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Raw Counts Table (ENSG00000121897.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Raw Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr4	39458586	39459003	TRUE	OK	6171.3	0.00136	5.286e-07	0.0002111	-0.363	-0.179	7768.0	6271.0	5679.0	5656.0	6408.0	5549.0
E002	chr4	39459003	39459030	TRUE	OK	4.0	0.0481	0.5951	0.8818	0.347	0.173	3.0	7.0	1.0	4.0	5.0	4.0
E003	chr4	39459030	39459044	TRUE	OK	3.8	0.0567	0.7225	0.9246	0.232	0.116	3.0	7.0	1.0	4.0	5.0	3.0
E004	chr4	39459044	39459057	TRUE	OK	5.1	0.0291	0.9657	0.9926	0.014	0.007	6.0	8.0	2.0	5.0	6.0	4.0
E005	chr4	39459057	39459062	TRUE	OK	5.8	0.0307	0.7254	0.9253	0.191	0.095	6.0	9.0	2.0	5.0	8.0	5.0
E006	chr4	39459062	39459065	TRUE	OK	6.0	0.0256	0.8409	0.9594	0.106	0.053	6.0	9.0	3.0	5.0	8.0	5.0
E007	chr4	39459065	39459086	TRUE	OK	25.9	0.0438	0.6214	0.8909	0.229	0.114	36.0	23.0	17.0	22.0	18.0	42.0
E008	chr4	39459086	39459092	TRUE	OK	24.7	0.0471	0.6992	0.917	0.178	0.089	37.0	20.0	17.0	22.0	16.0	39.0
E009	chr4	39459092	39459101	TRUE	OK	40.4	0.0377	0.6251	0.8923	0.218	0.109	52.0	33.0	33.0	34.0	29.0	64.0
E010	chr4	39459101	39459108	TRUE	OK	44.7	0.0374	0.6459	0.8996	0.200	0.100	60.0	36.0	36.0	37.0	33.0	70.0
E011	chr4	39459108	39459113	TRUE	OK	48.7	0.0337	0.4757	0.8387	0.273	0.137	64.0	39.0	37.0	42.0	38.0	76.0
E012	chr4	39459113	39459119	TRUE	OK	63.6	0.0316	0.4975	0.8466	0.228	0.114	90.0	52.0	45.0	58.0	50.0	93.0
E013	chr4	39459119	39459162	TRUE	OK	104.8	0.0346	0.4475	0.8285	0.276	0.138	134.0	96.0	72.0	105.0	76.0	155.0
E014	chr4	39459162	39459241	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.19	0.8418	NA	NA	NA	5.0	3.0	0.0	3.0	0.0	3.0
E015	chr4	39460789	39460872	TRUE	OK	166.0	0.0203	0.5712	0.8737	0.156	0.078	203.0	161.0	132.0	163.0	130.0	218.0
E016	chr4	39460872	39460873	TRUE	OK	150.0	0.0177	0.6779	0.9103	0.103	0.052	189.0	150.0	118.0	151.0	117.0	186.0
E017	chr4	39460873	39460962	TRUE	OK	217.9	0.00867	0.2239	0.7372	0.207	0.104	261.0	205.0	173.0	225.0	198.0	258.0
E018	chr4	39462195	39462217	TRUE	OK	153.9	0.00289	0.0394	0.4961	0.265	0.132	164.0	146.0	129.0	161.0	157.0	171.0
E019	chr4	39462217	39462289	TRUE	OK	194.9	0.00352	0.06592	0.5744	0.236	0.118	203.0	190.0	168.0	194.0	201.0	218.0
E020	chr4	39463524	39463605	TRUE	OK	203.5	0.00257	0.006702	0.2361	0.319	0.159	207.0	183.0	178.0	209.0	221.0	226.0
E021	chr4	39463605	39464163	TRUE	OK	27.8	0.00648	0.0006229	0.05759	0.906	0.453	25.0	18.0	18.0	35.0	43.0	28.0
E022	chr4	39464163	39464238	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.228	0.8047	NA	NA	NA	4.0	0.0	2.0	0.0	5.0	2.0
E023	chr4	39465045	39465202	TRUE	OK	216.9	0.00334	0.01939	0.383	0.291	0.146	216.0	204.0	191.0	222.0	232.0	239.0
E024	chr4	39465284	39465342	TRUE	OK	163.0	0.00197	0.02557	0.4262	0.260	0.130	183.0	140.0	143.0	169.0	178.0	170.0
E025	chr4	39466016	39466072	TRUE	OK	7.7	0.0179	0.6975	0.9163	0.171	0.085	12.0	6.0	5.0	8.0	8.0	8.0
E026	chr4	39466072	39466117	TRUE	OK	9.0	0.0183	0.3826	0.8032	0.373	0.187	14.0	5.0	6.0	11.0	9.0	10.0
E027	chr4	39466117	39467324	TRUE	OK	32.4	0.0142	0.2204	0.7355	0.346	0.173	40.0	25.0	25.0	29.0	31.0	46.0
E028	chr4	39467517	39467646	TRUE	OK	169.2	0.00225	0.05425	0.5451	0.231	0.115	181.0	158.0	149.0	183.0	191.0	157.0
E029	chr4	39467646	39468118	TRUE	OK	37.9	0.00552	0.7644	0.9373	-0.080	-0.040	55.0	39.0	29.0	37.0	35.0	36.0
E030	chr4	39468118	39468427	TRUE	OK	32.9	0.0134	0.1639	0.6989	-0.396	-0.198	34.0	39.0	42.0	31.0	30.0	21.0
E031	chr4	39468873	39469228	TRUE	OK	20.7	0.0207	0.204	0.7255	0.432	0.216	27.0	13.0	16.0	24.0	17.0	29.0
E032	chr4	39469228	39470018	TRUE	OK	35.5	0.00511	0.171	0.7042	0.310	0.155	44.0	30.0	26.0	36.0	45.0	34.0
E033	chr4	39470018	39470164	TRUE	OK	216.2	0.00271	0.1109	0.6498	0.188	0.094	247.0	200.0	188.0	238.0	243.0	189.0
E034	chr4	39470547	39470624	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.105	0.6499	NA	NA	NA	2.0	1.0	0.0	1.0	1.0	2.0
E035	chr4	39471235	39471306	TRUE	OK	170.7	0.00266	0.1241	0.6644	0.183	0.091	214.0	159.0	132.0	181.0	177.0	172.0
E036	chr4	39473099	39473106	TRUE	OK	120.5	0.00306	0.4442	0.8274	0.100	0.050	149.0	117.0	100.0	121.0	115.0	128.0
E037	chr4	39473106	39473211	TRUE	OK	175.6	0.00173	0.1606	0.6964	0.153	0.077	209.0	168.0	146.0	179.0	186.0	174.0
E038	chr4	39473211	39473653	TRUE	OK	7.0	0.0373	0.2399	0.7452	0.665	0.332	7.0	6.0	4.0	4.0	8.0	13.0
E039	chr4	39473653	39473993	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0618	0.02211	NA	NA	NA	1.0	0.0	1.0	2.0	4.0	4.0
E040	chr4	39474879	39477062	TRUE	OK	17.6	0.0101	0.1376	0.677	0.489	0.245	18.0	14.0	14.0	22.0	25.0	13.0
E041	chr4	39477062	39477075	TRUE	OK	139.5	0.00213	0.01433	0.3385	0.306	0.153	149.0	127.0	116.0	155.0	155.0	139.0
E042	chr4	39477075	39477160	TRUE	OK	185.8	0.00186	0.001607	0.106	0.353	0.177	193.0	166.0	154.0	206.0	210.0	190.0
E043	chr4	39477160	39477336	TRUE	OK	208.7	0.00211	9.164e-06	0.002265	0.500	0.250	201.0	185.0	159.0	240.0	259.0	211.0
E044	chr4	39477336	39477390	TRUE	OK	117.0	0.00454	8.348e-07	0.0003071	0.789	0.395	104.0	91.0	76.0	131.0	179.0	121.0
E045	chr4	39477390	39477414	TRUE	OK	93.7	0.00499	2.817e-07	0.0001217	0.892	0.446	77.0	72.0	58.0	99.0	147.0	108.0
E046	chr4	39477414	39477532	TRUE	OK	91.3	0.00358	6.269e-10	5.415e-07	1.005	0.503	74.0	64.0	54.0	101.0	143.0	111.0
E047	chr4	39477532	39477536	TRUE	OK	23.6	0.0278	0.0002918	0.03421	1.348	0.674	26.0	9.0	8.0	28.0	42.0	30.0
E048	chr4	39477536	39477584	TRUE	OK	24.5	0.0308	0.0004944	0.04924	1.328	0.664	27.0	10.0	8.0	29.0	45.0	29.0
E049	chr4	39477584	39477618	TRUE	OK	12.1	0.0342	0.02482	0.422	1.007	0.504	16.0	6.0	4.0	13.0	15.0	20.0
E050	chr4	39477618	39477648	TRUE	OK	4.9	0.0445	0.4074	0.8131	0.505	0.253	8.0	4.0	1.0	7.0	7.0	3.0
E051	chr4	39477648	39479300	TRUE	OK	13.5	0.0357	0.5253	0.8571	0.230	0.115	24.0	9.0	7.0	13.0	13.0	17.0
E052	chr4	39479300	39479506	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.102	0.6542	NA	NA	NA	2.0	1.0	0.0	1.0	2.0	1.0
E053	chr4	39484403	39485109	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.906	0.7404	NA	NA	NA	0.0	2.0	0.0	5.0	0.0	0.0
J054	chr4	39459162	39460789	TRUE	OK	103.5	0.0379	0.4098	0.8141	0.308	0.154	133.0	93.0	69.0	104.0	76.0	155.0
J055	chr4	39459241	39460789	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J056	chr4	39460962	39462195	TRUE	OK	136.0	0.00209	0.05364	0.5434	0.240	0.120	153.0	128.0	111.0	131.0	143.0	155.0
J057	chr4	39460962	39463524	TRUE	OK	16.1	0.0076	0.9889	0.9979	-0.014	-0.007	21.0	16.0	14.0	19.0	12.0	16.0
J058	chr4	39460962	39465045	FALSE	LOW_COUNTS_INDEP_FILTER	2.4	0.14	0.1714	NA	NA	NA	0.0	3.0	1.0	4.0	1.0	5.0
J059	chr4	39460962	39467517	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.252	0.2606	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	0.0
J060	chr4	39462289	39463524	TRUE	OK	138.1	0.00223	0.04573	0.5198	0.253	0.126	137.0	133.0	124.0	141.0	149.0	146.0
J061	chr4	39463605	39465045	TRUE	OK	130.2	0.00452	0.1002	0.6355	0.250	0.125	129.0	132.0	111.0	120.0	142.0	149.0
J062	chr4	39463605	39465284	FALSE	LOW_COUNTS_INDEP_FILTER	0.4	0.701	0.3999	NA	NA	NA	0.0	0.0	2.0	0.0	0.0	0.0
J063	chr4	39463605	39466016	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.103	0.9486	NA	NA	NA	0.0	2.0	1.0	1.0	2.0	0.0
J064	chr4	39463605	39467517	FALSE	LOW_COUNTS_INDEP_FILTER	1.9	0.0483	0.5052	NA	NA	NA	3.0	1.0	1.0	3.0	1.0	3.0
J065	chr4	39463605	39470018	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.373	0.5091	NA	NA	NA	5.0	0.0	5.0	1.0	0.0	4.0
J066	chr4	39465202	39465284	TRUE	OK	110.5	0.00495	0.04939	0.5311	0.312	0.156	122.0	83.0	104.0	115.0	116.0	125.0
J067	chr4	39465342	39466016	FALSE	LOW_COUNTS_INDEP_FILTER	2.4	0.0367	0.3838	NA	NA	NA	4.0	1.0	1.0	3.0	3.0	3.0
J068	chr4	39465342	39467517	TRUE	OK	88.3	0.00178	0.08019	0.6029	0.249	0.124	97.0	80.0	76.0	90.0	102.0	87.0
J069	chr4	39465342	39470018	TRUE	OK	10.0	0.0337	0.6474	0.9	-0.225	-0.112	14.0	13.0	7.0	8.0	5.0	14.0
J070	chr4	39466117	39467517	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.279	0.7012	NA	NA	NA	5.0	1.0	0.0	3.0	4.0	0.0
J071	chr4	39467646	39468118	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.629	0.639	NA	NA	NA	0.0	3.0	0.0	0.0	0.0	1.0
J072	chr4	39467646	39470018	TRUE	OK	98.3	0.0133	0.2409	0.7456	0.285	0.143	97.0	95.0	85.0	119.0	123.0	72.0
J073	chr4	39468427	39470018	TRUE	OK	11.7	0.0287	0.4799	0.8405	-0.325	-0.162	9.0	17.0	14.0	13.0	9.0	8.0
J074	chr4	39470164	39471235	TRUE	OK	117.3	0.00247	0.4184	0.8177	0.102	0.051	158.0	100.0	99.0	117.0	126.0	112.0
J075	chr4	39470624	39471235	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J076	chr4	39471306	39473099	TRUE	OK	113.1	0.00254	0.4349	0.8239	0.100	0.050	144.0	107.0	93.0	111.0	109.0	122.0
J077	chr4	39471306	39477062	TRUE	OK	11.2	0.0314	0.2505	0.7497	0.533	0.267	13.0	8.0	8.0	20.0	9.0	10.0
J078	chr4	39473211	39477062	TRUE	OK	118.7	0.0015	0.0201	0.388	0.291	0.145	127.0	106.0	102.0	123.0	138.0	119.0
J079	chr4	39473211	39484403	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J080	chr4	39473993	39474879	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N081	chr4	39458440	39458890	TRUE	OK	4762.0	0.000829	1.083e-34	9.339e-31	-0.690	-0.344	6397.0	5067.0	4677.0	4060.0	4640.0	4008.0
N082	chr4	39458598	39458890	TRUE	OK	49.1	0.00311	0.007643	0.2524	0.510	0.255	45.0	45.0	37.0	57.0	55.0	56.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000121897.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE