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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr2 | 46901869 | 46901873 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.227 | 0.7057 | NA | NA | NA | NA | NA |
E002 | chr2 | 46901873 | 46901966 | TRUE | OK | 223.8 | 0.0427 | 0.1927 | 0.719 | 0.523 | 0.261 | 161.1 | 286.3 |
E003 | chr2 | 46901966 | 46904854 | TRUE | OK | 6374.4 | 0.00229 | 0.2494 | 0.7493 | 0.089 | 0.044 | 5606.0 | 7142.8 |
E004 | chr2 | 46904854 | 46904957 | TRUE | OK | 726.0 | 0.0353 | 0.6238 | 0.8919 | -0.057 | -0.028 | 659.5 | 792.9 |
E005 | chr2 | 46904957 | 46905244 | TRUE | OK | 1277.1 | 0.0192 | 0.7662 | 0.9379 | -0.018 | -0.009 | 1144.1 | 1410.8 |
E006 | chr2 | 46905244 | 46905270 | TRUE | OK | 576.5 | 0.00437 | 0.7363 | 0.9285 | -0.035 | -0.018 | 520.6 | 634.3 |
E007 | chr2 | 46905270 | 46905367 | TRUE | OK | 816.9 | 0.00331 | 0.9972 | 0.9998 | 0.000 | 0.000 | 728.1 | 908.0 |
E008 | chr2 | 46905367 | 46905393 | TRUE | OK | 645.1 | 0.0038 | 0.6384 | 0.8972 | 0.049 | 0.024 | 564.8 | 726.9 |
E009 | chr2 | 46905393 | 46905465 | TRUE | OK | 812.8 | 0.00401 | 0.2196 | 0.735 | 0.133 | 0.066 | 690.4 | 936.6 |
E010 | chr2 | 46905465 | 46905590 | TRUE | OK | 1051.5 | 0.0039 | 0.1643 | 0.6994 | 0.149 | 0.075 | 889.3 | 1215.9 |
E011 | chr2 | 46905590 | 46905594 | TRUE | OK | 601.6 | 0.00425 | 0.1938 | 0.7195 | 0.153 | 0.077 | 506.9 | 698.2 |
E012 | chr2 | 46905816 | 46905982 | TRUE | OK | 16.5 | 0.0183 | 0.05541 | 0.5482 | -0.702 | -0.351 | 18.5 | 14.2 |
E013 | chr2 | 46907528 | 46907699 | TRUE | OK | 7.3 | 0.0227 | 0.02816 | 0.4417 | 1.160 | 0.580 | 3.9 | 10.8 |
E014 | chr2 | 46907699 | 46907809 | TRUE | OK | 19.1 | 0.00913 | 0.9245 | 0.9822 | -0.032 | -0.016 | 17.2 | 21.0 |
E015 | chr2 | 46907809 | 46907934 | TRUE | OK | 1048.9 | 0.00385 | 0.4235 | 0.8196 | 0.092 | 0.046 | 905.2 | 1194.8 |
E016 | chr2 | 46907934 | 46907969 | TRUE | OK | 901.2 | 0.00795 | 0.9089 | 0.9782 | 0.025 | 0.012 | 796.0 | 1008.1 |
E017 | chr2 | 46908706 | 46909022 | TRUE | OK | 18.2 | 0.0385 | 0.8647 | 0.9663 | 0.055 | 0.027 | 15.9 | 20.6 |
E018 | chr2 | 46909022 | 46909072 | TRUE | OK | 997.4 | 0.00388 | 0.7132 | 0.9214 | -0.031 | -0.015 | 898.0 | 1098.5 |
E019 | chr2 | 46909072 | 46909177 | TRUE | OK | 985.6 | 0.00276 | 0.3663 | 0.7974 | -0.079 | -0.039 | 901.7 | 1070.5 |
E020 | chr2 | 46910779 | 46910873 | TRUE | OK | 38.9 | 0.0109 | 0.5275 | 0.8578 | -0.166 | -0.083 | 37.1 | 41.2 |
E021 | chr2 | 46912542 | 46912658 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0589 | 0.1853 | NA | NA | NA | NA | NA |
E022 | chr2 | 46913699 | 46914068 | TRUE | OK | 11.7 | 0.0762 | 0.6577 | 0.9036 | 0.184 | 0.092 | 9.8 | 13.9 |
E023 | chr2 | 46914068 | 46914074 | TRUE | OK | 4.5 | 0.0785 | 0.8182 | 0.9529 | -0.233 | -0.117 | 4.5 | 4.7 |
E024 | chr2 | 46914074 | 46914118 | TRUE | OK | 4.5 | 0.112 | 0.8938 | 0.9743 | -0.015 | -0.008 | 4.1 | 5.1 |
E025 | chr2 | 46915722 | 46915761 | TRUE | OK | 557.4 | 0.00338 | 0.1594 | 0.6959 | 0.154 | 0.077 | 469.4 | 647.1 |
E026 | chr2 | 46915761 | 46915780 | TRUE | OK | 334.7 | 0.00313 | 0.06006 | 0.5602 | 0.210 | 0.105 | 275.6 | 395.6 |
E027 | chr2 | 46915780 | 46915789 | TRUE | OK | 88.7 | 0.0123 | 0.09906 | 0.6339 | 0.371 | 0.185 | 68.4 | 109.9 |
E028 | chr2 | 46915789 | 46915791 | TRUE | OK | 37.9 | 0.0057 | 0.1531 | 0.691 | 0.332 | 0.166 | 29.7 | 46.6 |
E029 | chr2 | 46915791 | 46915810 | TRUE | OK | 35.6 | 0.006 | 0.05642 | 0.5508 | 0.456 | 0.228 | 26.5 | 45.3 |
E030 | chr2 | 46915810 | 46915816 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.9 | 0.747 | 0.7579 | NA | NA | NA | NA | NA |
E031 | chr2 | 46915816 | 46915868 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.181 | 0.2342 | NA | NA | NA | NA | NA |
E032 | chr2 | 46915980 | 46916054 | TRUE | OK | 15.3 | 0.0128 | 0.6994 | 0.917 | -0.135 | -0.068 | 14.3 | 16.2 |
E033 | chr2 | 46916054 | 46916112 | TRUE | OK | 6.8 | 0.0773 | 0.6118 | 0.8876 | 0.377 | 0.189 | 5.2 | 8.4 |
E034 | chr2 | 46941571 | 46941714 | TRUE | OK | 475.0 | 0.0015 | 1.718e-21 | 7.477e-18 | -0.811 | -0.405 | 548.8 | 401.0 |
E035 | chr2 | 46941714 | 46941727 | TRUE | OK | 279.0 | 0.00256 | 2.337e-13 | 3.921e-10 | -0.809 | -0.404 | 323.9 | 234.4 |
E036 | chr2 | 46941727 | 46941732 | TRUE | OK | 9.1 | 0.0317 | 0.336 | 0.7857 | -0.486 | -0.243 | 9.5 | 8.5 |
E037 | chr2 | 46941732 | 46941773 | TRUE | OK | 6.3 | 0.063 | 0.7915 | 0.9453 | -0.204 | -0.102 | 5.9 | 6.4 |
E038 | chr2 | 46941773 | 46941855 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.505 | 0.6171 | NA | NA | NA | NA | NA |
J039 | chr2 | 46905590 | 46907809 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.174 | 0.07877 | NA | NA | NA | NA | NA |
J040 | chr2 | 46905594 | 46907809 | TRUE | OK | 578.3 | 0.00419 | 0.1841 | 0.7136 | 0.157 | 0.079 | 486.6 | 672.1 |
J041 | chr2 | 46905594 | 46915722 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.6 | 0.549 | 0.5148 | NA | NA | NA | NA | NA |
J042 | chr2 | 46905594 | 46941571 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.179 | 0.7518 | NA | NA | NA | NA | NA |
J043 | chr2 | 46905982 | 46907809 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0369 | 0.3053 | NA | NA | NA | NA | NA |
J044 | chr2 | 46907969 | 46909022 | TRUE | OK | 721.0 | 0.00773 | 0.7796 | 0.9419 | -0.028 | -0.014 | 648.9 | 794.6 |
J045 | chr2 | 46907969 | 46915722 | TRUE | OK | 26.7 | 0.00603 | 0.5867 | 0.8788 | 0.140 | 0.070 | 22.6 | 31.1 |
J046 | chr2 | 46907969 | 46915980 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.252 | 0.2921 | NA | NA | NA | NA | NA |
J047 | chr2 | 46907969 | 46941571 | TRUE | OK | 5.3 | 0.0367 | 0.3145 | 0.777 | -0.621 | -0.310 | 5.8 | 4.7 |
J048 | chr2 | 46909177 | 46910779 | TRUE | OK | 31.3 | 0.00431 | 0.9548 | 0.99 | -0.012 | -0.006 | 28.2 | 34.8 |
J049 | chr2 | 46909177 | 46912542 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.242 | 0.2963 | NA | NA | NA | NA | NA |
J050 | chr2 | 46909177 | 46913699 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.282 | 0.3326 | NA | NA | NA | NA | NA |
J051 | chr2 | 46909177 | 46915722 | TRUE | OK | 505.1 | 0.00243 | 0.09755 | 0.632 | 0.164 | 0.082 | 423.6 | 588.3 |
J052 | chr2 | 46909177 | 46915980 | TRUE | OK | 10.1 | 0.0118 | 0.6076 | 0.8861 | -0.211 | -0.105 | 9.7 | 10.5 |
J053 | chr2 | 46909177 | 46941571 | TRUE | OK | 143.3 | 0.00801 | 1.177e-08 | 7.456e-06 | -1.016 | -0.508 | 176.5 | 110.0 |
J054 | chr2 | 46910873 | 46914068 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.4 | 0.737 | 0.3303 | NA | NA | NA | NA | NA |
J055 | chr2 | 46910873 | 46915722 | TRUE | OK | 19.6 | 0.00763 | 0.8285 | 0.9558 | 0.063 | 0.031 | 17.1 | 22.3 |
J056 | chr2 | 46912658 | 46915722 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
N057 | chr2 | 46941725 | 46950362 | TRUE | OK | 247.8 | 0.00479 | 3.372e-09 | 2.426e-06 | -0.816 | -0.408 | 288.9 | 207.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000180398.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |