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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr11 | 119015711 | 119015716 | TRUE | OK | 938.9 | 0.00354 | 0.1007 | 0.6361 | -0.153 | -0.077 | 947.7 | 956.2 | 946.7 | 763.0 | 1262.3 | 757.5 |
E002 | chr11 | 119015716 | 119015725 | TRUE | OK | 1471.0 | 0.0038 | 0.09625 | 0.6299 | -0.159 | -0.080 | 1516.6 | 1495.6 | 1460.0 | 1239.3 | 1946.3 | 1168.1 |
E003 | chr11 | 119015725 | 119015758 | TRUE | OK | 3022.0 | 0.00737 | 0.7128 | 0.9213 | 0.076 | 0.038 | 3074.1 | 2813.0 | 2599.5 | 2724.7 | 4356.7 | 2564.1 |
E004 | chr11 | 119015840 | 119015939 | TRUE | OK | 15726.2 | 0.00876 | 0.1398 | 0.6789 | 0.256 | 0.128 | 15007.2 | 14287.8 | 13432.2 | 14864.8 | 22621.3 | 14144.0 |
E005 | chr11 | 119017360 | 119017361 | TRUE | OK | 179.1 | 0.00774 | 0.02846 | 0.4433 | 0.379 | 0.189 | 117.7 | 179.2 | 150.8 | 155.2 | 270.3 | 201.7 |
E006 | chr11 | 119017361 | 119017433 | TRUE | OK | 21232.2 | 0.00917 | 0.07077 | 0.5845 | 0.312 | 0.156 | 19973.2 | 19810.9 | 18041.5 | 20176.8 | 29881.7 | 19509.3 |
E007 | chr11 | 119017433 | 119017545 | TRUE | OK | 37737.6 | 0.00934 | 0.8669 | 0.9669 | -0.024 | -0.012 | 35040.9 | 37762.0 | 36052.0 | 34503.0 | 48064.6 | 35003.0 |
E008 | chr11 | 119017545 | 119017697 | TRUE | OK | 708.8 | 0.00357 | 2.696e-17 | 7.797e-14 | 0.918 | 0.459 | 436.7 | 539.4 | 430.1 | 883.5 | 1084.2 | 878.6 |
E009 | chr11 | 119017697 | 119017799 | TRUE | OK | 259.2 | 0.00651 | 0.0003048 | 0.03524 | 0.538 | 0.269 | 195.3 | 234.6 | 175.1 | 282.6 | 344.6 | 322.8 |
E010 | chr11 | 119017799 | 119017924 | TRUE | OK | 274.3 | 0.0109 | 0.004303 | 0.187 | 0.522 | 0.261 | 235.4 | 224.7 | 184.0 | 288.6 | 350.9 | 362.1 |
E011 | chr11 | 119017924 | 119017957 | TRUE | OK | 282.5 | 0.00613 | 0.0457 | 0.5197 | 0.287 | 0.143 | 263.6 | 234.6 | 231.7 | 272.8 | 360.3 | 331.9 |
E012 | chr11 | 119017957 | 119018044 | TRUE | OK | 31561.8 | 0.00586 | 0.006018 | 0.223 | -0.384 | -0.191 | 29996.4 | 32801.1 | 31209.9 | 28491.2 | 37611.4 | 29260.4 |
E013 | chr11 | 119018044 | 119018053 | TRUE | OK | 19088.0 | 0.00493 | 0.01555 | 0.3508 | -0.309 | -0.154 | 18619.5 | 20307.8 | 19401.7 | 17359.2 | 21309.8 | 17530.2 |
E014 | chr11 | 119018053 | 119018281 | TRUE | OK | 1377.9 | 0.0213 | 0.97 | 0.9936 | -0.054 | -0.027 | 881.1 | 1522.3 | 1644.0 | 1108.9 | 1697.0 | 1414.2 |
E015 | chr11 | 119018281 | 119018330 | TRUE | OK | 18743.6 | 0.00474 | 0.01484 | 0.3433 | -0.304 | -0.152 | 18285.1 | 19933.7 | 19061.4 | 17061.7 | 20949.4 | 17170.1 |
E016 | chr11 | 119018330 | 119018343 | TRUE | OK | 1985.1 | 0.000418 | 0.04605 | 0.5208 | 0.087 | 0.043 | 1769.9 | 1932.1 | 1846.8 | 1839.2 | 2622.0 | 1900.4 |
E017 | chr11 | 119018343 | 119018666 | TRUE | OK | 1572.6 | 0.000579 | 0.02547 | 0.4254 | 0.114 | 0.057 | 1395.5 | 1489.7 | 1466.6 | 1461.7 | 2119.1 | 1503.0 |
E018 | chr11 | 119018666 | 119018678 | TRUE | OK | 29.0 | 0.00575 | 0.9532 | 0.9896 | 0.013 | 0.006 | 25.6 | 27.7 | 29.9 | 23.7 | 35.6 | 31.3 |
E019 | chr11 | 119018678 | 119018691 | TRUE | OK | 9.4 | 0.0169 | 0.8466 | 0.961 | -0.101 | -0.050 | 9.4 | 12.9 | 5.5 | 9.9 | 9.4 | 9.1 |
J020 | chr11 | 119015758 | 119015840 | TRUE | OK | 2998.8 | 0.00717 | 0.6995 | 0.9171 | 0.078 | 0.039 | 3044.3 | 2794.2 | 2578.5 | 2703.9 | 4321.0 | 2551.0 |
J021 | chr11 | 119015939 | 119017361 | TRUE | OK | 15513.4 | 0.00889 | 0.1799 | 0.7103 | 0.236 | 0.118 | 14904.8 | 14157.2 | 13265.9 | 14580.2 | 22245.2 | 13927.2 |
J022 | chr11 | 119017433 | 119017957 | TRUE | OK | 99.2 | 0.00443 | 0.1267 | 0.667 | 0.249 | 0.124 | 93.0 | 95.0 | 70.9 | 102.8 | 144.6 | 88.8 |
J023 | chr11 | 119017545 | 119017924 | TRUE | OK | 73.6 | 0.00435 | 0.7561 | 0.9348 | -0.054 | -0.027 | 70.8 | 60.4 | 85.4 | 62.3 | 94.3 | 68.6 |
J024 | chr11 | 119017545 | 119017957 | TRUE | OK | 28981.7 | 0.00597 | 0.01929 | 0.3823 | -0.327 | -0.163 | 28046.5 | 30059.3 | 28408.6 | 26356.5 | 34363.0 | 26656.0 |
J025 | chr11 | 119017799 | 119017957 | TRUE | OK | 23.5 | 0.019 | 0.3202 | 0.7794 | -0.356 | -0.178 | 16.2 | 29.7 | 31.0 | 24.7 | 21.0 | 18.2 |
J026 | chr11 | 119018053 | 119018281 | TRUE | OK | 18550.1 | 0.00452 | 0.01299 | 0.3241 | -0.303 | -0.151 | 18097.5 | 19746.6 | 18855.2 | 16876.9 | 20730.5 | 16993.6 |
N027 | chr11 | 119017545 | 119018281 | TRUE | OK | 37.0 | 0.00451 | 0.8719 | 0.9682 | 0.039 | 0.019 | 34.1 | 38.6 | 32.1 | 38.5 | 52.4 | 26.2 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000118181.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |