<< | < Prev Gene | TOP | Next Gene > | >> |
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr19 | 39433136 | 39433206 | TRUE | OK | 72.7 | 0.00334 | 0.6072 | 0.8861 | 0.084 | 0.042 | 77.0 | 68.0 | 64.0 | 59.0 | 93.0 | 76.0 |
E002 | chr19 | 39433206 | 39433216 | TRUE | OK | 533.8 | 0.004 | 0.1166 | 0.6565 | -0.169 | -0.085 | 684.0 | 544.0 | 462.0 | 431.0 | 693.0 | 413.0 |
E003 | chr19 | 39433216 | 39433222 | TRUE | OK | 562.5 | 0.00401 | 0.1127 | 0.6513 | -0.168 | -0.084 | 713.0 | 576.0 | 490.0 | 455.0 | 735.0 | 430.0 |
E004 | chr19 | 39433222 | 39433252 | TRUE | OK | 2160.8 | 0.00569 | 0.2393 | 0.7448 | 0.170 | 0.085 | 2460.0 | 2034.0 | 1599.0 | 2015.0 | 3107.0 | 1819.0 |
E005 | chr19 | 39433252 | 39433259 | TRUE | OK | 2435.4 | 0.00592 | 0.1457 | 0.6846 | 0.207 | 0.103 | 2769.0 | 2252.0 | 1763.0 | 2282.0 | 3528.0 | 2098.0 |
E006 | chr19 | 39433259 | 39433418 | TRUE | OK | 23321.4 | 0.00274 | 0.8176 | 0.9527 | 0.031 | 0.015 | 26478.0 | 22227.0 | 20267.0 | 21273.0 | 30331.0 | 19907.0 |
E007 | chr19 | 39433418 | 39433493 | TRUE | OK | 71.3 | 0.00788 | 0.0003571 | 0.03927 | 0.728 | 0.364 | 65.0 | 38.0 | 55.0 | 88.0 | 108.0 | 73.0 |
E008 | chr19 | 39433493 | 39433517 | TRUE | OK | 73.8 | 0.00422 | 0.1211 | 0.6612 | 0.261 | 0.130 | 87.0 | 57.0 | 56.0 | 77.0 | 96.0 | 73.0 |
E009 | chr19 | 39433517 | 39433521 | TRUE | OK | 436.2 | 0.00688 | 0.2598 | 0.7533 | 0.160 | 0.080 | 375.0 | 467.0 | 369.0 | 385.0 | 585.0 | 429.0 |
E010 | chr19 | 39433521 | 39433569 | TRUE | OK | 30132.0 | 0.00378 | 0.719 | 0.9235 | -0.033 | -0.017 | 34708.0 | 28903.0 | 26528.0 | 27552.0 | 38102.0 | 25805.0 |
E011 | chr19 | 39433569 | 39433664 | TRUE | OK | 285.1 | 0.00255 | 2.218e-11 | 2.636e-08 | 0.746 | 0.373 | 223.0 | 191.0 | 211.0 | 321.0 | 460.0 | 296.0 |
E012 | chr19 | 39433664 | 39433761 | TRUE | OK | 39547.0 | 0.00868 | 0.3745 | 0.8003 | -0.149 | -0.074 | 45936.0 | 38389.0 | 34995.0 | 36201.0 | 48541.0 | 34385.0 |
E013 | chr19 | 39433761 | 39434390 | TRUE | OK | 1017.1 | 0.00226 | 4.124e-19 | 1.498e-15 | 0.775 | 0.388 | 830.0 | 721.0 | 670.0 | 1168.0 | 1479.0 | 1224.0 |
E014 | chr19 | 39434390 | 39435606 | TRUE | OK | 868.7 | 0.0134 | 0.2847 | 0.7646 | 0.180 | 0.090 | 1048.0 | 794.0 | 607.0 | 862.0 | 967.0 | 986.0 |
E015 | chr19 | 39435606 | 39435657 | TRUE | OK | 37188.8 | 0.00518 | 0.2554 | 0.7516 | -0.163 | -0.081 | 42667.0 | 36798.0 | 33070.0 | 33919.0 | 44637.0 | 33089.0 |
E016 | chr19 | 39435657 | 39435705 | TRUE | OK | 32353.6 | 0.00426 | 0.1429 | 0.6823 | -0.182 | -0.091 | 37610.0 | 32308.0 | 28800.0 | 29372.0 | 38343.0 | 28694.0 |
E017 | chr19 | 39435705 | 39435708 | TRUE | OK | 27650.4 | 0.0042 | 0.1096 | 0.648 | -0.193 | -0.096 | 32725.0 | 27679.0 | 24665.0 | 25046.0 | 32315.0 | 24434.0 |
E018 | chr19 | 39435847 | 39435915 | TRUE | OK | 27450.9 | 0.00416 | 0.1077 | 0.6453 | -0.193 | -0.096 | 32492.0 | 27552.0 | 24440.0 | 24856.0 | 32071.0 | 24256.0 |
E019 | chr19 | 39435915 | 39435936 | TRUE | OK | 14652.2 | 0.00282 | 0.09827 | 0.6329 | -0.160 | -0.080 | 17761.0 | 14790.0 | 12957.0 | 13194.0 | 17010.0 | 12792.0 |
E020 | chr19 | 39435936 | 39435941 | TRUE | OK | 473.2 | 0.00383 | 0.3234 | 0.7809 | 0.102 | 0.051 | 547.0 | 465.0 | 352.0 | 459.0 | 587.0 | 450.0 |
E021 | chr19 | 39435941 | 39435948 | TRUE | OK | 410.5 | 0.00555 | 0.3343 | 0.7851 | 0.114 | 0.057 | 471.0 | 414.0 | 294.0 | 404.0 | 500.0 | 399.0 |
E022 | chr19 | 39435948 | 39435949 | TRUE | OK | 315.1 | 0.00615 | 0.3266 | 0.7821 | 0.123 | 0.061 | 366.0 | 307.0 | 229.0 | 327.0 | 373.0 | 304.0 |
J023 | chr19 | 39433418 | 39433493 | TRUE | OK | 22.5 | 0.00541 | 0.7713 | 0.9394 | -0.082 | -0.041 | 29.0 | 22.0 | 18.0 | 16.0 | 29.0 | 22.0 |
J024 | chr19 | 39433418 | 39433517 | TRUE | OK | 3.8 | 0.0247 | 0.614 | 0.8884 | 0.341 | 0.170 | 5.0 | 3.0 | 2.0 | 3.0 | 7.0 | 3.0 |
J025 | chr19 | 39433418 | 39433521 | TRUE | OK | 21601.3 | 0.00224 | 0.7781 | 0.9415 | -0.014 | -0.007 | 24739.0 | 20730.0 | 18990.0 | 19571.0 | 27802.0 | 18312.0 |
J026 | chr19 | 39433569 | 39433664 | TRUE | OK | 25982.8 | 0.0035 | 0.4672 | 0.8358 | -0.076 | -0.038 | 30425.0 | 25079.0 | 22947.0 | 23925.0 | 32059.0 | 22263.0 |
J027 | chr19 | 39433761 | 39435606 | TRUE | OK | 26838.5 | 0.00343 | 0.11 | 0.6486 | -0.171 | -0.085 | 31687.0 | 26358.0 | 24249.0 | 24439.0 | 31864.0 | 23299.0 |
J028 | chr19 | 39433761 | 39435657 | TRUE | OK | 614.8 | 0.00183 | 0.0902 | 0.6208 | -0.155 | -0.077 | 770.0 | 637.0 | 528.0 | 538.0 | 712.0 | 534.0 |
J029 | chr19 | 39435708 | 39435847 | TRUE | OK | 27236.0 | 0.00387 | 0.1001 | 0.6352 | -0.191 | -0.095 | 32219.0 | 27318.0 | 24265.0 | 24661.0 | 31838.0 | 24063.0 |
N030 | chr19 | 39433418 | 39433664 | TRUE | OK | 13.8 | 0.0107 | 0.1724 | 0.7051 | -0.498 | -0.249 | 19.0 | 13.0 | 16.0 | 6.0 | 14.0 | 15.0 |
N031 | chr19 | 39433558 | 39433664 | TRUE | OK | 14.6 | 0.0331 | 0.07637 | 0.5963 | 0.855 | 0.427 | 9.0 | 8.0 | 13.0 | 13.0 | 32.0 | 11.0 |
N032 | chr19 | 39435705 | 39435847 | TRUE | OK | 159.2 | 0.00715 | 0.07339 | 0.5902 | -0.327 | -0.163 | 220.0 | 183.0 | 130.0 | 140.0 | 159.0 | 136.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000105193.9 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |