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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr4 | 39458586 | 39459003 | TRUE | OK | 6171.3 | 0.00136 | 5.286e-07 | 0.0002111 | -0.363 | -0.179 | 6377.6 | 5965.2 |
E002 | chr4 | 39459003 | 39459030 | TRUE | OK | 4.0 | 0.0481 | 0.5951 | 0.8818 | 0.347 | 0.173 | 3.6 | 4.4 |
E003 | chr4 | 39459030 | 39459044 | TRUE | OK | 3.8 | 0.0567 | 0.7225 | 0.9246 | 0.232 | 0.116 | 3.6 | 4.1 |
E004 | chr4 | 39459044 | 39459057 | TRUE | OK | 5.1 | 0.0291 | 0.9657 | 0.9926 | 0.014 | 0.007 | 5.2 | 5.1 |
E005 | chr4 | 39459057 | 39459062 | TRUE | OK | 5.8 | 0.0307 | 0.7254 | 0.9253 | 0.191 | 0.095 | 5.5 | 6.1 |
E006 | chr4 | 39459062 | 39459065 | TRUE | OK | 6.0 | 0.0256 | 0.8409 | 0.9594 | 0.106 | 0.053 | 5.8 | 6.1 |
E007 | chr4 | 39459065 | 39459086 | TRUE | OK | 25.9 | 0.0438 | 0.6214 | 0.8909 | 0.229 | 0.114 | 24.4 | 27.7 |
E008 | chr4 | 39459086 | 39459092 | TRUE | OK | 24.7 | 0.0471 | 0.6992 | 0.917 | 0.178 | 0.089 | 23.7 | 26.0 |
E009 | chr4 | 39459092 | 39459101 | TRUE | OK | 40.4 | 0.0377 | 0.6251 | 0.8923 | 0.218 | 0.109 | 38.0 | 42.9 |
E010 | chr4 | 39459101 | 39459108 | TRUE | OK | 44.7 | 0.0374 | 0.6459 | 0.8996 | 0.200 | 0.100 | 42.4 | 47.3 |
E011 | chr4 | 39459108 | 39459113 | TRUE | OK | 48.7 | 0.0337 | 0.4757 | 0.8387 | 0.273 | 0.137 | 45.0 | 52.7 |
E012 | chr4 | 39459113 | 39459119 | TRUE | OK | 63.6 | 0.0316 | 0.4975 | 0.8466 | 0.228 | 0.114 | 59.8 | 67.9 |
E013 | chr4 | 39459119 | 39459162 | TRUE | OK | 104.8 | 0.0346 | 0.4475 | 0.8285 | 0.276 | 0.138 | 96.7 | 113.3 |
E014 | chr4 | 39459162 | 39459241 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.19 | 0.8418 | NA | NA | NA | NA | NA |
E015 | chr4 | 39460789 | 39460872 | TRUE | OK | 166.0 | 0.0203 | 0.5712 | 0.8737 | 0.156 | 0.078 | 159.9 | 172.5 |
E016 | chr4 | 39460872 | 39460873 | TRUE | OK | 150.0 | 0.0177 | 0.6779 | 0.9103 | 0.103 | 0.052 | 147.2 | 153.2 |
E017 | chr4 | 39460873 | 39460962 | TRUE | OK | 217.9 | 0.00867 | 0.2239 | 0.7372 | 0.207 | 0.104 | 206.3 | 230.1 |
E018 | chr4 | 39462195 | 39462217 | TRUE | OK | 153.9 | 0.00289 | 0.0394 | 0.4961 | 0.265 | 0.132 | 142.4 | 165.3 |
E019 | chr4 | 39462217 | 39462289 | TRUE | OK | 194.9 | 0.00352 | 0.06592 | 0.5744 | 0.236 | 0.118 | 182.1 | 207.3 |
E020 | chr4 | 39463524 | 39463605 | TRUE | OK | 203.5 | 0.00257 | 0.006702 | 0.2361 | 0.319 | 0.159 | 184.4 | 221.9 |
E021 | chr4 | 39463605 | 39464163 | TRUE | OK | 27.8 | 0.00648 | 0.0006229 | 0.05759 | 0.906 | 0.453 | 19.8 | 35.9 |
E022 | chr4 | 39464163 | 39464238 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.228 | 0.8047 | NA | NA | NA | NA | NA |
E023 | chr4 | 39465045 | 39465202 | TRUE | OK | 216.9 | 0.00334 | 0.01939 | 0.383 | 0.291 | 0.146 | 198.6 | 234.4 |
E024 | chr4 | 39465284 | 39465342 | TRUE | OK | 163.0 | 0.00197 | 0.02557 | 0.4262 | 0.260 | 0.130 | 151.1 | 174.8 |
E025 | chr4 | 39466016 | 39466072 | TRUE | OK | 7.7 | 0.0179 | 0.6975 | 0.9163 | 0.171 | 0.085 | 7.4 | 8.1 |
E026 | chr4 | 39466072 | 39466117 | TRUE | OK | 9.0 | 0.0183 | 0.3826 | 0.8032 | 0.373 | 0.187 | 8.1 | 10.1 |
E027 | chr4 | 39466117 | 39467324 | TRUE | OK | 32.4 | 0.0142 | 0.2204 | 0.7355 | 0.346 | 0.173 | 29.1 | 35.8 |
E028 | chr4 | 39467517 | 39467646 | TRUE | OK | 169.2 | 0.00225 | 0.05425 | 0.5451 | 0.231 | 0.115 | 158.3 | 179.6 |
E029 | chr4 | 39467646 | 39468118 | TRUE | OK | 37.9 | 0.00552 | 0.7644 | 0.9373 | -0.080 | -0.040 | 39.8 | 36.5 |
E030 | chr4 | 39468118 | 39468427 | TRUE | OK | 32.9 | 0.0134 | 0.1639 | 0.6989 | -0.396 | -0.198 | 37.5 | 27.7 |
E031 | chr4 | 39468873 | 39469228 | TRUE | OK | 20.7 | 0.0207 | 0.204 | 0.7255 | 0.432 | 0.216 | 18.1 | 23.6 |
E032 | chr4 | 39469228 | 39470018 | TRUE | OK | 35.5 | 0.00511 | 0.171 | 0.7042 | 0.310 | 0.155 | 32.4 | 38.9 |
E033 | chr4 | 39470018 | 39470164 | TRUE | OK | 216.2 | 0.00271 | 0.1109 | 0.6498 | 0.188 | 0.094 | 205.8 | 226.6 |
E034 | chr4 | 39470547 | 39470624 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.105 | 0.6499 | NA | NA | NA | NA | NA |
E035 | chr4 | 39471235 | 39471306 | TRUE | OK | 170.7 | 0.00266 | 0.1241 | 0.6644 | 0.183 | 0.091 | 163.2 | 179.2 |
E036 | chr4 | 39473099 | 39473106 | TRUE | OK | 120.5 | 0.00306 | 0.4442 | 0.8274 | 0.100 | 0.050 | 118.4 | 123.1 |
E037 | chr4 | 39473106 | 39473211 | TRUE | OK | 175.6 | 0.00173 | 0.1606 | 0.6964 | 0.153 | 0.077 | 169.4 | 182.3 |
E038 | chr4 | 39473211 | 39473653 | TRUE | OK | 7.0 | 0.0373 | 0.2399 | 0.7452 | 0.665 | 0.332 | 5.5 | 8.5 |
E039 | chr4 | 39473653 | 39473993 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0618 | 0.02211 | NA | NA | NA | NA | NA |
E040 | chr4 | 39474879 | 39477062 | TRUE | OK | 17.6 | 0.0101 | 0.1376 | 0.677 | 0.489 | 0.245 | 14.9 | 20.3 |
E041 | chr4 | 39477062 | 39477075 | TRUE | OK | 139.5 | 0.00213 | 0.01433 | 0.3385 | 0.306 | 0.153 | 127.1 | 151.8 |
E042 | chr4 | 39477075 | 39477160 | TRUE | OK | 185.8 | 0.00186 | 0.001607 | 0.106 | 0.353 | 0.177 | 166.4 | 204.9 |
E043 | chr4 | 39477160 | 39477336 | TRUE | OK | 208.7 | 0.00211 | 9.164e-06 | 0.002265 | 0.500 | 0.250 | 176.8 | 240.2 |
E044 | chr4 | 39477336 | 39477390 | TRUE | OK | 117.0 | 0.00454 | 8.348e-07 | 0.0003071 | 0.789 | 0.395 | 87.8 | 146.0 |
E045 | chr4 | 39477390 | 39477414 | TRUE | OK | 93.7 | 0.00499 | 2.817e-07 | 0.0001217 | 0.892 | 0.446 | 67.1 | 119.9 |
E046 | chr4 | 39477414 | 39477532 | TRUE | OK | 91.3 | 0.00358 | 6.269e-10 | 5.415e-07 | 1.005 | 0.503 | 62.2 | 120.2 |
E047 | chr4 | 39477532 | 39477536 | TRUE | OK | 23.6 | 0.0278 | 0.0002918 | 0.03421 | 1.348 | 0.674 | 13.8 | 33.9 |
E048 | chr4 | 39477536 | 39477584 | TRUE | OK | 24.5 | 0.0308 | 0.0004944 | 0.04924 | 1.328 | 0.664 | 14.4 | 34.9 |
E049 | chr4 | 39477584 | 39477618 | TRUE | OK | 12.1 | 0.0342 | 0.02482 | 0.422 | 1.007 | 0.504 | 8.3 | 16.2 |
E050 | chr4 | 39477618 | 39477648 | TRUE | OK | 4.9 | 0.0445 | 0.4074 | 0.8131 | 0.505 | 0.253 | 4.2 | 5.7 |
E051 | chr4 | 39477648 | 39479300 | TRUE | OK | 13.5 | 0.0357 | 0.5253 | 0.8571 | 0.230 | 0.115 | 12.8 | 14.5 |
E052 | chr4 | 39479300 | 39479506 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.102 | 0.6542 | NA | NA | NA | NA | NA |
E053 | chr4 | 39484403 | 39485109 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.906 | 0.7404 | NA | NA | NA | NA | NA |
J054 | chr4 | 39459162 | 39460789 | TRUE | OK | 103.5 | 0.0379 | 0.4098 | 0.8141 | 0.308 | 0.154 | 94.3 | 113.0 |
J055 | chr4 | 39459241 | 39460789 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J056 | chr4 | 39460962 | 39462195 | TRUE | OK | 136.0 | 0.00209 | 0.05364 | 0.5434 | 0.240 | 0.120 | 127.0 | 145.1 |
J057 | chr4 | 39460962 | 39463524 | TRUE | OK | 16.1 | 0.0076 | 0.9889 | 0.9979 | -0.014 | -0.007 | 16.5 | 15.9 |
J058 | chr4 | 39460962 | 39465045 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.4 | 0.14 | 0.1714 | NA | NA | NA | NA | NA |
J059 | chr4 | 39460962 | 39467517 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.252 | 0.2606 | NA | NA | NA | NA | NA |
J060 | chr4 | 39462289 | 39463524 | TRUE | OK | 138.1 | 0.00223 | 0.04573 | 0.5198 | 0.253 | 0.126 | 127.9 | 147.4 |
J061 | chr4 | 39463605 | 39465045 | TRUE | OK | 130.2 | 0.00452 | 0.1002 | 0.6355 | 0.250 | 0.125 | 120.8 | 139.1 |
J062 | chr4 | 39463605 | 39465284 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.4 | 0.701 | 0.3999 | NA | NA | NA | NA | NA |
J063 | chr4 | 39463605 | 39466016 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.103 | 0.9486 | NA | NA | NA | NA | NA |
J064 | chr4 | 39463605 | 39467517 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.9 | 0.0483 | 0.5052 | NA | NA | NA | NA | NA |
J065 | chr4 | 39463605 | 39470018 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.373 | 0.5091 | NA | NA | NA | NA | NA |
J066 | chr4 | 39465202 | 39465284 | TRUE | OK | 110.5 | 0.00495 | 0.04939 | 0.5311 | 0.312 | 0.156 | 100.3 | 120.4 |
J067 | chr4 | 39465342 | 39466016 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.4 | 0.0367 | 0.3838 | NA | NA | NA | NA | NA |
J068 | chr4 | 39465342 | 39467517 | TRUE | OK | 88.3 | 0.00178 | 0.08019 | 0.6029 | 0.249 | 0.124 | 82.0 | 94.4 |
J069 | chr4 | 39465342 | 39470018 | TRUE | OK | 10.0 | 0.0337 | 0.6474 | 0.9 | -0.225 | -0.112 | 11.0 | 9.1 |
J070 | chr4 | 39466117 | 39467517 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.279 | 0.7012 | NA | NA | NA | NA | NA |
J071 | chr4 | 39467646 | 39468118 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.629 | 0.639 | NA | NA | NA | NA | NA |
J072 | chr4 | 39467646 | 39470018 | TRUE | OK | 98.3 | 0.0133 | 0.2409 | 0.7456 | 0.285 | 0.143 | 90.1 | 106.3 |
J073 | chr4 | 39468427 | 39470018 | TRUE | OK | 11.7 | 0.0287 | 0.4799 | 0.8405 | -0.325 | -0.162 | 13.1 | 10.1 |
J074 | chr4 | 39470164 | 39471235 | TRUE | OK | 117.3 | 0.00247 | 0.4184 | 0.8177 | 0.102 | 0.051 | 115.4 | 120.1 |
J075 | chr4 | 39470624 | 39471235 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J076 | chr4 | 39471306 | 39473099 | TRUE | OK | 113.1 | 0.00254 | 0.4349 | 0.8239 | 0.100 | 0.050 | 111.3 | 115.6 |
J077 | chr4 | 39471306 | 39477062 | TRUE | OK | 11.2 | 0.0314 | 0.2505 | 0.7497 | 0.533 | 0.267 | 9.4 | 13.2 |
J078 | chr4 | 39473211 | 39477062 | TRUE | OK | 118.7 | 0.0015 | 0.0201 | 0.388 | 0.291 | 0.145 | 108.6 | 128.5 |
J079 | chr4 | 39473211 | 39484403 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J080 | chr4 | 39473993 | 39474879 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
N081 | chr4 | 39458440 | 39458890 | TRUE | OK | 4762.0 | 0.000829 | 1.083e-34 | 9.339e-31 | -0.690 | -0.344 | 5221.2 | 4303.3 |
N082 | chr4 | 39458598 | 39458890 | TRUE | OK | 49.1 | 0.00311 | 0.007643 | 0.2524 | 0.510 | 0.255 | 41.2 | 56.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000121897.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |