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Normalized Counts Table (ENSG00000151690.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr2	190408354	190408503	TRUE	OK	82.4	0.0157	0.05995	0.5599	-0.451	-0.225	119.4	117.8	109.7	44.5	32.5	70.6
E002	chr2	190415291	190415413	TRUE	OK	33.3	0.00547	0.6473	0.9	-0.111	-0.055	46.9	44.5	38.8	24.7	17.8	27.2
E003	chr2	190433326	190433392	TRUE	OK	4.0	0.032	0.36	0.7951	0.615	0.308	3.4	4.9	4.4	4.9	4.2	2.0
E004	chr2	190435300	190435329	TRUE	OK	3.3	0.0481	0.432	0.8228	0.574	0.287	3.4	5.9	1.1	2.0	3.1	4.0
E005	chr2	190435894	190435976	TRUE	OK	5.4	0.0267	0.09258	0.6247	0.954	0.477	6.8	5.9	2.2	4.9	6.3	6.1
E006	chr2	190435976	190436156	TRUE	OK	145.7	0.00334	0.04178	0.5057	-0.287	-0.143	187.7	211.8	192.9	102.8	70.2	108.9
E007	chr2	190436156	190436373	TRUE	OK	172.9	0.00409	0.1463	0.6852	-0.206	-0.103	222.6	209.8	258.3	137.4	94.3	115.0
E008	chr2	190436373	190436498	TRUE	OK	142.1	0.00749	0.06715	0.5771	-0.319	-0.160	185.9	173.2	222.8	111.7	64.9	93.8
E009	chr2	190436498	190437423	TRUE	OK	553.7	0.0159	0.2656	0.7561	-0.206	-0.103	740.4	717.6	733.9	457.6	250.4	422.6
E010	chr2	190437423	190437561	TRUE	OK	179.3	0.0065	0.03559	0.4797	-0.332	-0.166	254.2	226.7	253.9	142.3	77.5	121.0
E011	chr2	190442575	190443005	TRUE	OK	7.9	0.02	0.194	0.7195	0.623	0.312	11.1	5.9	7.8	8.9	8.4	5.0
E012	chr2	190469492	190469649	TRUE	OK	6.1	0.0276	0.1518	0.69	0.786	0.393	6.8	5.9	5.5	4.0	9.4	5.0
E013	chr2	190469757	190469855	TRUE	OK	124.3	0.00387	0.002811	0.1469	-0.462	-0.231	186.8	157.4	179.6	89.9	55.5	76.7
E014	chr2	190488656	190488818	TRUE	OK	160.1	0.00595	0.01696	0.3635	-0.397	-0.199	256.7	198.0	209.5	108.7	81.7	105.9
E015	chr2	190489767	190489819	TRUE	OK	124.6	0.00399	0.01993	0.3867	-0.364	-0.182	191.9	162.3	159.6	92.9	66.0	74.6
E016	chr2	190489819	190489866	TRUE	OK	125.5	0.00911	0.08233	0.607	-0.334	-0.167	197.0	161.3	156.3	104.8	64.9	68.6
E017	chr2	190497438	190497648	TRUE	OK	237.7	0.00453	0.1324	0.6724	-0.208	-0.104	343.7	303.9	299.3	195.7	139.3	144.2
E018	chr2	190497648	190497699	TRUE	OK	148.9	0.00443	0.1803	0.7105	-0.200	-0.100	215.8	191.0	186.2	125.5	84.8	89.8
E019	chr2	190497699	190497719	TRUE	OK	122.0	0.0051	0.2779	0.7618	-0.175	-0.087	180.8	146.5	156.3	102.8	64.9	80.7
E020	chr2	190497719	190497995	TRUE	OK	21.2	0.0104	3.924e-06	0.001131	1.421	0.710	20.5	10.9	18.8	26.7	27.2	23.2
E021	chr2	190499831	190499856	TRUE	OK	12.0	0.018	0.0474	0.5248	0.824	0.412	13.6	10.9	11.1	11.9	6.3	18.2
E022	chr2	190500014	190500276	TRUE	OK	217.7	0.0066	0.03947	0.4963	-0.326	-0.163	334.4	283.1	271.6	165.0	102.7	149.3
E023	chr2	190500276	190502113	TRUE	OK	906.0	0.0107	0.86	0.9649	-0.049	-0.024	1166.0	1184.8	1125.2	656.2	672.5	631.4
E024	chr2	190502113	190502314	TRUE	OK	62.5	0.00408	0.04939	0.5311	0.368	0.184	70.8	77.2	67.6	60.3	53.4	45.4
E025	chr2	190502314	190502315	TRUE	OK	18.9	0.00779	0.01081	0.2983	0.790	0.395	21.3	17.8	17.7	19.8	15.7	21.2
E026	chr2	190504995	190505121	TRUE	OK	27.0	0.0099	0.1183	0.6584	0.459	0.230	33.3	30.7	26.6	31.6	12.6	27.2
E027	chr2	190509162	190509205	TRUE	OK	146.4	0.00452	5.308e-19	1.882e-15	1.350	0.675	107.5	134.6	128.6	199.6	152.9	155.3
J028	chr2	190408503	190415291	TRUE	OK	21.4	0.00833	0.4417	0.8266	-0.240	-0.120	34.1	28.7	23.3	11.9	11.5	19.2
J029	chr2	190408503	190435976	TRUE	OK	37.7	0.037	0.0472	0.5241	-0.726	-0.363	50.3	67.3	49.9	15.8	10.5	32.3
J030	chr2	190415413	190433326	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.146	0.1437	NA	NA	NA	0.9	0.0	0.0	2.0	1.0	0.0
J031	chr2	190415413	190435976	TRUE	OK	17.1	0.00693	0.9786	0.9956	-0.000	-0.000	22.2	20.8	22.2	15.8	6.3	15.1
J032	chr2	190433392	190435976	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.305	0.2498	NA	NA	NA	0.0	0.0	2.2	3.0	1.0	0.0
J033	chr2	190435329	190435976	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J034	chr2	190437561	190469757	TRUE	OK	77.1	0.0037	0.003061	0.1542	-0.524	-0.262	117.7	101.0	110.9	59.3	31.4	42.4
J035	chr2	190443005	190469757	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.538	0.3522	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J036	chr2	190469649	190469757	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.263	0.6739	NA	NA	NA	0.9	0.0	0.0	0.0	1.0	0.0
J037	chr2	190469855	190488656	TRUE	OK	77.4	0.00452	0.002303	0.1315	-0.566	-0.283	125.4	97.0	110.9	48.4	33.5	49.4
J038	chr2	190488818	190489767	TRUE	OK	90.6	0.00492	0.027	0.4351	-0.400	-0.200	145.9	117.8	113.1	63.3	51.3	52.5
J039	chr2	190489866	190497438	TRUE	OK	111.2	0.00691	0.08346	0.6091	-0.313	-0.156	173.2	143.5	137.5	91.9	54.5	66.6
J040	chr2	190497719	190499831	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.501	0.8843	NA	NA	NA	0.0	0.0	1.1	0.0	0.0	0.0
J041	chr2	190497719	190500014	TRUE	OK	93.0	0.00649	0.008683	0.2686	-0.495	-0.248	150.1	125.7	118.6	71.2	42.9	49.4
J042	chr2	190499856	190500014	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.253	0.4555	NA	NA	NA	0.9	0.0	1.1	0.0	0.0	0.0
J043	chr2	190500276	190504995	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J044	chr2	190505121	190509162	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.501	0.8843	NA	NA	NA	0.0	0.0	1.1	0.0	0.0	0.0
N045	chr2	190455571	190510360	TRUE	OK	177.9	0.00492	8.654e-10	7.22e-07	0.907	0.454	182.5	160.3	184.0	180.9	185.4	174.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000151690.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE