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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr7 | 73154937 | 73155343 | TRUE | OK | 34.7 | 0.304 | 0.3482 | 0.8068 | -0.510 | -0.255 | 43.4 | 19.8 | 33.2 | 64.5 | 44.1 | 2.9 |
E002 | chr7 | 73175414 | 73175525 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0585 | 0.94 | NA | NA | NA | 4.9 | 3.1 | 3.0 | 6.9 | 8.8 | 1.9 |
E003 | chr7 | 73176856 | 73176922 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0358 | 0.8012 | NA | NA | NA | 3.0 | 4.2 | 3.0 | 6.9 | 3.9 | 3.9 |
E004 | chr7 | 73179086 | 73179270 | TRUE | OK | 10.9 | 0.0135 | 0.5898 | 0.8846 | -0.222 | -0.111 | 8.9 | 10.4 | 8.1 | 12.9 | 12.7 | 12.6 |
E005 | chr7 | 73180538 | 73180597 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.0207 | 0.6674 | NA | NA | NA | 3.9 | 6.3 | 8.1 | 9.9 | 14.7 | 9.7 |
E006 | chr7 | 73182076 | 73182148 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0261 | 0.4362 | NA | NA | NA | 3.0 | 6.3 | 7.1 | 6.0 | 6.9 | 6.8 |
E007 | chr7 | 73183114 | 73183298 | TRUE | OK | 14.5 | 0.0248 | 0.03695 | 0.5827 | 0.932 | 0.466 | 5.9 | 8.3 | 7.1 | 26.8 | 13.7 | 25.1 |
E008 | chr7 | 73184660 | 73184719 | TRUE | OK | 29.7 | 0.0148 | 2.821e-05 | 0.01216 | 1.389 | 0.695 | 15.8 | 8.3 | 10.1 | 50.6 | 35.3 | 58.0 |
E009 | chr7 | 73190065 | 73190137 | TRUE | OK | 71.6 | 0.00654 | 2.083e-05 | 0.009863 | 0.880 | 0.440 | 49.3 | 26.1 | 34.2 | 108.2 | 93.0 | 118.9 |
E010 | chr7 | 73191370 | 73191554 | TRUE | OK | 224.8 | 0.00339 | 5.453e-09 | 9.442e-06 | 0.785 | 0.392 | 145.9 | 103.2 | 127.9 | 284.9 | 338.8 | 348.1 |
E011 | chr7 | 73192496 | 73192555 | TRUE | OK | 196.2 | 0.00609 | 1.294e-05 | 0.006773 | 0.713 | 0.357 | 131.1 | 91.8 | 113.8 | 232.3 | 301.6 | 306.5 |
E012 | chr7 | 73192950 | 73193025 | TRUE | OK | 130.5 | 0.00597 | 1.792e-05 | 0.008729 | 0.749 | 0.375 | 89.7 | 56.3 | 70.5 | 157.9 | 194.9 | 213.7 |
E013 | chr7 | 73194625 | 73194727 | TRUE | OK | 57.5 | 0.00942 | 0.004438 | 0.2797 | 0.681 | 0.341 | 40.4 | 28.2 | 28.2 | 67.5 | 76.4 | 104.4 |
E014 | chr7 | 73195635 | 73195701 | TRUE | OK | 14.3 | 0.0108 | 0.002732 | 0.2237 | 1.200 | 0.600 | 5.9 | 5.2 | 7.1 | 22.8 | 20.6 | 24.2 |
E015 | chr7 | 73195878 | 73196062 | TRUE | OK | 48.1 | 0.0177 | 0.274 | 0.7831 | -0.312 | -0.156 | 54.2 | 40.7 | 29.2 | 49.6 | 44.1 | 70.6 |
E016 | chr7 | 73197963 | 73198019 | TRUE | OK | 112.8 | 0.0224 | 0.05896 | 0.6458 | -0.507 | -0.253 | 125.2 | 106.4 | 78.6 | 110.2 | 94.0 | 162.4 |
E017 | chr7 | 73198692 | 73198773 | TRUE | OK | 387.7 | 0.00841 | 0.02874 | 0.5463 | -0.374 | -0.187 | 387.5 | 276.3 | 322.3 | 452.7 | 380.9 | 506.6 |
E018 | chr7 | 73199695 | 73199779 | TRUE | OK | 756.4 | 0.0063 | 3.827e-11 | 1.191e-07 | -0.976 | -0.486 | 712.9 | 645.4 | 670.8 | 818.1 | 786.4 | 905.0 |
E019 | chr7 | 73200448 | 73200632 | TRUE | OK | 924.8 | 0.00352 | 6.736e-10 | 1.562e-06 | -0.759 | -0.378 | 828.2 | 715.3 | 767.5 | 1039.5 | 1038.0 | 1160.2 |
E020 | chr7 | 73202111 | 73202140 | TRUE | OK | 309.4 | 0.0021 | 3.126e-06 | 0.002171 | 0.517 | 0.258 | 227.8 | 170.0 | 191.4 | 386.2 | 424.0 | 457.3 |
E021 | chr7 | 73203422 | 73203464 | TRUE | OK | 295.1 | 0.00607 | 5.708e-11 | 1.68e-07 | 1.011 | 0.505 | 184.4 | 113.7 | 162.2 | 390.2 | 443.6 | 476.7 |
E022 | chr7 | 73204562 | 73204604 | TRUE | OK | 219.2 | 0.00408 | 1.247e-14 | 7.019e-11 | 1.107 | 0.553 | 130.2 | 77.2 | 110.8 | 307.8 | 325.1 | 364.5 |
E023 | chr7 | 73205382 | 73205441 | TRUE | OK | 179.5 | 0.00235 | 7.833e-15 | 4.542e-11 | 1.027 | 0.513 | 107.5 | 74.0 | 84.6 | 252.2 | 274.2 | 284.2 |
E024 | chr7 | 73205441 | 73205458 | TRUE | OK | 105.4 | 0.00336 | 7.904e-09 | 1.309e-05 | 0.944 | 0.472 | 63.1 | 41.7 | 53.4 | 162.8 | 151.8 | 159.5 |
E025 | chr7 | 73206151 | 73207283 | TRUE | OK | 67.7 | 0.00395 | 0.009327 | 0.3832 | 0.485 | 0.243 | 53.2 | 36.5 | 35.3 | 89.4 | 95.0 | 96.7 |
J026 | chr7 | 73155343 | 73175414 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0721 | 0.985 | NA | NA | NA | 3.0 | 3.1 | 1.0 | 6.0 | 4.9 | 1.0 |
J027 | chr7 | 73175525 | 73176856 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0344 | 0.2294 | NA | NA | NA | 3.0 | 3.1 | 3.0 | 3.0 | 3.9 | 1.0 |
J028 | chr7 | 73176922 | 73179086 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.045 | 0.7744 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 5.0 | 1.0 | 3.9 |
J029 | chr7 | 73179270 | 73180538 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0141 | 0.9112 | NA | NA | NA | 3.9 | 6.3 | 6.0 | 7.9 | 10.8 | 8.7 |
J030 | chr7 | 73180597 | 73182076 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0599 | 0.2202 | NA | NA | NA | 1.0 | 6.3 | 7.1 | 4.0 | 4.9 | 3.9 |
J031 | chr7 | 73182148 | 73183114 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0874 | 0.4369 | NA | NA | NA | 0.0 | 1.0 | 2.0 | 3.0 | 4.9 | 1.0 |
J032 | chr7 | 73183298 | 73184660 | TRUE | OK | 11.8 | 0.0589 | 0.07843 | 0.6753 | 1.065 | 0.532 | 5.9 | 6.3 | 4.0 | 22.8 | 7.8 | 24.2 |
J033 | chr7 | 73184719 | 73190065 | TRUE | OK | 27.7 | 0.0179 | 2.518e-05 | 0.01126 | 1.489 | 0.745 | 15.8 | 5.2 | 9.1 | 45.7 | 34.3 | 56.1 |
J034 | chr7 | 73190137 | 73191370 | TRUE | OK | 61.3 | 0.00275 | 1.072e-05 | 0.005849 | 0.835 | 0.418 | 40.4 | 24.0 | 31.2 | 87.4 | 88.1 | 96.7 |
J035 | chr7 | 73191554 | 73192496 | TRUE | OK | 193.3 | 0.00485 | 4.138e-06 | 0.002716 | 0.704 | 0.352 | 128.2 | 91.8 | 112.8 | 230.3 | 295.7 | 300.7 |
J036 | chr7 | 73192555 | 73192950 | TRUE | OK | 124.6 | 0.00608 | 2.495e-05 | 0.01118 | 0.748 | 0.374 | 85.8 | 54.2 | 66.5 | 147.9 | 190.0 | 203.0 |
J037 | chr7 | 73193025 | 73194625 | TRUE | OK | 50.9 | 0.0157 | 0.02705 | 0.5378 | 0.630 | 0.315 | 37.5 | 25.0 | 25.2 | 55.6 | 64.6 | 97.7 |
J038 | chr7 | 73194727 | 73195635 | TRUE | OK | 11.7 | 0.00866 | 0.006366 | 0.3268 | 1.159 | 0.580 | 4.9 | 4.2 | 6.0 | 17.9 | 17.6 | 19.3 |
J039 | chr7 | 73195701 | 73195878 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0352 | 0.008208 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 12.9 | 5.9 | 14.5 |
J040 | chr7 | 73196062 | 73197963 | TRUE | OK | 40.8 | 0.0294 | 0.1308 | 0.7239 | -0.521 | -0.261 | 51.3 | 38.6 | 24.2 | 35.7 | 35.3 | 59.9 |
J041 | chr7 | 73198019 | 73198692 | TRUE | OK | 110.3 | 0.023 | 0.05578 | 0.6394 | -0.523 | -0.261 | 124.2 | 104.3 | 76.5 | 107.2 | 92.1 | 157.6 |
J042 | chr7 | 73198773 | 73199695 | TRUE | OK | 352.5 | 0.00827 | 0.0517 | 0.6295 | -0.335 | -0.167 | 347.1 | 239.8 | 303.2 | 419.9 | 349.6 | 455.4 |
J043 | chr7 | 73199779 | 73200448 | TRUE | OK | 723.4 | 0.00506 | 3.338e-11 | 1.083e-07 | -0.895 | -0.446 | 675.4 | 617.3 | 641.6 | 764.4 | 767.8 | 874.0 |
J044 | chr7 | 73200632 | 73202111 | TRUE | OK | 268.6 | 0.00113 | 0.0002033 | 0.05032 | 0.375 | 0.187 | 204.1 | 155.4 | 176.3 | 340.5 | 352.5 | 382.9 |
J045 | chr7 | 73202140 | 73203422 | TRUE | OK | 240.0 | 0.00727 | 3.477e-07 | 0.0003474 | 0.853 | 0.426 | 157.8 | 93.8 | 141.0 | 305.8 | 364.3 | 377.1 |
J046 | chr7 | 73203464 | 73204562 | TRUE | OK | 215.2 | 0.00248 | 2.377e-18 | 2.526e-14 | 1.118 | 0.559 | 124.2 | 76.1 | 109.8 | 301.8 | 323.2 | 355.8 |
J047 | chr7 | 73204604 | 73205382 | TRUE | OK | 165.6 | 0.00189 | 1.179e-16 | 9.211e-13 | 1.083 | 0.541 | 97.6 | 61.5 | 78.6 | 233.3 | 251.7 | 270.7 |
J048 | chr7 | 73205458 | 73206151 | TRUE | OK | 37.6 | 0.00389 | 2.855e-07 | 0.0002906 | 1.273 | 0.637 | 19.7 | 15.6 | 11.1 | 54.6 | 60.7 | 63.8 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000233369.7 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |