<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000089053.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr12	121308244	121308331	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.0357	0.7936	NA	NA	NA	4.9	7.3	4.0	8.9	4.9	2.9
E002	chr12	121308331	121308356	TRUE	OK	12.3	0.0372	0.6871	0.9158	0.147	0.074	6.9	20.9	9.1	12.9	12.7	11.6
E003	chr12	121308356	121308357	TRUE	OK	22.0	0.0306	0.9571	0.99	-0.019	-0.010	12.8	35.5	21.2	21.8	21.5	19.3
E004	chr12	121308357	121308691	TRUE	OK	1505.0	0.0208	0.3659	0.8122	-0.260	-0.130	1364.6	2281.5	1403.1	1286.7	1419.0	1275.3
E005	chr12	121309700	121309863	TRUE	OK	1904.5	0.00924	0.693	0.9176	-0.077	-0.039	1820.2	2457.7	1797.9	1689.7	1927.2	1734.5
E006	chr12	121309863	121309969	TRUE	OK	39.7	0.0126	0.05776	0.6434	0.511	0.256	28.6	33.4	41.3	35.7	57.8	41.6
E007	chr12	121309969	121310011	TRUE	OK	23.4	0.00775	2.627e-05	0.01158	1.231	0.615	11.8	19.8	13.1	29.8	33.3	32.9
E008	chr12	121310011	121310394	TRUE	OK	27.3	0.0419	0.003324	0.2451	1.231	0.616	8.9	25.0	18.1	25.8	50.9	34.8
E009	chr12	121317889	121318154	TRUE	OK	19.3	0.0165	0.002401	0.2107	1.075	0.538	10.8	12.5	16.1	18.9	34.3	23.2
E010	chr12	121318276	121318351	TRUE	OK	1526.2	0.00515	0.525	0.8639	-0.083	-0.041	1545.1	1866.5	1469.5	1337.3	1558.0	1380.6
E011	chr12	121318351	121318404	TRUE	OK	1492.4	0.00446	0.4256	0.8315	-0.095	-0.047	1546.1	1799.7	1443.4	1291.6	1518.9	1354.5
E012	chr12	121318404	121318424	TRUE	OK	1269.0	0.0041	0.2911	0.789	-0.117	-0.059	1326.2	1506.7	1268.1	1080.2	1312.2	1120.6
E013	chr12	121318424	121318500	TRUE	OK	70.6	0.00412	0.05633	0.641	-0.340	-0.170	83.8	91.8	69.5	62.5	56.8	59.0
E014	chr12	121318500	121318534	TRUE	OK	1437.8	0.00301	0.3038	0.7926	-0.099	-0.049	1512.5	1665.2	1442.3	1252.9	1473.8	1280.1
E015	chr12	121318534	121318608	TRUE	OK	1552.9	0.00181	0.5576	0.874	-0.045	-0.023	1686.1	1691.3	1537.0	1397.8	1562.0	1443.5
E016	chr12	121319696	121319818	TRUE	OK	1422.8	0.00211	0.8083	0.9521	0.020	0.010	1530.3	1511.9	1377.9	1331.3	1340.6	1444.5
E017	chr12	121320384	121320459	TRUE	OK	1195.2	0.0033	0.8441	0.9616	-0.019	-0.009	1299.6	1281.5	1174.4	1108.0	1069.4	1238.5
E018	chr12	121320459	121321111	TRUE	OK	25.5	0.0212	0.3777	0.816	-0.288	-0.144	26.6	35.5	25.2	24.8	28.4	12.6
E019	chr12	121326352	121326485	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.0854	0.09155	NA	NA	NA	2.0	3.1	3.0	2.0	0.0	0.0
E020	chr12	121326485	121326642	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.0403	0.5315	NA	NA	NA	4.9	5.2	4.0	1.0	5.9	2.9
E021	chr12	121327095	121327231	TRUE	OK	1454.1	0.00371	0.3778	0.8161	-0.093	-0.046	1600.3	1580.8	1482.6	1376.0	1238.8	1446.4
E022	chr12	121327231	121328256	TRUE	OK	145.5	0.0127	0.01733	0.4709	0.529	0.265	126.2	126.2	123.9	119.1	203.7	174.0
E023	chr12	121328256	121328315	TRUE	OK	34.3	0.0159	0.001989	0.1898	0.933	0.466	25.6	24.0	25.2	28.8	55.8	46.4
E024	chr12	121328315	121328458	TRUE	OK	1573.9	0.00274	0.3709	0.8138	-0.083	-0.041	1747.2	1643.3	1641.8	1510.0	1401.3	1499.6
E025	chr12	121328458	121328497	TRUE	OK	892.8	0.00606	0.8816	0.9714	-0.024	-0.012	1013.6	825.8	970.0	876.6	827.5	843.1
E026	chr12	121328772	121328835	TRUE	OK	25.0	0.0361	0.2071	0.7603	0.498	0.249	30.6	13.6	21.2	18.9	30.4	35.8
E027	chr12	121328998	121329185	TRUE	OK	24.6	0.0158	0.3853	0.8188	0.287	0.144	23.7	19.8	26.2	16.9	27.4	33.8
E028	chr12	121330582	121330672	TRUE	OK	1262.0	0.00545	0.4627	0.8436	-0.093	-0.046	1389.3	1259.6	1401.0	1275.7	1114.4	1132.2
E029	chr12	121330672	121331226	TRUE	OK	79.8	0.00397	0.1405	0.7302	0.250	0.125	79.9	77.2	71.5	87.4	91.1	71.5
E030	chr12	121331226	121331346	TRUE	OK	33.5	0.00678	0.775	0.9428	-0.070	-0.035	40.4	36.5	30.2	29.8	27.4	36.7
E031	chr12	121331346	121331391	TRUE	OK	1115.0	0.00521	0.3859	0.8189	-0.109	-0.054	1205.9	1116.8	1273.1	1113.9	986.1	993.9
E032	chr12	121331391	121331428	TRUE	OK	1016.4	0.00599	0.9474	0.9876	0.010	0.005	1082.6	972.9	1111.0	1064.3	909.8	958.1
E033	chr12	121331428	121335172	TRUE	OK	160.0	0.00861	0.01356	0.4331	0.456	0.228	151.8	137.6	136.0	178.7	145.9	209.8
E034	chr12	121335516	121335532	TRUE	OK	12.6	0.0199	0.5666	0.8771	0.224	0.112	9.9	18.8	8.1	11.9	11.8	15.5
E035	chr12	121335532	121335609	TRUE	OK	1102.5	0.00581	0.558	0.8741	0.077	0.039	1203.9	1032.3	1129.1	1164.5	1020.4	1064.5
E036	chr12	121335609	121335682	TRUE	OK	1106.5	0.00631	0.1745	0.7461	0.183	0.092	1213.8	984.3	1070.7	1174.5	1085.0	1110.9
E037	chr12	121335682	121335723	TRUE	OK	1150.1	0.00731	0.231	0.7696	0.172	0.086	1264.1	997.9	1148.2	1157.6	1108.5	1224.0
E038	chr12	121337290	121337331	TRUE	OK	1079.0	0.00827	0.3181	0.7969	0.153	0.077	1195.0	940.5	1081.8	1078.2	1005.7	1172.8
E039	chr12	121337331	121337367	TRUE	OK	1160.3	0.00741	0.4787	0.849	0.102	0.051	1275.9	1025.0	1215.7	1158.6	1081.1	1205.6
E040	chr12	121337367	121337392	TRUE	OK	1172.1	0.00578	0.5211	0.8627	0.085	0.042	1259.1	1087.6	1223.8	1170.5	1063.5	1227.9
E041	chr12	121337392	121337393	TRUE	OK	34.7	0.0494	0.3448	0.8054	-0.379	-0.190	44.4	27.1	50.4	41.7	28.4	16.4
E042	chr12	121337393	121337395	TRUE	OK	29.6	0.0402	0.3761	0.8154	-0.346	-0.173	37.5	22.9	42.3	35.7	22.5	16.4
E043	chr12	121342002	121342069	TRUE	OK	1454.8	0.00588	0.4533	0.8404	0.100	0.050	1527.3	1339.9	1549.1	1390.9	1359.2	1562.4
E044	chr12	121342069	121342071	TRUE	OK	20.0	0.0304	0.004177	0.2727	-1.148	-0.574	26.6	24.0	34.2	17.9	11.8	5.8
E045	chr12	121345838	121345839	TRUE	OK	1052.9	0.00407	0.7285	0.929	0.040	0.020	1084.6	1015.6	1150.2	980.9	979.3	1107.0
E046	chr12	121345839	121345923	TRUE	OK	1434.2	0.00386	0.8444	0.9617	0.022	0.011	1541.1	1386.8	1524.9	1336.3	1338.7	1477.3
E047	chr12	121345923	121345951	TRUE	OK	1047.6	0.00344	0.8662	0.9674	0.019	0.009	1129.0	1021.9	1103.9	961.0	982.2	1087.7
E048	chr12	121345951	121345998	TRUE	OK	1022.1	0.00449	0.8981	0.9756	-0.014	-0.007	1124.0	988.5	1094.9	944.1	927.4	1053.9
E049	chr12	121345998	121346031	TRUE	OK	1011.9	0.00368	0.8042	0.951	0.026	0.013	1124.0	979.1	1033.4	960.0	947.0	1027.7
E050	chr12	121346031	121346035	TRUE	OK	94.0	0.0168	0.4107	0.8273	-0.206	-0.103	128.2	82.4	102.7	64.5	96.9	88.9
E051	chr12	121346035	121346126	TRUE	OK	112.2	0.00895	0.9173	0.9806	-0.015	-0.008	134.1	104.3	113.8	85.4	113.6	121.8
E052	chr12	121346126	121346794	TRUE	OK	232.5	0.00823	0.1635	0.7408	0.246	0.123	236.6	201.2	230.7	195.6	255.6	275.5
E053	chr12	121346794	121346895	TRUE	OK	60.9	0.00609	0.3449	0.8055	-0.187	-0.093	74.9	57.3	69.5	45.7	56.8	60.9
E054	chr12	121346895	121347005	TRUE	OK	1039.9	0.00791	0.9584	0.9904	0.004	0.002	1211.8	957.2	1075.7	1037.5	925.4	1031.6
E055	chr12	121347005	121347801	TRUE	OK	25.7	0.0438	0.9492	0.9881	-0.014	-0.007	28.6	17.7	34.2	30.8	29.4	13.5
E056	chr12	121347801	121347875	TRUE	OK	932.8	0.00951	0.5185	0.8619	0.102	0.051	1029.4	795.6	999.2	982.9	869.6	920.4
E057	chr12	121347875	121347881	TRUE	OK	694.2	0.0138	0.4697	0.846	0.133	0.066	790.8	546.4	742.3	728.7	643.4	713.5
E058	chr12	121347881	121347883	TRUE	OK	14.3	0.099	0.6661	0.9092	-0.122	-0.061	15.8	14.6	16.1	21.8	14.7	2.9
E059	chr12	121351059	121351203	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.392	0.9718	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	0.0
E060	chr12	121352133	121352304	TRUE	OK	1122.2	0.0147	0.3409	0.8043	0.180	0.090	1253.2	860.2	1205.6	1157.6	1110.5	1145.7
E061	chr12	121352304	121352327	TRUE	OK	651.2	0.0143	0.1552	0.7368	0.273	0.137	719.8	475.5	665.8	676.1	677.7	692.3
E062	chr12	121352327	121352385	TRUE	OK	581.3	0.0137	0.1239	0.7193	0.294	0.147	637.0	422.3	589.2	596.7	615.0	627.5
E063	chr12	121352385	121352388	TRUE	OK	377.0	0.0132	0.1916	0.7544	0.250	0.125	415.1	279.4	388.8	371.3	381.9	425.4
E064	chr12	121352388	121352395	TRUE	OK	358.8	0.0125	0.1855	0.7511	0.250	0.125	395.4	269.0	366.6	349.5	365.3	407.0
E065	chr12	121352395	121352411	TRUE	OK	224.9	0.00989	0.4939	0.8537	0.117	0.059	257.3	180.4	237.7	220.4	214.5	238.8
E066	chr12	121352411	121352417	TRUE	OK	117.9	0.00412	0.3178	0.7967	0.153	0.077	121.3	107.4	120.9	130.1	106.7	120.9
E067	chr12	121399610	121399896	FALSE	LOW_COUNTS_INDEP_FILTER	7.0	0.0236	0.8863	NA	NA	NA	4.9	10.4	6.0	5.0	8.8	6.8
J068	chr12	121308691	121309700	TRUE	OK	971.0	0.0133	0.6034	0.8889	-0.129	-0.065	901.2	1361.8	889.4	892.5	927.4	853.7
J069	chr12	121309863	121309969	FALSE	LOW_COUNTS_INDEP_FILTER	7.9	0.0119	0.02148	NA	NA	NA	5.9	5.2	5.0	9.9	11.8	9.7
J070	chr12	121309863	121318276	TRUE	OK	1125.8	0.00645	0.8866	0.9728	-0.023	-0.012	1116.2	1354.5	1071.7	980.9	1172.2	1059.7
J071	chr12	121310011	121318276	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0193	0.6501	NA	NA	NA	3.9	7.3	4.0	6.0	3.9	6.8
J072	chr12	121318154	121318276	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0342	0.8819	NA	NA	NA	3.0	3.1	2.0	2.0	2.0	2.9
J073	chr12	121318351	121318500	TRUE	OK	18.3	0.0201	0.7245	0.9276	-0.135	-0.067	18.7	13.6	27.2	18.9	18.6	12.6
J074	chr12	121318404	121318500	TRUE	OK	45.7	0.00325	0.02259	0.5102	0.454	0.227	43.4	42.8	35.3	50.6	48.0	54.1
J075	chr12	121318424	121318500	TRUE	OK	1139.3	0.0034	0.3113	0.7948	-0.104	-0.052	1175.3	1346.2	1148.2	974.9	1180.0	1011.3
J076	chr12	121318608	121319696	TRUE	OK	975.5	0.00164	0.2825	0.7857	0.084	0.042	1054.0	985.4	931.7	928.3	973.4	980.4
J077	chr12	121319818	121320384	TRUE	OK	855.4	0.00474	0.6644	0.9088	0.056	0.028	931.8	875.9	819.9	814.1	759.9	931.1
J078	chr12	121320459	121327095	TRUE	OK	838.9	0.00454	0.3147	0.796	-0.118	-0.059	900.2	976.0	840.0	761.5	693.3	862.4
J079	chr12	121326642	121327095	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.259	0.254	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	0.0
J080	chr12	121327231	121328315	TRUE	OK	896.1	0.00387	0.35	0.8075	-0.102	-0.051	1005.7	961.4	919.6	864.7	748.2	876.9
J081	chr12	121328458	121328772	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0891	0.9045	NA	NA	NA	4.9	1.0	1.0	2.0	2.9	1.0
J082	chr12	121328458	121330582	TRUE	OK	176.0	0.0023	0.3382	0.8035	-0.113	-0.057	199.2	185.6	185.3	157.9	182.1	146.0
J083	chr12	121328497	121330582	TRUE	OK	721.8	0.00558	0.6138	0.8925	-0.068	-0.034	813.5	690.3	798.7	726.7	648.3	653.6
J084	chr12	121328497	121335532	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.357	0.8713	NA	NA	NA	0.0	0.0	3.0	0.0	1.0	1.0
J085	chr12	121329185	121337290	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5416	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J086	chr12	121330672	121331226	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0607	0.8793	NA	NA	NA	2.0	4.2	3.0	0.0	4.9	2.9
J087	chr12	121330672	121331346	TRUE	OK	807.0	0.00496	0.1902	0.754	-0.163	-0.081	876.6	832.1	937.7	803.2	687.5	704.8
J088	chr12	121330672	121335532	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.149	0.3803	NA	NA	NA	1.0	2.1	0.0	1.0	0.0	0.0
J089	chr12	121331428	121335532	TRUE	OK	843.5	0.00606	0.8366	0.9597	0.029	0.014	919.0	796.6	896.4	890.5	752.1	806.3
J090	chr12	121335723	121337290	TRUE	OK	974.8	0.00724	0.2372	0.7712	0.172	0.086	1060.0	848.8	979.0	974.9	919.5	1066.4
J091	chr12	121337392	121342002	TRUE	OK	1077.5	0.00529	0.515	0.8608	0.083	0.041	1156.6	995.8	1131.1	1052.4	989.1	1139.9
J092	chr12	121342069	121345838	TRUE	OK	1043.8	0.00388	0.716	0.9248	0.041	0.021	1071.8	1006.2	1143.2	970.9	970.5	1100.3
J093	chr12	121345951	121346035	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J094	chr12	121346031	121346895	TRUE	OK	759.2	0.00403	0.8161	0.9542	0.025	0.013	858.8	732.0	762.5	740.6	697.2	763.8
J095	chr12	121346126	121346895	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.5824	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J096	chr12	121347005	121347801	TRUE	OK	554.2	0.00756	0.961	0.991	0.007	0.004	625.1	510.9	591.2	590.7	493.6	513.4
J097	chr12	121347005	121352133	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.137	0.7978	NA	NA	NA	2.0	3.1	2.0	0.0	4.9	1.0
J098	chr12	121347881	121351059	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J099	chr12	121347881	121352133	TRUE	OK	665.6	0.0146	0.4393	0.836	0.145	0.073	761.2	516.1	708.1	695.0	622.8	690.3
J100	chr12	121347881	121399610	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.538	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J101	chr12	121351203	121352133	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000089053.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE