Raw Counts Table (ENSG00000234741.8)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr1 | 173858558 | 173859305 | TRUE | OK | 308.5 | 0.0062 | 0.6391 | 0.9008 | 0.074 | 0.037 | 320.0 | 351.0 | 297.0 | 326.0 | 280.0 | 282.0 |
E002 | chr1 | 173863899 | 173863900 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.061 | 0.3879 | NA | NA | NA | 8.0 | 4.0 | 2.0 | 8.0 | 6.0 | 4.0 |
E003 | chr1 | 173863900 | 173863901 | TRUE | OK | 38.1 | 0.018 | 0.4911 | 0.853 | 0.180 | 0.090 | 27.0 | 56.0 | 32.0 | 30.0 | 47.0 | 37.0 |
E004 | chr1 | 173863901 | 173863903 | TRUE | OK | 47.6 | 0.0125 | 0.4394 | 0.836 | 0.174 | 0.087 | 35.0 | 68.0 | 41.0 | 45.0 | 54.0 | 43.0 |
E005 | chr1 | 173863903 | 173863910 | TRUE | OK | 157.8 | 0.0049 | 0.1069 | 0.7045 | 0.231 | 0.115 | 129.0 | 198.0 | 142.0 | 164.0 | 159.0 | 157.0 |
E006 | chr1 | 173863910 | 173863930 | TRUE | OK | 315.6 | 0.00687 | 0.4597 | 0.8428 | 0.100 | 0.050 | 299.0 | 407.0 | 274.0 | 321.0 | 290.0 | 306.0 |
E007 | chr1 | 173863930 | 173863953 | TRUE | OK | 622.2 | 0.00776 | 0.7113 | 0.9234 | -0.075 | -0.037 | 600.0 | 852.0 | 585.0 | 601.0 | 527.0 | 570.0 |
E008 | chr1 | 173863953 | 173863979 | TRUE | OK | 927.6 | 0.00673 | 0.5581 | 0.8741 | -0.103 | -0.051 | 887.0 | 1276.0 | 896.0 | 868.0 | 803.0 | 838.0 |
E009 | chr1 | 173863979 | 173864015 | TRUE | OK | 1725.6 | 0.00586 | 0.6518 | 0.905 | 0.041 | 0.020 | 1633.0 | 2254.0 | 1579.0 | 1594.0 | 1673.0 | 1636.0 |
E010 | chr1 | 173864015 | 173864033 | TRUE | OK | 1932.0 | 0.00662 | 0.6205 | 0.8947 | 0.048 | 0.024 | 1815.0 | 2541.0 | 1753.0 | 1786.0 | 1873.0 | 1841.0 |
E011 | chr1 | 173864033 | 173864075 | TRUE | OK | 2370.6 | 0.0056 | 0.7507 | 0.9355 | 0.024 | 0.012 | 2262.0 | 3074.0 | 2213.0 | 2198.0 | 2243.0 | 2255.0 |
E012 | chr1 | 173864075 | 173864256 | TRUE | OK | 472.3 | 0.00704 | 3.322e-07 | 0.0003345 | -0.787 | -0.393 | 557.0 | 765.0 | 538.0 | 323.0 | 348.0 | 293.0 |
E013 | chr1 | 173864256 | 173864304 | TRUE | OK | 3418.5 | 0.0038 | 0.009234 | 0.3818 | 0.263 | 0.131 | 3097.0 | 4110.0 | 3109.0 | 3228.0 | 3489.0 | 3536.0 |
E014 | chr1 | 173864304 | 173864483 | TRUE | OK | 1029.8 | 0.00247 | 3.117e-16 | 2.209e-12 | -0.760 | -0.380 | 1146.0 | 1578.0 | 1275.0 | 663.0 | 769.0 | 732.0 |
E015 | chr1 | 173864483 | 173864506 | TRUE | OK | 3268.4 | 0.00205 | 0.0001075 | 0.03271 | 0.300 | 0.150 | 2947.0 | 3798.0 | 3021.0 | 3124.0 | 3305.0 | 3479.0 |
E016 | chr1 | 173864506 | 173864630 | TRUE | OK | 1043.4 | 0.00116 | 5.705e-28 | 1.559e-23 | -0.759 | -0.379 | 1218.0 | 1500.0 | 1337.0 | 694.0 | 700.0 | 801.0 |
E017 | chr1 | 173864630 | 173864674 | TRUE | OK | 735.5 | 0.000934 | 3.567e-22 | 6.5e-18 | -0.665 | -0.333 | 835.0 | 1040.0 | 937.0 | 494.0 | 528.0 | 573.0 |
E018 | chr1 | 173864674 | 173864704 | TRUE | OK | 3682.0 | 0.00142 | 4.686e-10 | 1.128e-06 | 0.414 | 0.207 | 3263.0 | 4123.0 | 3372.0 | 3556.0 | 3816.0 | 4046.0 |
E019 | chr1 | 173864704 | 173864871 | TRUE | OK | 911.7 | 0.00147 | 2.242e-10 | 5.877e-07 | -0.477 | -0.239 | 1047.0 | 1171.0 | 1110.0 | 667.0 | 696.0 | 781.0 |
E020 | chr1 | 173864871 | 173864901 | TRUE | OK | 519.9 | 0.00286 | 6.46e-07 | 0.0005872 | -0.509 | -0.254 | 613.0 | 666.0 | 643.0 | 346.0 | 394.0 | 459.0 |
E021 | chr1 | 173864901 | 173864905 | TRUE | OK | 335.1 | 0.00343 | 2.241e-10 | 5.877e-07 | -0.745 | -0.372 | 416.0 | 446.0 | 452.0 | 197.0 | 230.0 | 268.0 |
E022 | chr1 | 173864905 | 173864906 | TRUE | OK | 347.5 | 0.00388 | 1.766e-09 | 3.576e-06 | -0.733 | -0.366 | 439.0 | 453.0 | 467.0 | 207.0 | 241.0 | 277.0 |
E023 | chr1 | 173864906 | 173864954 | TRUE | OK | 404.6 | 0.00377 | 5.071e-09 | 8.985e-06 | -0.689 | -0.344 | 504.0 | 523.0 | 538.0 | 252.0 | 280.0 | 330.0 |
E024 | chr1 | 173864954 | 173865167 | TRUE | OK | 565.2 | 0.00557 | 1.646e-05 | 0.008168 | -0.569 | -0.284 | 719.0 | 691.0 | 711.0 | 373.0 | 413.0 | 487.0 |
E025 | chr1 | 173865167 | 173865228 | TRUE | OK | 410.9 | 0.0063 | 0.0006712 | 0.1053 | -0.483 | -0.242 | 522.0 | 478.0 | 513.0 | 282.0 | 316.0 | 358.0 |
E026 | chr1 | 173865228 | 173865243 | TRUE | OK | 3482.9 | 0.00116 | 7.783e-17 | 6.475e-13 | 0.513 | 0.256 | 3057.0 | 3743.0 | 3111.0 | 3435.0 | 3703.0 | 3941.0 |
E027 | chr1 | 173865243 | 173865248 | TRUE | OK | 3367.9 | 0.00113 | 1.762e-16 | 1.322e-12 | 0.502 | 0.251 | 2952.0 | 3618.0 | 3020.0 | 3296.0 | 3582.0 | 3829.0 |
E028 | chr1 | 173865248 | 173865282 | TRUE | OK | 3793.6 | 0.00205 | 4.342e-11 | 1.308e-07 | 0.520 | 0.260 | 3335.0 | 4122.0 | 3372.0 | 3710.0 | 3961.0 | 4361.0 |
E029 | chr1 | 173865282 | 173865352 | TRUE | OK | 451.1 | 0.00868 | 0.002838 | 0.228 | -0.485 | -0.242 | 552.0 | 511.0 | 598.0 | 321.0 | 394.0 | 334.0 |
E030 | chr1 | 173865352 | 173865470 | TRUE | OK | 493.4 | 0.00539 | 1.215e-05 | 0.006476 | -0.582 | -0.291 | 596.0 | 588.0 | 675.0 | 339.0 | 367.0 | 397.0 |
E031 | chr1 | 173865470 | 173865509 | TRUE | OK | 2311.4 | 0.00159 | 1.453e-05 | 0.007411 | 0.311 | 0.155 | 2093.0 | 2599.0 | 2138.0 | 2186.0 | 2322.0 | 2583.0 |
E032 | chr1 | 173865509 | 173865547 | TRUE | OK | 3913.6 | 0.00232 | 8.162e-10 | 1.816e-06 | 0.511 | 0.255 | 3440.0 | 4273.0 | 3503.0 | 3839.0 | 4027.0 | 4500.0 |
E033 | chr1 | 173865547 | 173865817 | TRUE | OK | 290.3 | 0.0105 | 1.624e-05 | 0.008094 | -0.796 | -0.398 | 371.0 | 358.0 | 424.0 | 219.0 | 178.0 | 190.0 |
E034 | chr1 | 173865817 | 173865856 | TRUE | OK | 129.1 | 0.018 | 0.0004456 | 0.08285 | -0.865 | -0.432 | 184.0 | 142.0 | 197.0 | 73.0 | 74.0 | 105.0 |
E035 | chr1 | 173865856 | 173865866 | TRUE | OK | 3534.0 | 0.0022 | 4.681e-08 | 6.33e-05 | 0.443 | 0.221 | 3106.0 | 3919.0 | 3208.0 | 3453.0 | 3585.0 | 4018.0 |
E036 | chr1 | 173865866 | 173865894 | TRUE | OK | 4301.0 | 0.00173 | 2.699e-15 | 1.666e-11 | 0.576 | 0.288 | 3738.0 | 4616.0 | 3876.0 | 4253.0 | 4483.0 | 4955.0 |
E037 | chr1 | 173865894 | 173865952 | TRUE | OK | 252.9 | 0.00606 | 2.19e-06 | 0.001599 | -0.707 | -0.354 | 329.0 | 315.0 | 341.0 | 162.0 | 200.0 | 170.0 |
E038 | chr1 | 173865952 | 173866176 | TRUE | OK | 399.3 | 0.00681 | 0.0003173 | 0.06683 | -0.529 | -0.264 | 498.0 | 477.0 | 512.0 | 257.0 | 346.0 | 308.0 |
E039 | chr1 | 173866176 | 173866206 | TRUE | OK | 4331.5 | 0.00236 | 2.008e-13 | 9.606e-10 | 0.619 | 0.309 | 3786.0 | 4576.0 | 3847.0 | 4334.0 | 4506.0 | 5062.0 |
E040 | chr1 | 173866206 | 173866215 | TRUE | OK | 118.8 | 0.0033 | 0.04977 | 0.6248 | -0.279 | -0.140 | 141.0 | 145.0 | 129.0 | 91.0 | 110.0 | 98.0 |
E041 | chr1 | 173866215 | 173866527 | TRUE | OK | 285.0 | 0.00742 | 0.02598 | 0.531 | -0.351 | -0.176 | 339.0 | 309.0 | 367.0 | 234.0 | 229.0 | 235.0 |
E042 | chr1 | 173866527 | 173866567 | TRUE | OK | 4165.1 | 0.00136 | 3.497e-22 | 6.5e-18 | 0.639 | 0.319 | 3620.0 | 4226.0 | 3808.0 | 4204.0 | 4405.0 | 4853.0 |
E043 | chr1 | 173866567 | 173866760 | TRUE | OK | 602.7 | 0.0111 | 0.07609 | 0.6723 | -0.308 | -0.154 | 693.0 | 641.0 | 782.0 | 407.0 | 567.0 | 535.0 |
E044 | chr1 | 173866760 | 173866796 | TRUE | OK | 3670.7 | 0.00161 | 2.464e-17 | 2.3e-13 | 0.607 | 0.303 | 3199.0 | 3670.0 | 3377.0 | 3692.0 | 3886.0 | 4314.0 |
E045 | chr1 | 173866796 | 173866990 | TRUE | OK | 165.5 | 0.0111 | 0.3558 | 0.8094 | -0.164 | -0.082 | 186.0 | 184.0 | 189.0 | 133.0 | 181.0 | 122.0 |
E046 | chr1 | 173866990 | 173867030 | TRUE | OK | 3139.2 | 0.00229 | 7.956e-12 | 3.044e-08 | 0.578 | 0.289 | 2766.0 | 3102.0 | 2871.0 | 3209.0 | 3275.0 | 3712.0 |
E047 | chr1 | 173867030 | 173867040 | TRUE | OK | 2150.8 | 0.00131 | 5.257e-18 | 5.294e-14 | 0.581 | 0.290 | 1826.0 | 2081.0 | 1964.0 | 2226.0 | 2321.0 | 2558.0 |
E048 | chr1 | 173867040 | 173867043 | TRUE | OK | 1753.1 | 0.00138 | 2.486e-15 | 1.56e-11 | 0.551 | 0.275 | 1470.0 | 1714.0 | 1609.0 | 1798.0 | 1874.0 | 2111.0 |
E049 | chr1 | 173867043 | 173867045 | TRUE | OK | 95.3 | 0.00647 | 0.2273 | 0.7679 | -0.206 | -0.103 | 101.0 | 110.0 | 115.0 | 63.0 | 100.0 | 84.0 |
E050 | chr1 | 173867045 | 173867154 | TRUE | OK | 75.2 | 0.0145 | 0.0196 | 0.4883 | -0.563 | -0.281 | 102.0 | 76.0 | 106.0 | 47.0 | 59.0 | 62.0 |
E051 | chr1 | 173867154 | 173867689 | TRUE | OK | 340.0 | 0.0161 | 0.2311 | 0.7696 | -0.260 | -0.130 | 438.0 | 320.0 | 425.0 | 256.0 | 288.0 | 321.0 |
E052 | chr1 | 173867689 | 173867721 | TRUE | OK | 133.6 | 0.0157 | 0.1835 | 0.7504 | -0.298 | -0.149 | 168.0 | 131.0 | 171.0 | 110.0 | 93.0 | 131.0 |
E053 | chr1 | 173867721 | 173867729 | TRUE | OK | 94.6 | 0.026 | 0.1128 | 0.7106 | -0.471 | -0.235 | 118.0 | 86.0 | 145.0 | 71.0 | 60.0 | 89.0 |
E054 | chr1 | 173867729 | 173867815 | TRUE | OK | 131.9 | 0.0404 | 0.06223 | 0.6507 | -0.697 | -0.348 | 168.0 | 110.0 | 237.0 | 88.0 | 80.0 | 110.0 |
E055 | chr1 | 173867959 | 173867980 | TRUE | OK | 1648.5 | 0.00133 | 2.172e-16 | 1.598e-12 | 0.566 | 0.283 | 1380.0 | 1605.0 | 1491.0 | 1700.0 | 1771.0 | 1999.0 |
E056 | chr1 | 173867980 | 173867983 | TRUE | OK | 47.5 | 0.0153 | 0.122 | 0.7177 | 0.418 | 0.209 | 31.0 | 50.0 | 51.0 | 41.0 | 67.0 | 46.0 |
E057 | chr1 | 173867983 | 173867987 | TRUE | OK | 35.3 | 0.0158 | 0.0514 | 0.6287 | 0.563 | 0.281 | 20.0 | 39.0 | 34.0 | 29.0 | 51.0 | 40.0 |
E058 | chr1 | 173867987 | 173867988 | TRUE | OK | 12.7 | 0.0163 | 0.0348 | 0.5732 | 0.845 | 0.422 | 8.0 | 12.0 | 10.0 | 11.0 | 22.0 | 14.0 |
E059 | chr1 | 173867988 | 173867989 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0215 | 0.1372 | NA | NA | NA | 6.0 | 7.0 | 7.0 | 5.0 | 13.0 | 11.0 |
E060 | chr1 | 173867989 | 173867991 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.0302 | 0.05951 | NA | NA | NA | 5.0 | 5.0 | 5.0 | 4.0 | 13.0 | 10.0 |
E061 | chr1 | 173867991 | 173868009 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.0413 | 0.08857 | NA | NA | NA | 5.0 | 4.0 | 5.0 | 3.0 | 12.0 | 10.0 |
E062 | chr1 | 173868753 | 173868882 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.7 | 0.154 | 0.3105 | NA | NA | NA | 8.0 | 4.0 | 3.0 | 5.0 | 2.0 | 0.0 |
J063 | chr1 | 173859305 | 173864256 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0665 | 0.8296 | NA | NA | NA | 7.0 | 5.0 | 1.0 | 4.0 | 4.0 | 2.0 |
J064 | chr1 | 173864075 | 173864256 | TRUE | OK | 2032.3 | 0.00448 | 0.2222 | 0.7657 | 0.125 | 0.063 | 1882.0 | 2560.0 | 1856.0 | 1924.0 | 1991.0 | 2006.0 |
J065 | chr1 | 173864304 | 173864483 | TRUE | OK | 2473.3 | 0.00141 | 1.902e-15 | 1.213e-11 | 0.537 | 0.268 | 2096.0 | 2658.0 | 2118.0 | 2541.0 | 2694.0 | 2800.0 |
J066 | chr1 | 173864304 | 173864674 | TRUE | OK | 111.7 | 0.0107 | 0.3114 | 0.7948 | -0.241 | -0.121 | 103.0 | 178.0 | 103.0 | 90.0 | 98.0 | 97.0 |
J067 | chr1 | 173864304 | 173865470 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.132 | 0.4108 | NA | NA | NA | 4.0 | 4.0 | 3.0 | 11.0 | 1.0 | 5.0 |
J068 | chr1 | 173864506 | 173864674 | TRUE | OK | 2339.6 | 0.00132 | 8.102e-21 | 1.292e-16 | 0.618 | 0.309 | 1953.0 | 2435.0 | 1944.0 | 2442.0 | 2622.0 | 2713.0 |
J069 | chr1 | 173864704 | 173865228 | TRUE | OK | 2688.4 | 0.00126 | 2.079e-19 | 2.651e-15 | 0.580 | 0.290 | 2253.0 | 2856.0 | 2299.0 | 2726.0 | 2937.0 | 3137.0 |
J070 | chr1 | 173864704 | 173865509 | TRUE | OK | 12.7 | 0.0126 | 0.2736 | 0.783 | -0.421 | -0.210 | 11.0 | 14.0 | 21.0 | 9.0 | 12.0 | 9.0 |
J071 | chr1 | 173865282 | 173865470 | TRUE | OK | 1750.3 | 0.00251 | 3.27e-08 | 4.617e-05 | 0.487 | 0.243 | 1461.0 | 1923.0 | 1491.0 | 1717.0 | 1864.0 | 2094.0 |
J072 | chr1 | 173865282 | 173865509 | TRUE | OK | 1401.5 | 0.00176 | 1.161e-13 | 5.695e-10 | 0.573 | 0.287 | 1147.0 | 1472.0 | 1156.0 | 1451.0 | 1524.0 | 1702.0 |
J073 | chr1 | 173865282 | 173866527 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.414 | 0.5282 | NA | NA | NA | 0.0 | 1.0 | 4.0 | 0.0 | 0.0 | 2.0 |
J074 | chr1 | 173865547 | 173865856 | TRUE | OK | 3211.5 | 0.00277 | 3.98e-08 | 5.499e-05 | 0.495 | 0.247 | 2743.0 | 3578.0 | 2813.0 | 3136.0 | 3340.0 | 3740.0 |
J075 | chr1 | 173865894 | 173866176 | TRUE | OK | 3520.2 | 0.00177 | 5.22e-16 | 3.567e-12 | 0.599 | 0.299 | 2995.0 | 3735.0 | 3078.0 | 3518.0 | 3730.0 | 4166.0 |
J076 | chr1 | 173865952 | 173866176 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0312 | 0.3249 | NA | NA | NA | 5.0 | 16.0 | 9.0 | 8.0 | 5.0 | 5.0 |
J077 | chr1 | 173866206 | 173866527 | TRUE | OK | 3744.6 | 0.00194 | 4.67e-17 | 4.061e-13 | 0.650 | 0.325 | 3237.0 | 3804.0 | 3314.0 | 3849.0 | 3925.0 | 4454.0 |
J078 | chr1 | 173866567 | 173866760 | TRUE | OK | 3346.1 | 0.00115 | 9.312e-29 | 2.969e-24 | 0.689 | 0.344 | 2809.0 | 3316.0 | 2958.0 | 3477.0 | 3600.0 | 4026.0 |
J079 | chr1 | 173866796 | 173866990 | TRUE | OK | 3092.4 | 0.0019 | 1.518e-14 | 8.417e-11 | 0.596 | 0.298 | 2703.0 | 3047.0 | 2809.0 | 3177.0 | 3243.0 | 3675.0 |
J080 | chr1 | 173867043 | 173867154 | TRUE | OK | 30.1 | 0.00761 | 0.1158 | 0.7128 | 0.421 | 0.210 | 31.0 | 24.0 | 29.0 | 24.0 | 38.0 | 36.0 |
J081 | chr1 | 173867043 | 173867721 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.159 | 0.06339 | NA | NA | NA | 8.0 | 3.0 | 12.0 | 4.0 | 2.0 | 0.0 |
J082 | chr1 | 173867043 | 173867959 | TRUE | OK | 1614.0 | 0.000972 | 6.954e-22 | 1.157e-17 | 0.590 | 0.295 | 1337.0 | 1573.0 | 1437.0 | 1675.0 | 1743.0 | 1974.0 |
J083 | chr1 | 173867043 | 173867980 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0382 | 0.488 | NA | NA | NA | 2.0 | 5.0 | 1.0 | 2.0 | 5.0 | 3.0 |
J084 | chr1 | 173868009 | 173868753 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.121 | 0.7844 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 |
N085 | chr1 | 173864079 | 173864256 | TRUE | OK | 42.0 | 0.00628 | 0.5559 | 0.8735 | 0.127 | 0.064 | 33.0 | 56.0 | 40.0 | 45.0 | 34.0 | 44.0 |
N086 | chr1 | 173864502 | 173864674 | TRUE | OK | 20.6 | 0.00862 | 0.6245 | 0.8961 | 0.151 | 0.075 | 17.0 | 19.0 | 27.0 | 23.0 | 17.0 | 21.0 |
N087 | chr1 | 173866206 | 173866990 | TRUE | OK | 12.0 | 0.00912 | 0.2277 | 0.7682 | -0.456 | -0.228 | 11.0 | 16.0 | 17.0 | 7.0 | 10.0 | 11.0 |
N088 | chr1 | 173866581 | 173866760 | TRUE | OK | 47.1 | 0.0164 | 0.6775 | 0.9128 | -0.123 | -0.062 | 54.0 | 67.0 | 36.0 | 37.0 | 52.0 | 37.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|