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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr15 | 72199028 | 72199031 | TRUE | OK | 119.4 | 0.00506 | 0.2831 | 0.764 | -0.176 | -0.088 | 119.1 | 120.4 |
E002 | chr15 | 72199031 | 72199035 | TRUE | OK | 471.9 | 0.00646 | 0.02655 | 0.4325 | -0.328 | -0.164 | 494.6 | 450.3 |
E003 | chr15 | 72199035 | 72199104 | TRUE | OK | 8262.9 | 0.00412 | 0.3786 | 0.8017 | -0.084 | -0.042 | 7946.6 | 8579.1 |
E004 | chr15 | 72199104 | 72199589 | TRUE | OK | 46661.2 | 0.00954 | 0.3207 | 0.7797 | 0.186 | 0.093 | 41238.2 | 52083.4 |
E005 | chr15 | 72199589 | 72199628 | TRUE | OK | 11552.4 | 0.0022 | 0.362 | 0.7958 | 0.077 | 0.038 | 10497.9 | 12607.2 |
E006 | chr15 | 72199628 | 72199756 | TRUE | OK | 18095.3 | 0.00272 | 0.1964 | 0.721 | 0.120 | 0.060 | 16212.9 | 19977.5 |
E007 | chr15 | 72200473 | 72200507 | TRUE | OK | 15124.0 | 0.00294 | 0.1711 | 0.7044 | 0.131 | 0.065 | 13489.2 | 16759.1 |
E008 | chr15 | 72200507 | 72200655 | TRUE | OK | 24751.9 | 0.00243 | 0.9317 | 0.9842 | 0.007 | 0.004 | 23058.4 | 26446.4 |
E009 | chr15 | 72200655 | 72201866 | TRUE | OK | 1327.4 | 0.00828 | 0.02763 | 0.4389 | 0.332 | 0.166 | 1090.6 | 1565.5 |
E010 | chr15 | 72201866 | 72202053 | TRUE | OK | 299.4 | 0.00952 | 0.6073 | 0.8861 | 0.087 | 0.044 | 271.0 | 328.7 |
E011 | chr15 | 72202053 | 72202453 | TRUE | OK | 634.4 | 0.00454 | 0.2625 | 0.7545 | 0.135 | 0.067 | 563.2 | 705.9 |
E012 | chr15 | 72202453 | 72202532 | TRUE | OK | 24117.9 | 0.00403 | 0.172 | 0.7048 | -0.149 | -0.074 | 23620.3 | 24616.5 |
E013 | chr15 | 72202532 | 72202620 | TRUE | OK | 29177.3 | 0.00434 | 0.04005 | 0.4985 | -0.230 | -0.115 | 29246.3 | 29108.7 |
E014 | chr15 | 72202620 | 72202689 | TRUE | OK | 491.7 | 0.00304 | 0.0003552 | 0.0391 | 0.379 | 0.190 | 395.6 | 587.3 |
E015 | chr15 | 72202689 | 72203021 | TRUE | OK | 414.0 | 0.00761 | 0.7525 | 0.9337 | 0.045 | 0.022 | 380.6 | 448.3 |
E016 | chr15 | 72203021 | 72203188 | TRUE | OK | 966.6 | 0.00412 | 0.1002 | 0.6355 | 0.180 | 0.090 | 843.6 | 1091.1 |
E017 | chr15 | 72203188 | 72204559 | TRUE | OK | 972.2 | 0.0123 | 0.6888 | 0.9139 | -0.070 | -0.035 | 931.6 | 1013.5 |
E018 | chr15 | 72206258 | 72206674 | TRUE | OK | 255.5 | 0.00733 | 0.3628 | 0.7961 | -0.154 | -0.077 | 252.6 | 259.3 |
E019 | chr15 | 72206674 | 72206727 | TRUE | OK | 129.5 | 0.0129 | 0.2975 | 0.7705 | -0.224 | -0.112 | 131.2 | 128.3 |
E020 | chr15 | 72206727 | 72206798 | TRUE | OK | 28202.2 | 0.00436 | 0.06079 | 0.5617 | -0.211 | -0.105 | 28115.8 | 28289.2 |
E021 | chr15 | 72206798 | 72206854 | TRUE | OK | 31854.6 | 0.00311 | 0.1057 | 0.6431 | -0.153 | -0.077 | 31178.9 | 32530.6 |
E022 | chr15 | 72206854 | 72206880 | TRUE | OK | 30091.4 | 0.00203 | 0.0676 | 0.5779 | -0.140 | -0.070 | 29346.8 | 30835.7 |
E023 | chr15 | 72207126 | 72207167 | TRUE | OK | 35955.7 | 0.00166 | 0.1233 | 0.6636 | -0.107 | -0.054 | 34678.9 | 37232.3 |
E024 | chr15 | 72207167 | 72207277 | TRUE | OK | 51673.7 | 0.00251 | 0.4369 | 0.8247 | -0.068 | -0.034 | 49165.6 | 54182.1 |
E025 | chr15 | 72208616 | 72208620 | TRUE | OK | 347.6 | 0.00692 | 0.002098 | 0.1245 | 0.471 | 0.236 | 269.4 | 426.2 |
E026 | chr15 | 72208620 | 72208665 | TRUE | OK | 46188.1 | 0.00357 | 0.6407 | 0.8981 | -0.050 | -0.025 | 43749.2 | 48627.6 |
E027 | chr15 | 72208665 | 72208842 | TRUE | OK | 57945.1 | 0.0032 | 0.952 | 0.9894 | 0.002 | 0.001 | 54075.7 | 61814.8 |
E028 | chr15 | 72208842 | 72208891 | TRUE | OK | 28825.3 | 0.00163 | 0.916 | 0.98 | 0.005 | 0.002 | 26873.1 | 30777.7 |
E029 | chr15 | 72208891 | 72208962 | TRUE | OK | 454.0 | 0.0038 | 8.657e-28 | 5.947e-24 | 1.309 | 0.654 | 237.1 | 669.6 |
E030 | chr15 | 72209505 | 72209672 | TRUE | OK | 311.4 | 0.00542 | 0.1064 | 0.6438 | 0.223 | 0.112 | 266.6 | 355.4 |
E031 | chr15 | 72209672 | 72209732 | TRUE | OK | 29012.8 | 0.00215 | 0.7297 | 0.9265 | -0.030 | -0.015 | 27344.7 | 30681.0 |
E032 | chr15 | 72209732 | 72209750 | TRUE | OK | 22086.7 | 0.0035 | 0.493 | 0.8449 | -0.070 | -0.035 | 21103.9 | 23069.8 |
E033 | chr15 | 72209750 | 72209782 | TRUE | OK | 24270.6 | 0.00296 | 0.713 | 0.9213 | -0.036 | -0.018 | 22930.9 | 25610.6 |
E034 | chr15 | 72209782 | 72209844 | TRUE | OK | 25467.5 | 0.00263 | 0.511 | 0.852 | -0.059 | -0.030 | 24236.5 | 26698.8 |
E035 | chr15 | 72209844 | 72209859 | TRUE | OK | 18312.1 | 0.0026 | 0.6572 | 0.9034 | -0.041 | -0.020 | 17333.3 | 19291.5 |
E036 | chr15 | 72209859 | 72210026 | TRUE | OK | 48.6 | 0.0128 | 3.201e-07 | 0.000136 | 1.341 | 0.670 | 25.1 | 72.6 |
E037 | chr15 | 72210059 | 72210346 | TRUE | OK | 40.4 | 0.0163 | 0.1722 | 0.7049 | 0.385 | 0.192 | 32.6 | 48.6 |
E038 | chr15 | 72210346 | 72210478 | TRUE | OK | 29095.6 | 0.00277 | 0.6332 | 0.8953 | -0.045 | -0.023 | 27558.9 | 30632.5 |
E039 | chr15 | 72217408 | 72217451 | TRUE | OK | 23112.8 | 0.00356 | 0.5304 | 0.8588 | -0.066 | -0.033 | 22050.1 | 24175.7 |
E040 | chr15 | 72217451 | 72217483 | TRUE | OK | 22611.9 | 0.00414 | 0.4693 | 0.8366 | -0.081 | -0.040 | 21677.5 | 23546.6 |
E041 | chr15 | 72217483 | 72217500 | TRUE | OK | 19473.6 | 0.00586 | 0.3412 | 0.7875 | -0.124 | -0.062 | 18942.1 | 20005.4 |
E042 | chr15 | 72218942 | 72218943 | TRUE | OK | 188.2 | 0.0101 | 0.2123 | 0.7308 | 0.239 | 0.120 | 160.3 | 216.0 |
E043 | chr15 | 72218943 | 72218978 | TRUE | OK | 20625.7 | 0.0071 | 0.3173 | 0.7782 | -0.142 | -0.071 | 20174.3 | 21077.5 |
E044 | chr15 | 72218978 | 72219110 | TRUE | OK | 21428.1 | 0.00901 | 0.1845 | 0.7137 | -0.210 | -0.105 | 21405.4 | 21451.1 |
E045 | chr15 | 72219389 | 72219425 | TRUE | OK | 3.7 | 0.181 | 0.06318 | 0.5677 | 2.029 | 1.014 | 1.3 | 6.0 |
E046 | chr15 | 72221167 | 72221284 | TRUE | OK | 35.7 | 0.0176 | 0.3549 | 0.7932 | 0.290 | 0.145 | 29.8 | 41.6 |
E047 | chr15 | 72222449 | 72222531 | TRUE | OK | 16.1 | 0.0107 | 0.5846 | 0.8784 | -0.185 | -0.093 | 16.2 | 16.2 |
E048 | chr15 | 72228576 | 72228676 | TRUE | OK | 11.4 | 0.0321 | 0.6333 | 0.8953 | 0.209 | 0.104 | 10.0 | 13.2 |
E049 | chr15 | 72229546 | 72229722 | TRUE | OK | 18.8 | 0.00877 | 0.9927 | 0.9989 | -0.005 | -0.002 | 17.5 | 19.9 |
E050 | chr15 | 72230895 | 72230899 | TRUE | OK | 76.9 | 0.0048 | 0.221 | 0.7358 | -0.221 | -0.110 | 77.9 | 76.4 |
E051 | chr15 | 72230899 | 72231113 | TRUE | OK | 160.4 | 0.00313 | 0.6091 | 0.8867 | -0.069 | -0.034 | 153.7 | 167.3 |
E052 | chr15 | 72231113 | 72231115 | TRUE | OK | 106.4 | 0.013 | 0.4886 | 0.8433 | 0.161 | 0.080 | 93.4 | 119.2 |
E053 | chr15 | 72231115 | 72231171 | TRUE | OK | 10582.1 | 0.0145 | 0.1045 | 0.641 | -0.317 | -0.159 | 10984.4 | 10180.0 |
E054 | chr15 | 72231171 | 72231190 | TRUE | OK | 3088.3 | 0.0163 | 0.05861 | 0.5564 | -0.393 | -0.196 | 3297.2 | 2879.6 |
E055 | chr15 | 72231190 | 72231225 | TRUE | OK | 812.6 | 0.011 | 0.04377 | 0.5133 | -0.356 | -0.178 | 858.8 | 766.7 |
E056 | chr15 | 72231225 | 72231323 | TRUE | OK | 49.2 | 0.00442 | 0.02631 | 0.4313 | -0.449 | -0.224 | 53.7 | 45.0 |
E057 | chr15 | 72231323 | 72231386 | TRUE | OK | 97.8 | 0.00691 | 0.4748 | 0.8383 | -0.131 | -0.066 | 95.9 | 100.0 |
E058 | chr15 | 72231386 | 72231391 | TRUE | OK | 51.4 | 0.00443 | 0.04325 | 0.5114 | -0.401 | -0.201 | 55.1 | 47.7 |
E059 | chr15 | 72231391 | 72231598 | TRUE | OK | 44.6 | 0.0157 | 0.109 | 0.6472 | -0.441 | -0.221 | 48.6 | 40.8 |
E060 | chr15 | 72231598 | 72231624 | TRUE | OK | 5.7 | 0.0589 | 0.9671 | 0.993 | -0.046 | -0.023 | 5.5 | 6.1 |
E061 | chr15 | 72231624 | 72231680 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0503 | 0.5229 | NA | NA | NA | NA | NA |
E062 | chr15 | 72231680 | 72231691 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.0806 | 0.9146 | NA | NA | NA | NA | NA |
E063 | chr15 | 72231691 | 72231819 | TRUE | OK | 4.6 | 0.0329 | 0.6278 | 0.8934 | 0.294 | 0.147 | 3.9 | 5.4 |
E064 | chr15 | 72231819 | 72231822 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.133 | 0.5642 | NA | NA | NA | NA | NA |
J065 | chr15 | 72199756 | 72200473 | TRUE | OK | 13312.9 | 0.00258 | 0.2867 | 0.7653 | 0.099 | 0.049 | 12005.2 | 14620.3 |
J066 | chr15 | 72200655 | 72202453 | TRUE | OK | 15290.7 | 0.00376 | 0.243 | 0.7465 | -0.125 | -0.062 | 14889.4 | 15693.3 |
J067 | chr15 | 72200655 | 72203021 | TRUE | OK | 267.4 | 0.00451 | 0.03024 | 0.4537 | 0.298 | 0.149 | 222.5 | 312.2 |
J068 | chr15 | 72202620 | 72206727 | TRUE | OK | 21651.7 | 0.00417 | 0.01563 | 0.3517 | -0.265 | -0.133 | 22001.4 | 21302.4 |
J069 | chr15 | 72203188 | 72206727 | TRUE | OK | 421.9 | 0.0059 | 0.03302 | 0.4673 | 0.293 | 0.147 | 352.1 | 492.6 |
J070 | chr15 | 72206880 | 72207126 | TRUE | OK | 26903.8 | 0.00159 | 0.01812 | 0.3737 | -0.160 | -0.080 | 26422.2 | 27385.0 |
J071 | chr15 | 72207277 | 72208616 | TRUE | OK | 20.9 | 0.0346 | 6.956e-07 | 0.0002625 | 2.264 | 1.132 | 6.5 | 35.4 |
J072 | chr15 | 72207277 | 72208620 | TRUE | OK | 35804.7 | 0.0029 | 0.5577 | 0.8687 | -0.056 | -0.028 | 34004.1 | 37606.0 |
J073 | chr15 | 72208842 | 72218978 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.217 | 0.6312 | NA | NA | NA | NA | NA |
J074 | chr15 | 72208891 | 72209672 | TRUE | OK | 23007.2 | 0.00133 | 0.6569 | 0.9032 | -0.030 | -0.015 | 21691.0 | 24323.3 |
J075 | chr15 | 72209844 | 72217483 | TRUE | OK | 7.6 | 0.02 | 0.9119 | 0.9789 | -0.062 | -0.031 | 7.4 | 8.1 |
J076 | chr15 | 72209859 | 72210346 | TRUE | OK | 16498.0 | 0.00214 | 0.4677 | 0.836 | -0.059 | -0.030 | 15715.8 | 17281.0 |
J077 | chr15 | 72210478 | 72217408 | TRUE | OK | 19054.1 | 0.00256 | 0.6168 | 0.8893 | -0.046 | -0.023 | 18065.3 | 20043.0 |
J078 | chr15 | 72210478 | 72218943 | TRUE | OK | 4.2 | 0.0222 | 0.277 | 0.7614 | 0.698 | 0.349 | 2.9 | 5.4 |
J079 | chr15 | 72217500 | 72218943 | TRUE | OK | 17755.4 | 0.0059 | 0.2683 | 0.7574 | -0.144 | -0.072 | 17389.4 | 18121.7 |
J080 | chr15 | 72219110 | 72219389 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J081 | chr15 | 72219110 | 72221167 | TRUE | OK | 21.8 | 0.00868 | 0.115 | 0.6547 | 0.473 | 0.237 | 16.8 | 26.7 |
J082 | chr15 | 72219110 | 72222449 | TRUE | OK | 9.4 | 0.0295 | 0.2132 | 0.7314 | -0.587 | -0.294 | 10.7 | 8.1 |
J083 | chr15 | 72219110 | 72228576 | TRUE | OK | 6.0 | 0.181 | 0.8831 | 0.9715 | 0.140 | 0.070 | 5.4 | 6.7 |
J084 | chr15 | 72219110 | 72229546 | TRUE | OK | 10.5 | 0.00906 | 0.1403 | 0.6794 | -0.585 | -0.293 | 12.0 | 9.1 |
J085 | chr15 | 72219110 | 72230895 | TRUE | OK | 65.0 | 0.00511 | 0.2139 | 0.7319 | -0.238 | -0.119 | 66.3 | 64.2 |
J086 | chr15 | 72219110 | 72230899 | TRUE | OK | 32.0 | 0.00841 | 0.6208 | 0.8908 | -0.131 | -0.066 | 31.4 | 32.8 |
J087 | chr15 | 72219110 | 72231115 | TRUE | OK | 10506.7 | 0.015 | 0.1067 | 0.6442 | -0.321 | -0.160 | 10918.3 | 10095.3 |
J088 | chr15 | 72219110 | 72231323 | TRUE | OK | 80.1 | 0.0103 | 0.5887 | 0.8797 | -0.114 | -0.057 | 78.1 | 82.4 |
J089 | chr15 | 72219110 | 72231598 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0447 | 0.8895 | NA | NA | NA | NA | NA |
J090 | chr15 | 72219110 | 72231691 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.9 | 0.12 | 0.2419 | NA | NA | NA | NA | NA |
J091 | chr15 | 72221284 | 72230895 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.051 | 0.2662 | NA | NA | NA | NA | NA |
J092 | chr15 | 72221284 | 72231115 | TRUE | OK | 7.9 | 0.0128 | 0.3598 | 0.795 | 0.427 | 0.214 | 6.2 | 9.5 |
J093 | chr15 | 72231391 | 72231598 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.225 | 0.6624 | NA | NA | NA | NA | NA |
N094 | chr15 | 72219110 | 72237390 | TRUE | OK | 18.9 | 0.0179 | 0.9735 | 0.9943 | -0.011 | -0.006 | 17.6 | 19.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000067225.18 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |