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Normalized Counts Table (ENSG00000226752.9)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr9	120824827	120824970	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0994	0.6495	NA	NA	NA	3.0	4.2	11.1	4.0	5.9	12.6
E002	chr9	120841805	120842440	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0276	0.03029	NA	NA	NA	7.9	4.2	11.1	6.0	4.9	4.8
E003	chr9	120842995	120843099	TRUE	OK	64.2	0.0467	0.3761	0.8154	-0.460	-0.230	96.6	31.3	52.4	77.4	56.8	70.6
E004	chr9	120843099	120843439	TRUE	OK	156.2	0.00382	0.03078	0.5554	-0.326	-0.163	169.6	116.8	127.9	168.8	174.3	179.8
E005	chr9	120844299	120844712	TRUE	OK	97.7	0.00377	0.5746	0.8797	0.084	0.042	92.7	63.6	67.5	114.2	115.6	132.5
E006	chr9	120844712	120844866	TRUE	OK	50.4	0.00416	0.4811	0.8497	-0.141	-0.071	44.4	39.6	42.3	49.6	59.7	66.7
E007	chr9	120844866	120844873	TRUE	OK	36.8	0.0058	0.5097	0.8591	-0.156	-0.078	34.5	29.2	29.2	38.7	38.2	51.2
E008	chr9	120844873	120844899	TRUE	OK	39.2	0.00485	0.6232	0.8956	-0.110	-0.055	34.5	32.3	30.2	39.7	47.0	51.2
E009	chr9	120844899	120844992	TRUE	OK	31.6	0.00704	0.2194	0.7646	-0.320	-0.160	31.6	25.0	28.2	36.7	37.2	30.9
E010	chr9	120844992	120845196	TRUE	OK	95.2	0.00476	0.5842	0.8827	-0.090	-0.045	81.8	80.3	71.5	95.3	132.2	110.2
E011	chr9	120845196	120845201	TRUE	OK	23.8	0.0213	0.3612	0.8111	-0.304	-0.152	25.6	13.6	24.2	14.9	35.3	29.0
E012	chr9	120845201	120845276	TRUE	OK	38.2	0.0263	0.653	0.9054	-0.186	-0.093	50.3	18.8	28.2	29.8	51.9	50.3
E013	chr9	120845276	120845309	TRUE	OK	29.5	0.0485	0.9788	0.9949	-0.117	-0.058	43.4	10.4	19.1	30.8	39.2	33.8
E014	chr9	120845309	120845453	TRUE	OK	39.4	0.0251	0.6707	0.9106	-0.188	-0.094	53.2	19.8	27.2	33.8	48.0	54.1
E015	chr9	120845453	120845465	TRUE	OK	19.6	0.0187	0.4874	0.852	-0.249	-0.125	20.7	9.4	21.2	16.9	19.6	30.0
E016	chr9	120845465	120845473	TRUE	OK	16.8	0.0145	0.6794	0.9134	-0.148	-0.074	19.7	9.4	13.1	13.9	17.6	27.1
E017	chr9	120845473	120845620	TRUE	OK	30.7	0.00771	0.9938	0.9984	0.002	0.001	25.6	20.9	26.2	31.8	32.3	47.4
E018	chr9	120845620	120845648	TRUE	OK	23.8	0.032	0.997	0.9992	-0.010	-0.005	12.8	16.7	27.2	29.8	23.5	32.9
E019	chr9	120845648	120845826	TRUE	OK	42.2	0.00874	0.9852	0.9963	-0.005	-0.003	29.6	31.3	39.3	51.6	47.0	54.1
E020	chr9	120845826	120845887	TRUE	OK	34.3	0.00561	0.9307	0.9837	0.018	0.009	29.6	24.0	27.2	40.7	40.2	44.5
E021	chr9	120846509	120846598	TRUE	OK	33.1	0.00667	0.8928	0.9743	-0.034	-0.017	32.5	18.8	28.2	29.8	43.1	46.4
E022	chr9	120846598	120846681	TRUE	OK	36.0	0.00595	0.2136	0.7628	-0.297	-0.149	39.4	26.1	30.2	29.8	47.0	43.5
E023	chr9	120846681	120846732	TRUE	OK	33.5	0.0187	0.536	0.8674	-0.163	-0.082	32.5	27.1	25.2	24.8	55.8	35.8
E024	chr9	120846732	120846803	TRUE	OK	42.5	0.017	0.8919	0.9741	-0.024	-0.012	44.4	28.2	29.2	32.8	69.5	51.2
E025	chr9	120846803	120846861	TRUE	OK	35.5	0.0081	0.4819	0.8499	0.186	0.093	26.6	21.9	29.2	34.7	56.8	43.5
E026	chr9	120846861	120847246	TRUE	OK	58.7	0.00499	0.07513	0.6707	0.357	0.179	51.3	28.2	40.3	61.6	83.2	88.0
E027	chr9	120847246	120847293	TRUE	OK	25.2	0.00698	0.1706	0.7443	0.390	0.195	20.7	14.6	15.1	27.8	33.3	39.6
E028	chr9	120847293	120847353	TRUE	OK	58.0	0.00485	0.2059	0.7599	0.249	0.124	54.2	34.4	35.3	63.5	85.2	75.4
E029	chr9	120848936	120848979	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.204	0.1542	NA	NA	NA	1.0	3.1	2.0	0.0	2.9	0.0
E030	chr9	120849922	120850006	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.227	0.8589	NA	NA	NA	5.9	0.0	1.0	4.0	1.0	2.9
E031	chr9	120850362	120850657	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.262	0.935	NA	NA	NA	9.9	0.0	1.0	4.0	2.9	3.9
E032	chr9	120851237	120851279	TRUE	OK	48.4	0.00519	0.01756	0.4724	0.518	0.259	37.5	24.0	30.2	55.6	77.4	65.7
E033	chr9	120851279	120851339	TRUE	OK	58.8	0.00376	0.008514	0.3691	0.512	0.256	41.4	32.3	38.3	73.5	82.3	85.1
E034	chr9	120851339	120851355	TRUE	OK	60.2	0.00369	0.2012	0.7585	0.241	0.120	50.3	35.5	43.3	69.5	79.3	83.1
E035	chr9	120851355	120851440	TRUE	OK	63.2	0.00561	0.4806	0.8496	0.133	0.066	64.1	33.4	44.3	64.5	83.2	89.9
E036	chr9	120851440	120851448	TRUE	OK	45.9	0.00761	0.3509	0.8077	-0.229	-0.115	54.2	32.3	32.2	49.6	47.0	59.9
E037	chr9	120851448	120851490	TRUE	OK	54.7	0.00511	0.3906	0.8206	-0.185	-0.092	60.1	39.6	39.3	60.6	59.7	68.6
E038	chr9	120851490	120851491	TRUE	OK	40.4	0.00556	0.03407	0.5705	-0.488	-0.244	49.3	34.4	31.2	39.7	41.1	46.4
E039	chr9	120851491	120851492	TRUE	OK	40.4	0.00556	0.03407	0.5705	-0.488	-0.244	49.3	34.4	31.2	39.7	41.1	46.4
E040	chr9	120851492	120851497	TRUE	OK	42.0	0.00619	0.02508	0.5256	-0.520	-0.260	52.3	36.5	32.2	43.7	41.1	46.4
E041	chr9	120851497	120851498	TRUE	OK	40.9	0.0053	0.02657	0.5345	-0.503	-0.251	48.3	36.5	32.2	40.7	41.1	46.4
E042	chr9	120851498	120851524	TRUE	OK	47.0	0.00424	0.02202	0.5066	-0.477	-0.238	51.3	41.7	40.3	45.7	49.9	53.2
E043	chr9	120851524	120851718	TRUE	OK	110.6	0.0034	0.5284	0.865	-0.098	-0.049	92.7	86.5	92.7	122.1	138.1	131.5
E044	chr9	120851718	120852603	TRUE	OK	271.6	0.00918	0.379	0.8165	0.170	0.085	193.3	189.8	225.6	283.9	380.9	355.8
E045	chr9	120852603	120854385	TRUE	OK	317.6	0.0147	0.5411	0.8692	0.132	0.066	265.2	270.1	187.3	337.5	398.6	446.7
J046	chr9	120824970	120844992	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J047	chr9	120842440	120847293	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J048	chr9	120843439	120844992	TRUE	OK	19.4	0.00786	0.4268	0.832	-0.243	-0.122	15.8	19.8	15.1	18.9	27.4	19.3
J049	chr9	120843439	120847293	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0204	0.9569	NA	NA	NA	4.9	4.2	2.0	4.0	5.9	6.8
J050	chr9	120844899	120844992	TRUE	OK	15.0	0.00906	0.2266	0.7676	0.440	0.220	10.8	12.5	6.0	13.9	22.5	24.2
J051	chr9	120845196	120846681	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.539	0.3852	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	0.0
J052	chr9	120845196	120847293	TRUE	OK	12.0	0.00965	0.453	0.8404	0.284	0.142	11.8	6.3	7.1	16.9	14.7	15.5
J053	chr9	120845473	120847293	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J054	chr9	120845620	120847293	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J055	chr9	120845826	120847293	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.256	0.6696	NA	NA	NA	0.0	1.0	1.0	2.0	0.0	0.0
J056	chr9	120845887	120847246	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J057	chr9	120845887	120847293	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.7884	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J058	chr9	120846803	120847293	FALSE	LOW_COUNTS_INDEP_FILTER	3.9	0.147	0.4181	NA	NA	NA	5.9	1.0	0.0	3.0	8.8	4.8
J059	chr9	120846861	120847293	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J060	chr9	120847353	120848936	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J061	chr9	120847353	120849922	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J062	chr9	120847353	120850362	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.79	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J063	chr9	120847353	120851237	TRUE	OK	37.1	0.0161	0.3848	0.8187	0.263	0.132	32.5	20.9	25.2	39.7	65.6	38.7
J064	chr9	120848979	120851237	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J065	chr9	120850006	120851237	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J066	chr9	120850657	120851237	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N067	chr9	120824685	120826764	TRUE	OK	207.5	0.0363	0.04929	0.6236	-0.720	-0.360	277.1	121.0	218.6	202.5	186.1	239.8
N068	chr9	120826907	120829098	TRUE	OK	394.6	0.0228	0.002462	0.2134	-0.835	-0.417	481.2	276.3	396.8	393.1	380.9	438.9
N069	chr9	120829208	120831330	TRUE	OK	440.6	0.012	1.08e-05	0.005881	-0.890	-0.445	517.7	342.0	429.1	437.8	432.8	484.4
N070	chr9	120831459	120831831	TRUE	OK	408.9	0.0135	8.132e-07	0.0006962	-1.046	-0.522	481.2	331.6	435.1	401.1	390.7	413.8
N071	chr9	120831945	120833311	TRUE	OK	325.4	0.0171	2.416e-05	0.0109	-0.988	-0.493	356.9	294.0	354.5	345.5	294.8	306.5
N072	chr9	120833456	120842736	TRUE	OK	353.2	0.0179	6.83e-05	0.0238	-0.965	-0.482	422.0	273.2	381.7	340.5	380.9	321.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000226752.9
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE