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Raw Counts Table (ENSG00000182718.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Raw Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr15	60347133	60347326	TRUE	OK	410.8	0.0158	0.1223	0.6625	0.385	0.193	458.0	328.0	332.0	375.0	628.0	350.0
E002	chr15	60347326	60347331	TRUE	OK	589.0	0.0125	0.5281	0.858	0.158	0.079	723.0	521.0	504.0	510.0	808.0	488.0
E003	chr15	60347331	60347336	TRUE	OK	1118.4	0.0085	0.6246	0.8922	-0.047	-0.024	1404.0	1124.0	1028.0	935.0	1383.0	880.0
E004	chr15	60347336	60347341	TRUE	OK	1257.5	0.00847	0.7273	0.9259	-0.026	-0.013	1588.0	1252.0	1135.0	1063.0	1558.0	1002.0
E005	chr15	60347341	60347689	TRUE	OK	67714.7	0.00519	0.1429	0.6822	0.193	0.096	77433.0	65018.0	59013.0	62883.0	81934.0	61953.0
E006	chr15	60349074	60349197	TRUE	OK	62532.7	0.00276	0.8591	0.9647	0.021	0.010	75807.0	61644.0	57023.0	59053.0	68336.0	55876.0
E007	chr15	60351191	60351192	TRUE	OK	305.0	0.0148	0.005771	0.2184	0.571	0.285	200.0	291.0	262.0	317.0	409.0	336.0
E008	chr15	60351192	60351251	TRUE	OK	47566.4	0.00156	0.8269	0.9554	0.016	0.008	56895.0	46889.0	44092.0	45494.0	50594.0	43244.0
E009	chr15	60351251	60351553	TRUE	OK	414.4	0.00275	1.935e-19	7.209e-16	0.954	0.477	326.0	309.0	250.0	561.0	532.0	509.0
E010	chr15	60351723	60351732	TRUE	OK	39612.1	0.00131	0.7926	0.9456	0.017	0.009	47254.0	39192.0	36619.0	37783.0	42192.0	36128.0
E011	chr15	60351732	60351781	TRUE	OK	52841.2	0.00107	0.7954	0.9465	0.015	0.008	62395.0	53465.0	48409.0	50636.0	55948.0	48174.0
E012	chr15	60351781	60351786	TRUE	OK	41913.3	0.00132	0.9255	0.9825	0.005	0.003	49657.0	42730.0	38285.0	40847.0	43505.0	38116.0
E013	chr15	60351786	60351819	TRUE	OK	51945.5	0.000751	0.8137	0.9515	-0.010	-0.005	60805.0	53202.0	48417.0	49674.0	54297.0	47097.0
E014	chr15	60352378	60352382	TRUE	OK	23.4	0.0069	0.0004173	0.04381	1.007	0.503	21.0	15.0	13.0	32.0	30.0	30.0
E015	chr15	60352382	60352476	TRUE	OK	67400.8	0.000871	0.8471	0.9612	-0.010	-0.005	79122.0	68996.0	62615.0	64596.0	69939.0	61574.0
E016	chr15	60354152	60354153	TRUE	OK	702.3	0.0125	0.3254	0.7817	0.162	0.081	573.0	773.0	688.0	669.0	729.0	766.0
E017	chr15	60354153	60354213	TRUE	OK	58874.4	0.000755	0.3153	0.7775	-0.046	-0.023	69988.0	61146.0	54771.0	55406.0	60805.0	53394.0
E018	chr15	60355427	60355918	TRUE	OK	281.3	0.00739	0.6265	0.8928	0.067	0.034	287.0	330.0	238.0	287.0	261.0	293.0
E019	chr15	60355918	60355960	TRUE	OK	49047.0	0.00168	0.5612	0.87	-0.040	-0.020	60004.0	50444.0	44619.0	46349.0	50506.0	44608.0
E020	chr15	60355960	60355998	TRUE	OK	59558.4	0.00071	0.04293	0.5103	-0.092	-0.046	71277.0	62026.0	56842.0	55494.0	59678.0	54317.0
E021	chr15	60357145	60357190	TRUE	OK	57676.7	0.000987	0.1089	0.6471	-0.086	-0.043	69612.0	59964.0	54471.0	53919.0	57664.0	52796.0
E022	chr15	60357190	60357193	TRUE	OK	47704.0	0.00102	0.1022	0.6378	-0.090	-0.045	57637.0	49702.0	45188.0	44678.0	47336.0	43653.0
E023	chr15	60357193	60357236	TRUE	OK	57507.9	0.000971	0.1191	0.6596	-0.084	-0.042	69155.0	59634.0	54541.0	53705.0	57316.0	52996.0
E024	chr15	60360930	60360940	TRUE	OK	596.3	0.0135	0.2663	0.7565	0.215	0.107	483.0	639.0	573.0	506.0	729.0	629.0
E025	chr15	60360940	60360941	TRUE	OK	44804.4	0.000633	0.006262	0.2277	-0.117	-0.059	53876.0	46601.0	43712.0	40701.0	44520.0	41072.0
E026	chr15	60360941	60360966	TRUE	OK	46904.4	0.000712	0.01207	0.3131	-0.114	-0.057	56543.0	48669.0	45603.0	42824.0	46585.0	42976.0
E027	chr15	60360966	60361054	TRUE	OK	62138.2	0.00237	0.1127	0.6513	-0.134	-0.067	75719.0	65332.0	59467.0	58942.0	59049.0	57052.0
E028	chr15	60361447	60361486	TRUE	OK	17.6	0.0183	0.7804	0.9421	-0.108	-0.054	16.0	17.0	23.0	19.0	12.0	18.0
E029	chr15	60362626	60363022	TRUE	OK	61.5	0.0204	0.9353	0.9851	-0.007	-0.003	89.0	71.0	36.0	58.0	60.0	62.0
E030	chr15	60364428	60364475	TRUE	OK	51966.8	0.00501	0.1854	0.7143	-0.162	-0.081	65196.0	55038.0	49292.0	50681.0	46864.0	47480.0
E031	chr15	60364475	60364523	TRUE	OK	48619.8	0.00871	0.263	0.7548	-0.180	-0.090	61900.0	52545.0	45245.0	48738.0	41407.0	44823.0
E032	chr15	60374451	60374505	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.201	0.9322	NA	NA	NA	7.0	0.0	2.0	1.0	4.0	2.0
E033	chr15	60374618	60374682	TRUE	OK	37.6	0.00463	0.3525	0.7922	-0.208	-0.104	50.0	40.0	36.0	35.0	34.0	33.0
E034	chr15	60382341	60382347	TRUE	OK	38316.7	0.0111	0.2104	0.7296	-0.224	-0.112	49671.0	42448.0	35638.0	38749.0	30940.0	35001.0
E035	chr15	60382347	60382441	TRUE	OK	51714.7	0.00998	0.1265	0.6667	-0.261	-0.131	64170.0	57095.0	51305.0	50974.0	41714.0	47678.0
E036	chr15	60382441	60384827	TRUE	OK	151.2	0.00591	0.003965	0.1784	0.459	0.229	138.0	139.0	120.0	175.0	152.0	185.0
E037	chr15	60385556	60386027	TRUE	OK	21.3	0.0237	0.2367	0.7437	-0.448	-0.224	38.0	24.0	16.0	17.0	14.0	22.0
E038	chr15	60386027	60386086	TRUE	OK	39412.3	0.00946	0.208	0.7279	-0.209	-0.105	48732.0	43534.0	38090.0	39098.0	32035.0	37072.0
E039	chr15	60386086	60387097	TRUE	OK	1071.9	0.0135	0.9256	0.9825	-0.008	-0.004	959.0	1156.0	1176.0	1032.0	961.0	1129.0
E040	chr15	60390212	60390317	TRUE	OK	420.2	0.0102	0.2427	0.7463	-0.207	-0.104	522.0	456.0	424.0	439.0	319.0	383.0
E041	chr15	60391022	60391107	TRUE	OK	30.0	0.00612	0.5345	0.8603	-0.157	-0.078	40.0	32.0	27.0	24.0	27.0	32.0
E042	chr15	60391107	60391127	TRUE	OK	23.4	0.0067	0.9338	0.9847	-0.024	-0.012	31.0	23.0	20.0	23.0	23.0	22.0
E043	chr15	60391127	60391151	TRUE	OK	17.9	0.00911	0.7622	0.9366	0.097	0.049	23.0	13.0	18.0	16.0	20.0	18.0
E044	chr15	60391242	60391297	TRUE	OK	14.0	0.0115	0.9554	0.9902	0.029	0.014	17.0	12.0	14.0	10.0	19.0	12.0
E045	chr15	60393037	60393096	TRUE	OK	595.4	0.00923	0.4033	0.8117	-0.141	-0.071	751.0	603.0	594.0	590.0	472.0	594.0
E046	chr15	60393096	60393440	TRUE	OK	1039.4	0.00848	0.4658	0.8354	-0.116	-0.058	1307.0	1093.0	979.0	1057.0	845.0	1016.0
E047	chr15	60394573	60394695	TRUE	OK	46.6	0.00625	0.1559	0.6932	-0.311	-0.156	55.0	51.0	54.0	43.0	33.0	45.0
E048	chr15	60395644	60395906	TRUE	OK	36.5	0.00727	0.3367	0.7861	-0.231	-0.115	50.0	34.0	39.0	25.0	34.0	39.0
E049	chr15	60395906	60396150	TRUE	OK	63.4	0.00354	0.01902	0.3805	-0.421	-0.210	88.0	68.0	70.0	55.0	52.0	51.0
E050	chr15	60396150	60396279	TRUE	OK	364.4	0.0022	0.02293	0.4092	-0.229	-0.115	461.0	404.0	361.0	338.0	316.0	325.0
E051	chr15	60396279	60396372	TRUE	OK	552.3	0.00761	0.07466	0.593	-0.277	-0.138	718.0	633.0	538.0	523.0	425.0	512.0
E052	chr15	60396372	60396427	TRUE	OK	488.1	0.00895	0.168	0.7025	-0.232	-0.116	621.0	569.0	457.0	491.0	379.0	443.0
E053	chr15	60397254	60397257	TRUE	OK	13.2	0.0145	0.3757	0.8008	-0.342	-0.171	15.0	19.0	12.0	15.0	8.0	11.0
E054	chr15	60397257	60397338	TRUE	OK	5423.4	0.00894	0.411	0.8146	-0.132	-0.066	6960.0	5735.0	5038.0	5532.0	4435.0	5184.0
E055	chr15	60397870	60397942	TRUE	OK	183.4	0.00559	0.3232	0.7809	-0.155	-0.077	237.0	179.0	187.0	181.0	154.0	172.0
E056	chr15	60397942	60397964	TRUE	OK	22864.9	0.00912	0.1593	0.6959	-0.228	-0.114	28116.0	25347.0	22789.0	22547.0	18135.0	21390.0
E057	chr15	60397964	60397968	TRUE	OK	16448.7	0.00954	0.1813	0.7116	-0.220	-0.110	20059.0	18449.0	16318.0	16394.0	12919.0	15364.0
E058	chr15	60397968	60397973	TRUE	OK	8054.6	0.00983	0.1096	0.648	-0.266	-0.133	10495.0	8670.0	8187.0	7921.0	6164.0	7369.0
E059	chr15	60397973	60397974	TRUE	OK	2310.7	0.0113	0.1479	0.6866	-0.258	-0.129	3077.0	2454.0	2324.0	2250.0	1722.0	2188.0
E060	chr15	60397974	60397978	TRUE	OK	1855.0	0.0114	0.1488	0.6874	-0.259	-0.129	2475.0	1990.0	1846.0	1799.0	1377.0	1767.0
E061	chr15	60397978	60397984	TRUE	OK	323.7	0.00593	0.8434	0.9601	0.026	0.013	376.0	328.0	297.0	320.0	285.0	350.0
E062	chr15	60397984	60397985	TRUE	OK	111.6	0.00457	0.9377	0.9858	-0.014	-0.007	124.0	118.0	107.0	104.0	98.0	122.0
E063	chr15	60397985	60397986	TRUE	OK	96.1	0.00386	0.935	0.985	-0.015	-0.007	110.0	101.0	90.0	92.0	84.0	103.0
E064	chr15	60397986	60397988	TRUE	OK	82.5	0.0037	0.1605	0.6964	-0.231	-0.116	101.0	88.0	88.0	66.0	71.0	84.0
E065	chr15	60397988	60398001	TRUE	OK	73.2	0.00378	0.2733	0.7597	-0.188	-0.094	87.0	75.0	80.0	60.0	65.0	74.0
E066	chr15	60398001	60398033	TRUE	OK	15.8	0.0226	0.7465	0.9317	-0.125	-0.062	17.0	15.0	19.0	15.0	9.0	20.0
E067	chr15	60398033	60398043	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.273	0.7515	NA	NA	NA	0.0	3.0	5.0	2.0	1.0	7.0
E068	chr15	60398644	60398742	TRUE	OK	35.1	0.0213	0.2573	0.7522	0.358	0.179	30.0	29.0	36.0	50.0	29.0	36.0
E069	chr15	60402768	60402883	TRUE	OK	3.7	0.0727	0.1605	0.6964	-1.091	-0.545	8.0	3.0	5.0	1.0	1.0	5.0
J070	chr15	60347689	60349074	TRUE	OK	40286.4	0.00274	0.8995	0.9758	-0.007	-0.003	49754.0	39583.0	36947.0	38081.0	43673.0	35451.0
J071	chr15	60347689	60351192	TRUE	OK	15.1	0.0292	0.3888	0.8056	0.379	0.190	11.0	11.0	18.0	11.0	24.0	14.0
J072	chr15	60349197	60351192	TRUE	OK	34569.8	0.00154	0.9868	0.9975	0.004	0.002	41929.0	34238.0	31762.0	32546.0	37126.0	31229.0
J073	chr15	60351251	60351723	TRUE	OK	38627.2	0.00107	0.8997	0.9758	0.008	0.004	46093.0	38276.0	35921.0	36702.0	41046.0	35167.0
J074	chr15	60351819	60352378	TRUE	OK	3.3	0.0275	0.07118	0.585	1.322	0.661	3.0	2.0	1.0	5.0	6.0	3.0
J075	chr15	60351819	60352382	TRUE	OK	45537.9	0.000594	0.7871	0.944	-0.011	-0.005	53160.0	46869.0	42379.0	43688.0	47481.0	41241.0
J076	chr15	60352476	60354153	TRUE	OK	48684.0	0.000374	0.03208	0.4626	-0.070	-0.035	57762.0	50555.0	46348.0	45418.0	50008.0	43765.0
J077	chr15	60354213	60355918	TRUE	OK	42039.0	0.000793	0.1572	0.6944	-0.067	-0.033	51054.0	43503.0	39217.0	39160.0	43088.0	37986.0
J078	chr15	60355998	60357145	TRUE	OK	49403.1	0.000691	0.02372	0.4142	-0.102	-0.051	59390.0	51748.0	47223.0	46026.0	48859.0	45131.0
J079	chr15	60357236	60360930	TRUE	OK	5.2	0.0238	0.855	0.9634	0.102	0.051	8.0	6.0	2.0	7.0	6.0	3.0
J080	chr15	60357236	60360940	TRUE	OK	44257.6	0.000493	0.001731	0.1109	-0.119	-0.060	53309.0	46027.0	43181.0	40178.0	43982.0	40517.0
J081	chr15	60361054	60364428	TRUE	OK	43180.4	0.003	0.1017	0.6373	-0.155	-0.077	53685.0	45596.0	41436.0	41293.0	39833.0	39348.0
J082	chr15	60361054	60386027	TRUE	OK	3.3	0.0311	0.5909	0.8803	0.383	0.191	3.0	3.0	3.0	6.0	2.0	3.0
J083	chr15	60361486	60364428	FALSE	LOW_COUNTS_INDEP_FILTER	1.9	0.0683	0.7144	NA	NA	NA	0.0	2.0	3.0	3.0	1.0	2.0
J084	chr15	60363022	60364428	TRUE	OK	31.8	0.0376	0.9083	0.978	-0.019	-0.009	58.0	26.0	19.0	32.0	32.0	29.0
J085	chr15	60364523	60374451	FALSE	LOW_COUNTS_INDEP_FILTER	1.4	0.156	0.487	NA	NA	NA	4.0	0.0	2.0	1.0	0.0	2.0
J086	chr15	60364523	60374618	TRUE	OK	4.2	0.128	0.3771	0.8014	-0.767	-0.384	4.0	3.0	9.0	6.0	2.0	1.0
J087	chr15	60364523	60382341	TRUE	OK	36817.6	0.0111	0.1977	0.722	-0.230	-0.115	47873.0	40783.0	34366.0	37125.0	29662.0	33554.0
J088	chr15	60364523	60386027	TRUE	OK	47.3	0.0343	0.9411	0.9866	0.021	0.011	68.0	36.0	44.0	57.0	31.0	52.0
J089	chr15	60364523	60397257	TRUE	OK	20.7	0.00638	0.1171	0.657	-0.460	-0.230	27.0	29.0	19.0	18.0	14.0	19.0
J090	chr15	60364523	60397942	TRUE	OK	42.6	0.0312	0.2742	0.7601	-0.363	-0.182	52.0	54.0	43.0	42.0	21.0	46.0
J091	chr15	60374682	60382341	TRUE	OK	32.3	0.00425	0.2711	0.7586	-0.258	-0.129	44.0	36.0	30.0	25.0	28.0	33.0
J092	chr15	60382441	60386027	TRUE	OK	38266.4	0.00923	0.1899	0.7172	-0.215	-0.108	47297.0	42380.0	37108.0	37769.0	31112.0	35942.0
J093	chr15	60386086	60390212	TRUE	OK	382.6	0.012	0.2576	0.7524	-0.215	-0.108	476.0	409.0	394.0	402.0	283.0	351.0
J094	chr15	60386086	60391242	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.518	0.5322	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J095	chr15	60386086	60393037	TRUE	OK	305.5	0.014	0.2634	0.755	-0.234	-0.117	380.0	309.0	336.0	294.0	219.0	308.0
J096	chr15	60386086	60394573	TRUE	OK	18.1	0.00953	0.08414	0.6104	-0.561	-0.280	21.0	18.0	27.0	11.0	17.0	14.0
J097	chr15	60386086	60396150	TRUE	OK	138.9	0.00131	0.4334	0.8233	-0.091	-0.045	163.0	147.0	136.0	129.0	137.0	126.0
J098	chr15	60386086	60396279	TRUE	OK	114.9	0.0283	0.05504	0.5472	-0.569	-0.284	175.0	146.0	110.0	102.0	60.0	109.0
J099	chr15	60386086	60396372	TRUE	OK	13.9	0.018	0.6378	0.8971	0.197	0.098	13.0	13.0	14.0	18.0	18.0	7.0
J100	chr15	60386086	60397254	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.861	0.3295	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	3.0
J101	chr15	60386086	60397257	TRUE	OK	4984.5	0.00875	0.4183	0.8177	-0.129	-0.064	6397.0	5237.0	4647.0	5076.0	4093.0	4770.0
J102	chr15	60386086	60397870	TRUE	OK	158.8	0.00241	0.1765	0.708	-0.170	-0.085	199.0	163.0	162.0	150.0	136.0	150.0
J103	chr15	60386086	60397942	TRUE	OK	19651.2	0.00888	0.1518	0.6899	-0.229	-0.114	23970.0	21804.0	19795.0	19285.0	15576.0	18401.0
J104	chr15	60386086	60398644	TRUE	OK	31.3	0.0147	0.1744	0.7066	0.396	0.198	28.0	26.0	30.0	43.0	26.0	35.0
J105	chr15	60386086	60402768	TRUE	OK	3.6	0.0768	0.2104	0.7296	-0.994	-0.497	8.0	3.0	4.0	1.0	1.0	5.0
J106	chr15	60390317	60391022	TRUE	OK	4.2	0.0766	0.2328	0.7418	0.911	0.455	2.0	2.0	5.0	4.0	3.0	9.0
J107	chr15	60390317	60391107	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.083	0.3693	NA	NA	NA	2.0	5.0	1.0	2.0	2.0	0.0
J108	chr15	60390317	60397257	TRUE	OK	33.3	0.027	0.6892	0.914	-0.147	-0.074	49.0	40.0	22.0	41.0	26.0	26.0
J109	chr15	60390317	60397942	TRUE	OK	103.7	0.0145	0.3083	0.7747	-0.233	-0.117	134.0	115.0	101.0	110.0	70.0	99.0
J110	chr15	60393440	60396150	TRUE	OK	7.6	0.0123	0.1176	0.6575	0.734	0.367	7.0	6.0	5.0	8.0	9.0	11.0
J111	chr15	60393440	60397942	TRUE	OK	286.8	0.00698	0.7818	0.9425	-0.049	-0.025	370.0	303.0	243.0	294.0	250.0	281.0
J112	chr15	60394695	60396279	TRUE	OK	4.8	0.0197	0.9886	0.9978	-0.006	-0.003	4.0	6.0	5.0	6.0	5.0	3.0
J113	chr15	60396427	60397257	TRUE	OK	315.6	0.00878	0.2609	0.7538	-0.194	-0.097	395.0	366.0	291.0	316.0	246.0	299.0
J114	chr15	60396427	60397942	TRUE	OK	63.3	0.0207	0.1595	0.6959	-0.399	-0.199	88.0	84.0	54.0	70.0	42.0	48.0
J115	chr15	60397338	60397870	TRUE	OK	19.5	0.0378	0.8679	0.9672	0.035	0.017	32.0	11.0	18.0	24.0	16.0	18.0
J116	chr15	60397338	60397942	TRUE	OK	2632.0	0.00869	0.2497	0.7495	-0.183	-0.091	3389.0	2904.0	2455.0	2657.0	2116.0	2442.0
N117	chr15	60364523	60378705	TRUE	OK	11.8	0.00908	0.3455	0.7894	-0.356	-0.178	13.0	16.0	12.0	11.0	12.0	7.0
N118	chr15	60386086	60393012	TRUE	OK	113.5	0.00969	0.5399	0.8622	-0.120	-0.060	146.0	120.0	104.0	99.0	91.0	128.0
N119	chr15	60386086	60393238	TRUE	OK	48.9	0.00321	0.9657	0.9926	0.007	0.004	56.0	50.0	46.0	51.0	43.0	49.0
N120	chr15	60386086	60396966	TRUE	OK	14.5	0.0094	0.06066	0.5615	-0.664	-0.332	22.0	23.0	11.0	11.0	11.0	11.0
N121	chr15	60386086	60398478	TRUE	OK	28.9	0.0159	0.2375	0.7439	-0.351	-0.175	36.0	39.0	26.0	15.0	27.0	32.0
N122	chr15	60393440	60397257	TRUE	OK	19.2	0.044	0.8079	0.9498	0.065	0.033	33.0	12.0	15.0	22.0	14.0	22.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000182718.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE