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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 154329436 | 154329466 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E002 | chr5 | 154329792 | 154329957 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.303 | 0.5442 | NA | NA | NA | 3.0 | 5.2 | 0.0 | 2.0 | 2.9 | 0.0 |
E003 | chr5 | 154392170 | 154393014 | TRUE | OK | 79.8 | 0.0129 | 0.2079 | 0.7606 | 0.378 | 0.188 | 83.8 | 65.7 | 69.5 | 105.2 | 74.4 | 80.2 |
E004 | chr5 | 154436000 | 154436336 | TRUE | OK | 14.0 | 0.03 | 0.701 | 0.9202 | 0.176 | 0.088 | 14.8 | 9.4 | 14.1 | 9.9 | 13.7 | 22.2 |
E005 | chr5 | 154442996 | 154443361 | TRUE | OK | 15.7 | 0.0323 | 0.5754 | 0.88 | -0.270 | -0.135 | 18.7 | 7.3 | 23.2 | 16.9 | 10.8 | 17.4 |
E006 | chr5 | 154443361 | 154443480 | TRUE | OK | 29.0 | 0.0101 | 0.09735 | 0.6964 | -0.510 | -0.255 | 40.4 | 21.9 | 33.2 | 22.8 | 24.5 | 30.9 |
E007 | chr5 | 154445737 | 154445813 | TRUE | OK | 22.0 | 0.00981 | 0.1548 | 0.7366 | -0.466 | -0.233 | 29.6 | 18.8 | 24.2 | 18.9 | 22.5 | 18.4 |
E008 | chr5 | 154445813 | 154445819 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.208 | 0.7644 | NA | NA | NA | 3.9 | 3.1 | 0.0 | 0.0 | 2.9 | 2.9 |
E009 | chr5 | 154445819 | 154445822 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.45 | 0.6353 | NA | NA | NA | 2.0 | 2.1 | 0.0 | 0.0 | 2.9 | 0.0 |
E010 | chr5 | 154445822 | 154445850 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.99 | 0.4124 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 | 0.0 |
J011 | chr5 | 154329466 | 154329792 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J012 | chr5 | 154329957 | 154443361 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.111 | 0.8368 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 2.0 | 2.0 | 0.0 |
J013 | chr5 | 154393014 | 154443361 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.541 | 0.3808 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
J014 | chr5 | 154436336 | 154443361 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0332 | 0.5247 | NA | NA | NA | 3.9 | 3.1 | 3.0 | 1.0 | 2.9 | 3.9 |
J015 | chr5 | 154443480 | 154445737 | TRUE | OK | 19.9 | 0.00636 | 0.1048 | 0.7023 | -0.517 | -0.258 | 25.6 | 16.7 | 24.2 | 18.9 | 16.6 | 17.4 |
N016 | chr5 | 154298079 | 154329571 | FALSE | ALL_ZERO | 634.2 | NA | NA | NA | NA | NA | 710.9 | 326.4 | 566.1 | 785.3 | 689.4 | 727.1 |
N017 | chr5 | 154376462 | 154380447 | FALSE | ALL_ZERO | 478.7 | NA | NA | NA | NA | NA | 508.8 | 295.1 | 518.7 | 526.2 | 481.8 | 541.4 |
N018 | chr5 | 154380631 | 154386312 | FALSE | ALL_ZERO | 534.3 | NA | NA | NA | NA | NA | 599.5 | 390.0 | 588.2 | 592.7 | 461.2 | 574.3 |
N019 | chr5 | 154386430 | 154390598 | TRUE | OK | 13.6 | 0.00958 | 2.662e-05 | 0.01169 | 1.671 | 0.835 | 8.9 | 2.1 | 9.1 | 22.8 | 17.6 | 21.3 |
N020 | chr5 | 154386430 | 154393264 | TRUE | OK | 13.7 | 0.0109 | 0.6174 | 0.8937 | -0.203 | -0.102 | 21.7 | 10.4 | 10.1 | 15.9 | 11.8 | 12.6 |
N021 | chr5 | 154386430 | 154404103 | FALSE | ALL_ZERO | 473.7 | NA | NA | NA | NA | NA | 517.7 | 360.8 | 514.7 | 538.1 | 399.5 | 511.5 |
N022 | chr5 | 154404211 | 154409540 | FALSE | ALL_ZERO | 504.1 | NA | NA | NA | NA | NA | 583.7 | 331.6 | 518.7 | 590.7 | 476.9 | 523.1 |
N023 | chr5 | 154409762 | 154412888 | FALSE | ALL_ZERO | 446.5 | NA | NA | NA | NA | NA | 509.8 | 300.3 | 435.1 | 528.2 | 418.2 | 487.3 |
N024 | chr5 | 154413005 | 154415782 | FALSE | ALL_ZERO | 492.4 | NA | NA | NA | NA | NA | 563.0 | 293.0 | 466.3 | 577.8 | 493.6 | 560.8 |
N025 | chr5 | 154415932 | 154416813 | FALSE | ALL_ZERO | 518.8 | NA | NA | NA | NA | NA | 621.2 | 348.3 | 510.7 | 582.8 | 521.0 | 528.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000245275.7 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |