 | 0.9859 | -0.014 | -0.007 | 597.5 | 513.0 | 506.6 | 591.7 | 498.5 | 594.6 |
J056 | chr17 | 19742728 | 19743231 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.143 | 0.26 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 2.9 |
J057 | chr17 | 19743463 | 19744967 | TRUE | OK | 775.4 | 0.00721 | 0.7157 | 0.9247 | -0.045 | -0.023 | 777.0 | 770.6 | 752.4 | 788.3 | 658.1 | 905.9 |
J058 | chr17 | 19743463 | 19744997 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.29 | 0.9597 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 6.0 | 0.0 | 1.0 |
J059 | chr17 | 19743463 | 19748258 | TRUE | OK | 62.2 | 0.00471 | 0.01725 | 0.4701 | -0.448 | -0.224 | 72.0 | 70.9 | 67.5 | 60.6 | 43.1 | 59.0 |
J060 | chr17 | 19745134 | 19745376 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J061 | chr17 | 19745134 | 19745442 | TRUE | OK | 10.1 | 0.00984 | 0.4444 | 0.8377 | 0.311 | 0.156 | 8.9 | 10.4 | 7.1 | 11.9 | 10.8 | 11.6 |
J062 | chr17 | 19745134 | 19747901 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.528 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J063 | chr17 | 19745134 | 19747935 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0409 | 0.4076 | NA | NA | NA | 1.0 | 2.1 | 2.0 | 2.0 | 2.0 | 4.8 |
J064 | chr17 | 19745134 | 19748258 | TRUE | OK | 604.0 | 0.00964 | 0.6542 | 0.9058 | 0.082 | 0.041 | 624.1 | 545.3 | 551.0 | 652.3 | 535.7 | 715.5 |
J065 | chr17 | 19748216 | 19748798 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.126 | 0.1809 | NA | NA | NA | 0.0 | 2.1 | 2.0 | 0.0 | 1.0 | 0.0 |
N066 | chr17 | 19743463 | 19743569 | TRUE | OK | 19.4 | 0.0166 | 0.1018 | 0.6995 | 0.582 | 0.291 | 15.8 | 10.4 | 19.1 | 15.9 | 27.4 | 28.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000108602.18 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |